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Molecular and Cellular Biology Volume 16, 1996 - Issue 5
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Research Article

Interactions among SR Proteins, an Exonic Splicing Enhancer, and a Lentivirus Rev Protein Regulate Alternative Splicing

Richard R. GontarekLaboratory of Leukocyte Biology, National Cancer Institute-Frederick Cancer Research and Development Center, Frederick, Maryland21702
&
David DerseLaboratory of Leukocyte Biology, National Cancer Institute-Frederick Cancer Research and Development Center, Frederick, Maryland21702Correspondence[email protected]
Pages 2325-2331 | Received 18 Oct 1995, Accepted 20 Feb 1996, Published online: 29 Mar 2023

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Supriya Sen, Indrani Talukdar & Nicholas J. G. Webster. (2009) SRp20 and CUG-BP1 Modulate Insulin Receptor Exon 11 Alternative Splicing. Molecular and Cellular Biology 29:3, pages 871-880.
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Michael Belshan, Gregory S. Park, Patricia Bilodeau, C. Martin Stoltzfus & Susan Carpenter. (2000) Binding of Equine Infectious Anemia Virus Rev to an Exon Splicing Enhancer Mediates Alternative Splicing and Nuclear Export of Viral mRNAs. Molecular and Cellular Biology 20:10, pages 3550-3557.
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Hong-Xiang Liu, Shern L. Chew, Luca Cartegni, Michael Q. Zhang & Adrian R. Krainer. (2000) Exonic Splicing Enhancer Motif Recognized by Human SC35 under Splicing Conditions. Molecular and Cellular Biology 20:3, pages 1063-1071.
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Cyril F. Bourgeois, Michel Popielarz, Georges Hildwein & James Stevenin. (1999) Identification of a Bidirectional Splicing Enhancer: Differential Involvement of SR Proteins in 5′ or 3′ Splice Site Activation. Molecular and Cellular Biology 19:11, pages 7347-7356.
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Akila Mayeda, Gavin R. Screaton, Sharon D. Chandler, Xiang-Dong Fu & Adrian R. Krainer. (1999) Substrate Specificities of SR Proteins in Constitutive Splicing Are Determined by Their RNA Recognition Motifs and Composite Pre-mRNA Exonic Elements. Molecular and Cellular Biology 19:3, pages 1853-1863.
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Anand Gersappe & David J. Pintel. (1999) CA- and Purine-Rich Elements Form a Novel Bipartite Exon Enhancer Which Governs Inclusion of the Minute Virus of Mice NS2-Specific Exon in Both Singly and Doubly Spliced mRNAs. Molecular and Cellular Biology 19:1, pages 364-375.
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Matthew E. Harris, Richard R. Gontarek, David Derse & Thomas J. Hope. (1998) Differential Requirements for Alternative Splicing and Nuclear Export Functions of Equine Infectious Anemia Virus Rev Protein. Molecular and Cellular Biology 18:7, pages 3889-3899.
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Lisa M. McNally & Mark T. McNally. (1998) An RNA Splicing Enhancer-Like Sequence Is a Component of a Splicing Inhibitor Element from Rous Sarcoma Virus. Molecular and Cellular Biology 18:6, pages 3103-3111.
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Volker Heinrichs, Lisa C. Ryner & Bruce S. Baker. (1998) Regulation of Sex-Specific Selection of fruitless 5′ Splice Sites by transformerand transformer-2. Molecular and Cellular Biology 18:1, pages 450-458.
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Lydia R. Coulter, Mark A. Landree & Thomas A. Cooper. (1997) Identification of a New Class of Exonic Splicing Enhancers by In Vivo Selection. Molecular and Cellular Biology 17:4, pages 2143-2150.
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Articles from other publishers (32)

Kiran Kumar Kolathur, Pallavi Sharma, Nagesh Y. Kadam, Navneet Shahi, Ane Nishitha, Kavita Babu & Shravan Kumar Mishra. (2022) The ubiquitin‐like protein Hub1/ UBL ‐5 functions in pre‐mRNA splicing in Caenorhabditis elegans . FEBS Letters 597:3, pages 448-457.
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Chunwei Cao, Ying Zhang, Qitao Jia, Xiao Wang, Qiantao Zheng, Hongyong Zhang, Ruigao Song, Yongshun Li, Ailing Luo, Qianlong Hong, Guosong Qin, Jing Yao, Nan Zhang, Yanfang Wang, Hongmei Wang, Qi Zhou & Jianguo Zhao. (2019) An exonic splicing enhancer mutation in DUOX2 causes aberrant alternative splicing and severe congenital hypothyroidism in Bama pigs . Disease Models & Mechanisms 12:1.
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Chijioke N Umunnakwe, Hyelee Loyd, Kinsey Cornick, Jerald R Chavez, Drena Dobbs & Susan Carpenter. (2014) Computational modeling suggests dimerization of equine infectious anemia virus Rev is required for RNA binding. Retrovirology 11:1.
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Olfa Siala, Ahmed Rebai & Faiza Fakhfakh. (2014) Slight variations in the SC35 ESE sequence motif among human chromosomes: a computational approach. Gene 545:1, pages 102-110.
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R.F. Cook, C. Leroux & C.J. Issel. (2013) Equine infectious anemia and equine infectious anemia virus in 2013: A review. Veterinary Microbiology 167:1-2, pages 181-204.
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Jae-Hyung Lee, Gloria Culver, Susan Carpenter & Drena Dobbs. (2008) Analysis of the EIAV Rev-Responsive Element (RRE) Reveals a Conserved RNA Motif Required for High Affinity Rev Binding in Both HIV-1 and EIAV. PLoS ONE 3:6, pages e2272.
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Alan W Cochrane, Mark T McNally & Andrew J Mouland. (2006) The retrovirus RNA trafficking granule: from birth to maturity. Retrovirology 3:1.
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Jae-Hyung Lee, Sean C. Murphy, Michael Belshan, Wendy O. Sparks, Yvonne Wannemuehler, Sijun Liu, Thomas J. Hope, Drena Dobbs & Susan Carpenter. (2006) Characterization of Functional Domains of Equine Infectious Anemia Virus Rev Suggests a Bipartite RNA-Binding Domain. Journal of Virology 80:8, pages 3844-3852.
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Huey-Jane Liao, Carl C Baker, Gerald L Princler & David Derse. (2004) cis-Acting and trans-acting modulation of equine infectious anemia virus alternative RNA splicing. Virology 323:1, pages 131-140.
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Zhi-Ming Zheng. (2004) Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression. Journal of Biomedical Science 11:3, pages 278-294.
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Gerald L Princler, John G Julias, Stephen H Hughes & David Derse. (2003) Roles of viral and cellular proteins in the expression of alternatively spliced HTLV-1 pX mRNAs11The content of this publication does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. Government.. Virology 317:1, pages 136-145.
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Rebeca Martı́nez-Contreras, José Manuel Galindo, Arturo Aguilar-Rojas & Jesús Valdés. (2003) Two exonic elements in the flanking constitutive exons control the alternative splicing of the α exon of the ZO-1 pre-mRNA. Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1630:2-3, pages 71-83.
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Elena A. Lesnik, Ranga Sampath & David J. Ecker. (2002) Rev response elements (RRE) in lentiviruses: An RNAMotif algorithm-based strategy for RRE prediction. Medicinal Research Reviews 22:6, pages 617-636.
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Kazuya Yoshimura, Yukinori Yabuta, Takahiro Ishikawa & Shigeru Shigeoka. (2002) Identification of a cis Element for Tissue-specific Alternative Splicing of Chloroplast Ascorbate Peroxidase Pre-mRNA in Higher Plants. Journal of Biological Chemistry 277:43, pages 40623-40632.
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Morisada Hayakawa, Eiji Sakashita, Eriko Ueno, Shin-ichi Tominaga, Toshiro Hamamoto, Yasuo Kagawa & Hitoshi Endo. (2002) Muscle-specific Exonic Splicing Silencer for Exon Exclusion in Human ATP Synthase γ-Subunit Pre-mRNA. Journal of Biological Chemistry 277:9, pages 6974-6984.
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Philippe-Emmanuel Mangeot, Karine Duperrier, Didier Nègre, Bertrand Boson, Dominique Rigal, François-Loıc Cosset & Jean-Luc Darlix. (2002) High Levels of Transduction of Human Dendritic Cells with Optimized SIV Vectors. Molecular Therapy 5:3, pages 283-290.
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Philip J. Smith, Emma L. Spurrell, John Coakley, Charles J. Hinds, Richard J. M. Ross, Adrian R. Krainer & Shern L. Chew. (2002) An Exonic Splicing Enhancer in Human IGF-I Pre-mRNA Mediates Recognition of Alternative Exon 5 by the Serine-Arginine Protein Splicing Factor-2/ Alternative Splicing Factor. Endocrinology 143:1, pages 146-154.
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Jonathan B. Rohll, Kyriacos A. Mitrophanous, Enca Martin-Rendon, Fiona M. Ellard, Pippa A. Radcliffe, Nicholas D. Mazarakis & Susan M. Kingsman. 2002. Gene Therapy Methods. Gene Therapy Methods 466 500 .
Hye-kyung Chung & David Derse. (2001) Binding Sites for Rev and ASF/SF2 Map to a 55-Nucleotide Purine-rich Exonic Element in Equine Infectious Anemia Virus RNA*. Journal of Biological Chemistry 276:22, pages 18960-18967.
Crossref
Wei Guo, Stanley C. Winistorfer & C. Martin Stoltzfus. (2000) Selective Inhibition of Splicing at the Avian Sarcoma Virus src 3′ Splice Site by Direct-Repeat Posttranscriptional cis Elements . Journal of Virology 74:18, pages 8513-8523.
Crossref
Wessel P. Dirksen, Xinlan Li, Akila Mayeda, Adrian R. Krainer & Fritz M. Rottman. (2000) Mapping the SF2/ASF Binding Sites in the Bovine Growth Hormone Exonic Splicing Enhancer. Journal of Biological Chemistry 275:37, pages 29170-29177.
Crossref
Rina Rosin-Arbesfeld, Abraham Yaniv & Arnona Gazit. (2000) Suboptimal splice sites of equine infectious anaemia virus control Rev responsiveness. Microbiology 81:5, pages 1265-1272.
Crossref
Shoji Mano, Makoto Hayashi & Mikio Nishimura. (1999) Light regulates alternative splicing of hydroxypyruvate reductase in pumpkin. The Plant Journal 17:3, pages 309-320.
Crossref
E. Labourier, E. Allemand, S. Brand, M. Fostier, J. Tazi & H.-M. Bourbon. (1999) Recognition of exonic splicing enhancer sequences by the Drosophila splicing repressor RSF1. Nucleic Acids Research 27:11, pages 2377-2386.
Crossref
Zhi Ming Zheng, Martijn Huynen & Carl C. Baker. (1998) A pyrimidine-rich exonic splicing suppressor binds multiple RNA splicing factors and inhibits spliceosome assembly. Proceedings of the National Academy of Sciences 95:24, pages 14088-14093.
Crossref
Hong-Xiang Liu, Michael Zhang & Adrian R. Krainer. (1998) Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. Genes & Development 12:13, pages 1998-2012.
Crossref
Michael Belshan, Matthew E. Harris, Anne E. Shoemaker, Thomas J. Hope & Susan Carpenter. (1998) Biological Characterization of Rev Variation in Equine Infectious Anemia Virus. Journal of Virology 72:5, pages 4421-4426.
Crossref
Wendy Maury. (1998) Regulation of equine infectious anemia virus expression. Journal of Biomedical Science 5:1, pages 11-23.
Crossref
Z M Zheng, P J He & C C Baker. (1997) Structural, functional, and protein binding analyses of bovine papillomavirus type 1 exonic splicing enhancers. Journal of Virology 71:12, pages 9096-9107.
Crossref
D Y HwangJ B Cohen. (1997) A splicing enhancer in the 3'-terminal c-H-ras exon influences mRNA abundance and transforming activity. Journal of Virology 71:9, pages 6416-6426.
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Douglas M. Powell, M. Catherine Amaral, Jane Y. Wu, Tom Maniatis & Warner C. Greene. (1997) HIV Rev-dependent binding of SF2/ASF to the Rev response element: Possible role in Rev-mediated inhibition of HIV RNA splicing. Proceedings of the National Academy of Sciences 94:3, pages 973-978.
Crossref
Benoit Chabot. (1996) Directing alternative splicing: cast and scenarios. Trends in Genetics 12:11, pages 472-478.
Crossref

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