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Molecular and Cellular Biology Volume 30, 2010 - Issue 8
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Article

The Nematode Eukaryotic Translation Initiation Factor 4E/G Complex Works with a trans-Spliced Leader Stem-Loop To Enable Efficient Translation of Trimethylguanosine-Capped RNAs

Adam Wallace1 Department of Biochemistry and Molecular Genetics
,
Megan E. Filbin1 Department of Biochemistry and Molecular Genetics;2 Molecular Biology Program, University of Colorado School of Medicine, Aurora, Colorado80045
,
Bethany Veo1 Department of Biochemistry and Molecular Genetics
,
Craig McFarland1 Department of Biochemistry and Molecular Genetics
,
Janusz Stepinski3 Division of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, 02-089Warsaw, Poland
,
Marzena Jankowska-Anyszka4 Faculty of Chemistry, University of Warsaw, 02-093Warsaw, Poland
,
Edward Darzynkiewicz3 Division of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, 02-089Warsaw, Poland
&
Richard E. Davis1 Department of Biochemistry and Molecular Genetics;2 Molecular Biology Program, University of Colorado School of Medicine, Aurora, Colorado80045Correspondence[email protected]
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Pages 1958-1970 | Received 31 Oct 2009, Accepted 02 Feb 2010, Published online: 20 Mar 2023

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KLB Borden, B Culjkovic-Kraljacic & VH Cowling. (2021) To cap it all off, again: dynamic capping and recapping of coding and non-coding RNAs to control transcript fate and biological activity. Cell Cycle 20:14, pages 1347-1360.
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Ivan N. Shatsky, Sergey E. Dmitriev, Dmitri E. Andreev & Ilya M. Terenin. (2014) Transcriptome-wide studies uncover the diversity of modes of mRNA recruitment to eukaryotic ribosomes. Critical Reviews in Biochemistry and Molecular Biology 49:2, pages 164-177.
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Articles from other publishers (22)

Florian Bernard, Delphine Dargère, Oded Rechavi & Denis Dupuy. (2023) Quantitative analysis of C. elegans transcripts by Nanopore direct-cDNA sequencing reveals terminal hairpins in non trans-spliced mRNAs. Nature Communications 14:1.
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Jianbin Wang. (2021) Genomics of the Parasitic Nematode Ascaris and Its Relatives. Genes 12:4, pages 493.
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Joshua A Arribere, Hidehito Kuroyanagi & Heather A Hundley. (2020) mRNA Editing, Processing and Quality Control in Caenorhabditis elegans . Genetics 215:3, pages 531-568.
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Luciana Coutinho de Oliveira, Laurent Volpon, Amanda K. RahardjoMichael J. OsborneBiljana Culjkovic-KraljacicChristian TrahanMarlene Oeffinger, Benjamin H. KwokKatherine L. B. Borden. (2019) Structural studies of the eIF4E–VPg complex reveal a direct competition for capped RNA: Implications for translation. Proceedings of the National Academy of Sciences 116:48, pages 24056-24065.
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Filipe Santos Pereira-Dutra, Martin Cancela, Bruna Valandro Meneghetti, Henrique Bunselmeyer Ferreira, Karina Mariante Monteiro & Arnaldo Zaha. (2019) Functional characterization of the translation initiation factor eIF4E of Echinococcus granulosus. Parasitology Research 118:10, pages 2843-2855.
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Laurent Volpon, Michael J. Osborne & Katherine L.B. Borden. (2019) Biochemical and Structural Insights into the Eukaryotic Translation Initiation Factor eIF4E. Current Protein & Peptide Science 20:6, pages 525-535.
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Konstantin B. Blyuss, Farzad Fatehi, Victoria A. Tsygankova, Liudmyla O. Biliavska, Galyna O. Iutynska, Alla I. Yemets & Yaroslav B. Blume. (2019) RNAi-Based Biocontrol of Wheat Nematodes Using Natural Poly-Component Biostimulants. Frontiers in Plant Science 10.
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Stacey N. Barnes, Rick E. Masonbrink, Thomas R. Maier, Arun Seetharam, Anoop S. Sindhu, Andrew J. Severin & Thomas J. Baum. (2019) Heterodera glycines utilizes promiscuous spliced leaders and demonstrates a unique preference for a species-specific spliced leader over C. elegans SL1. Scientific Reports 9:1.
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Yu-Fei Yang, Xiaoqing Zhang, Xuehua Ma, Taolan Zhao, Qiushi Sun, Qing Huan, Shaohuan Wu, Zhuo Du & Wenfeng Qian. (2017) Trans -splicing enhances translational efficiency in C. elegans . Genome Research 27:9, pages 1525-1535.
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Vanessa Mondol, Byoung Chan Ahn & Amy E. Pasquinelli. (2015) Splicing remodels the let-7 primary microRNA to facilitate Drosha processing in Caenorhabditis elegans . RNA 21:8, pages 1396-1403.
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Karolina Piecyk, Anna Niedzwiecka, Aleksandra Ferenc-Mrozek, Maciej Lukaszewicz, Edward Darzynkiewicz & Marzena Jankowska-Anyszka. (2015) How to find the optimal partner—studies of snurportin 1 interactions with U snRNA 5′ TMG-cap analogues containing modified 2-amino group of 7-methylguanosine. Bioorganic & Medicinal Chemistry 23:15, pages 4660-4668.
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Alessandro Rossi, Eric J. Ross, Antonia Jack & Alejandro Sánchez Alvarado. (2014) Molecular cloning and characterization of SL3: A stem cell-specific SL RNA from the planarian Schmidtea mediterranea. Gene 533:1, pages 156-167.
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Marina de Moraes Mourao, Maina Bitar, Francisco Pereira Lobo, Ana Paula Peconick, Priscila Grynberg, Francisco Prosdocimi, Michael Waisberg, Gustavo Coutinho Cerqueira, Andrea Mara Macedo, Carlos Renato Machado, Timothy Yoshino & Gloria Regina Franco. (2013) A directed approach for the identification of transcripts harbouring the spliced leader sequence and the effect of trans-splicing knockdown in Schistosoma mansoni. Memórias do Instituto Oswaldo Cruz 108:6, pages 707-717.
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Karolina Piecyk, Richard E. Davis & Marzena Jankowska-Anyszka. (2012) Synthesis of N2-modified 7-methylguanosine 5′-monophosphates as nematode translation inhibitors. Bioorganic & Medicinal Chemistry 20:15, pages 4781-4789.
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Karolina Piecyk, Richard E. Davis & Marzena Jankowska-Anyszka. (2012) Synthesis of 13C- and 14C-labeled dinucleotide mRNA cap analogues for structural and biochemical studies. Bioorganic & Medicinal Chemistry Letters 22:13, pages 4391-4395.
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Weizhi Liu, Marzena Jankowska-Anyszka, Karolina Piecyk, Laura Dickson, Adam Wallace, Anna Niedzwiecka, Janusz Stepinski, Ryszard Stolarski, Edward Darzynkiewicz, Jeffrey Kieft, Rui Zhao, David N. M. Jones & Richard E. Davis. (2011) Structural basis for nematode eIF4E binding an m 2,2,7 G-Cap and its implications for translation initiation. Nucleic Acids Research 39:20, pages 8820-8832.
Crossref
Jianbin Wang, Benjamin Czech, Amanda Crunk, Adam Wallace, Makedonka Mitreva, Gregory J. Hannon & Richard E. Davis. (2011) Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles . Genome Research 21:9, pages 1462-1477.
Crossref
Erika L. Lasda & Thomas Blumenthal. (2011) Trans -splicing . Wiley Interdisciplinary Reviews: RNA 2:3, pages 417-434.
Crossref
Marzena Jankowska-Anyszka, Karolina Piecyk & Jelena Šamonina-Kosicka. (2011) Synthesis of a new class of ribose functionalized dinucleotide cap analogues for biophysical studies on interaction of cap-binding proteins with the 5′ end of mRNA. Organic & Biomolecular Chemistry 9:15, pages 5564.
Crossref
J. Jason Morton & Thomas Blumenthal. 2011. Caenorhabditis elegans: Molecular Genetics and Development. Caenorhabditis elegans: Molecular Genetics and Development 187 217 .
Neale Harrison, Andreas Kalbfleisch, Bernadette Connolly, Jonathan Pettitt & Berndt Müller. (2010) SL2-like spliced leader RNAs in the basal nematode Prionchulus punctatus : New insight into the evolution of nematode SL2 RNAs . RNA 16:8, pages 1500-1507.
Crossref
Jonathan PettittNeale HarrisonIan StansfieldBernadette ConnollyBerndt Müller. (2010) The evolution of spliced leader trans -splicing in nematodes . Biochemical Society Transactions 38:4, pages 1125-1130.
Crossref

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