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Research Article

An Exceptionally Conserved Transcriptional Repressor, CTCF, Employs Different Combinations of Zinc Fingers To Bind Diverged Promoter Sequences of Avian and Mammalian c-myc Oncogenes

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Pages 2802-2813 | Received 19 Sep 1995, Accepted 06 Mar 1996, Published online: 29 Mar 2023

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Parimal Majumder & Jeremy M. Boss. (2010) CTCF Controls Expression and Chromatin Architecture of the Human Major Histocompatibility Complex Class II Locus. Molecular and Cellular Biology 30:17, pages 4211-4223.
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Melissa J. MacPherson, Linda G. Beatty, Wenjing Zhou, Minjie Du & Paul D. Sadowski. (2009) The CTCF Insulator Protein Is Posttranslationally Modified by SUMO. Molecular and Cellular Biology 29:3, pages 714-725.
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Li Han, Dong-Hoon Lee & Piroska E. Szabó. (2008) CTCF Is the Master Organizer of Domain-Wide Allele-Specific Chromatin at the H19/Igf2 Imprinted Region. Molecular and Cellular Biology 28:3, pages 1124-1135.
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Denis Klochkov, Héctor Rincón-Arano, Elena S. Ioudinkova, Viviana Valadez-Graham, Alexey Gavrilov, Félix Recillas-Targa & Sergey V. Razin. (2006) A CTCF-Dependent Silencer Located in the Differentially Methylated Area May Regulate Expression of a Housekeeping Gene Overlapping a Tissue-Specific Gene Domain. Molecular and Cellular Biology 26:5, pages 1589-1597.
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Francine E. Garrett, Alexander V. Emelyanov, Manuel A. Sepulveda, Patrick Flanagan, Sabrina Volpi, Fubin Li, Dmitry Loukinov, Laurel A. Eckhardt, Victor V. Lobanenkov & Barbara K. Birshtein. (2005) Chromatin Architecture near a Potential 3′ End of the Igh Locus Involves Modular Regulation of Histone Modifications during B-Cell Development and In Vivo Occupancy at CTCF Sites. Molecular and Cellular Biology 25:4, pages 1511-1525.
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Vinod Pant, Sreenivasulu Kurukuti, Elena Pugacheva, Shaharum Shamsuddin, Piero Mariano, Rainer Renkawitz, Elena Klenova, Victor Lobanenkov & Rolf Ohlsson. (2004) Mutation of a Single CTCF Target Site within the H19 Imprinting Control Region Leads to Loss of Igf2 Imprinting and Complex Patterns of De Novo Methylation upon Maternal Inheritance. Molecular and Cellular Biology 24:8, pages 3497-3504.
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Wendy M. Gombert, Stephen D. Farris, Eric D. Rubio, Kristin M. Morey-Rosler, William H. Schubach & Anton Krumm. (2003) The c-myc Insulator Element and Matrix Attachment Regions Definethe c-myc ChromosomalDomain. Molecular and Cellular Biology 23:24, pages 9338-9348.
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Elena M. Klenova, Igor V. Chernukhin, Ayman El-Kady, Robin E. Lee, Elena M. Pugacheva, Dmitri I. Loukinov, Graham H. Goodwin, Dolores Delgado, Galina N. Filippova, Javier León, Herbert C. Morse$suffix/text()$suffix/text(), Paul E. Neiman & Victor V. Lobanenkov. (2001) Functional Phosphorylation Sites in the C-Terminal Region of the Multivalent Multifunctional Transcriptional Factor CTCF. Molecular and Cellular Biology 21:6, pages 2221-2234.
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Mark Shannon, Joomyeong Kim, Linda Ashworth, Elbert Branscomb & Lisa Stubbs. (1998) Tandem Zinc-Finger Gene Families in Mammals: Insights and Unanswered Questions. DNA Sequence 8:5, pages 303-315.
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Mark Burcin, Rüdiger Arnold, Marcus Lutz, Burkhard Kaiser, Dieter Runge, Friedrich Lottspeich, Galina N. Filippova, Victor V. Lobanenkov & Rainer Renkawitz. (1997) Negative Protein 1, Which Is Required for Function of the Chicken Lysozyme Gene Silencer in Conjunction with Hormone Receptors, Is Identical to the Multivalent Zinc Finger Repressor CTCF. Molecular and Cellular Biology 17:3, pages 1281-1288.
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
Marjon S. van Ruiten & Benjamin D. Rowland. (2021) On the choreography of genome folding: A grand pas de deux of cohesin and CTCF. Current Opinion in Cell Biology 70, pages 84-90.
Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
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Crossref
J. Tajbakhsh & J. Singh. 2021. Medical Epigenetics. Medical Epigenetics 529 558 .
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Crossref
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Crossref
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Crossref
Gongcheng Hu, Xiaotao Dong, Shixin Gong, Yawei Song, Andrew P Hutchins & Hongjie Yao. (2020) Systematic screening of CTCF binding partners identifies that BHLHE40 regulates CTCF genome-wide distribution and long-range chromatin interactions. Nucleic Acids Research 48:17, pages 9606-9620.
Crossref
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Crossref
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Crossref
Mengfan Li, Jingbo Gan, Yuao Sun, Zihan Xu, Junsheng Yang, Yujie Sun & Cheng Li. (2020) Architectural proteins for the formation and maintenance of the 3D genome. Science China Life Sciences 63:6, pages 795-810.
Crossref
Yuvia A. Pérez-Rico, Emmanuel Barillot & Alena Shkumatava. (2020) Demarcation of Topologically Associating Domains Is Uncoupled from Enriched CTCF Binding in Developing Zebrafish. iScience 23:5, pages 101046.
Crossref
Oliver Bechter & Patrick Schöffski. (2020) Make your best BET: The emerging role of BET inhibitor treatment in malignant tumors. Pharmacology & Therapeutics 208, pages 107479.
Crossref
Ariella B. Hanker, Dhivya R. Sudhan & Carlos L. Arteaga. (2020) Overcoming Endocrine Resistance in Breast Cancer. Cancer Cell 37:4, pages 496-513.
Crossref
Bing Gao, Wei Xie, Xueji Wu, Lei Wang & Jianping Guo. (2020) Functionally analyzing the important roles of hepatocyte nuclear factor 3 (FoxA) in tumorigenesis. Biochimica et Biophysica Acta (BBA) - Reviews on Cancer 1873:2, pages 188365.
Crossref
Jiaxing Fan, Wenzhi Du, Hui Zhang, Yunchao Wang, Kai Li, Yong Meng & Jianning Wang. (2019) Transcriptional downregulation of miR‐127‐3p by CTCF promotes prostate cancer bone metastasis by targeting PSMB5. FEBS Letters 594:3, pages 466-476.
Crossref
Amber W. Wang, Yue J. Wang, Adam M. Zahm, Ashleigh R. Morgan, Kirk J. Wangensteen & Klaus H. Kaestner. (2020) The Dynamic Chromatin Architecture of the Regenerating Liver. Cellular and Molecular Gastroenterology and Hepatology 9:1, pages 121-143.
Crossref
Éléa Héberlé & Anaïs Flore Bardet. (2019) Sensitivity of transcription factors to DNA methylation. Essays in Biochemistry 63:6, pages 727-741.
Crossref
Gang Ren & Keji Zhao. (2019) CTCF and cellular heterogeneity. Cell & Bioscience 9:1.
Crossref
Michael P. Martinez, Xiaogang Cheng, Ancy Joseph, Jacob Al-Saleem, Amanda R. Panfil, Marilly Palettas, Wessel P. Dirksen, Lee Ratner & Patrick L. Green. (2019) HTLV-1 CTCF-binding site is dispensable for in vitro immortalization and persistent infection in vivo. Retrovirology 16:1.
Crossref
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Crossref
Wan-Xin Peng, Rong-Zhang He, Ziqiang Zhang, Liu Yang & Yin-Yuan Mo. (2019) LINC00346 promotes pancreatic cancer progression through the CTCF-mediated Myc transcription. Oncogene 38:41, pages 6770-6780.
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Patrick Sin-Chan, Iqra Mumal, Tannu Suwal, Ben Ho, Xiaolian Fan, Irtisha Singh, Yuchen Du, Mei Lu, Neilket Patel, Jonathon Torchia, Dean Popovski, Maryam Fouladi, Paul Guilhamon, Jordan R. Hansford, Sarah Leary, Lindsey M. Hoffman, Jean M. Mulcahy Levy, Alvaro Lassaletta, Palma Solano-Paez, Eloy Rivas, Alyssa Reddy, G. Yancey Gillespie, Nalin Gupta, Timothy E. Van Meter, Hideo Nakamura, Tai-Tong Wong, Young-Shin Ra, Seung-Ki Kim, Luca Massimi, Richard G. Grundy, Jason Fangusaro, Donna Johnston, Jennifer Chan, Lucie Lafay-Cousin, Eugene I. Hwang, Yin Wang, Daniel Catchpoole, Jean Michaud, Benjamin Ellezam, Ramya Ramanujachar, Holly Lindsay, Michael D. Taylor, Cynthia E. Hawkins, Eric Bouffet, Nada Jabado, Sheila K. Singh, Claudia L. Kleinman, Dalia Barsyte-Lovejoy, Xiao-Nan Li, Peter B. Dirks, Charles Y. Lin, Stephen C. Mack, Jeremy N. Rich & Annie Huang. (2019) A C19MC-LIN28A-MYCN Oncogenic Circuit Driven by Hijacked Super-enhancers Is a Distinct Therapeutic Vulnerability in ETMRs: A Lethal Brain Tumor. Cancer Cell 36:1, pages 51-67.e7.
Crossref
Emre Fertan, Gloria J. Rodrigues, Ryan V. Wheeler, Donna Goguen, Aimee A. Wong, Hana James, Andrew Stadnyk, Richard E. Brown & Ian C.G. Weaver. (2019) Cognitive Decline, Cerebral-Spleen Tryptophan Metabolism, Oxidative Stress, Cytokine Production, and Regulation of the Txnip Gene in a Triple Transgenic Mouse Model of Alzheimer Disease. The American Journal of Pathology 189:7, pages 1435-1450.
Crossref
Niaz Mahmood & Shafaat A. Rabbani. (2019) DNA Methylation Readers and Cancer: Mechanistic and Therapeutic Applications. Frontiers in Oncology 9.
Crossref
Michal Lazniewski, Wayne K. Dawson, Anna Maria Rusek & Dariusz Plewczynski. (2019) One protein to rule them all: The role of CCCTC-binding factor in shaping human genome in health and disease. Seminars in Cell & Developmental Biology 90, pages 114-127.
Crossref
Luca Braccioli & Elzo de Wit. (2019) CTCF: a Swiss-army knife for genome organization and transcription regulation. Essays in Biochemistry 63:1, pages 157-165.
Crossref
Fei Chen, Haiming Yuan, Wenyong Wu, Shaoke Chen, Qi Yang, Jin Wang, Qiang Zhang, Baohen Gui, Xin Fan, Ruimin Chen & Yiping Shen. (2019) Three additional de novo CTCF mutations in Chinese patients help to define an emerging neurodevelopmental disorder . American Journal of Medical Genetics Part C: Seminars in Medical Genetics.
Crossref
Ha Youn Shin. (2018) The structural and functional roles of CTCF in the regulation of cell type-specific and human disease-associated super-enhancers. Genes & Genomics 41:3, pages 257-265.
Crossref
Maria Michela Marino, Camilla Rega, Rosita Russo, Mariangela Valletta, Maria Teresa Gentile, Sabrina Esposito, Ilaria Baglivo, Italia De Feis, Claudia Angelini, Tioajiang Xiao, Gary Felsenfeld, Angela Chambery & Paolo Vincenzo Pedone. (2019) Interactome mapping defines BRG1, a component of the SWI/SNF chromatin remodeling complex, as a new partner of the transcriptional regulator CTCF. Journal of Biological Chemistry 294:3, pages 861-873.
Crossref
Sarah J. Aitken, Ximena Ibarra-Soria, Elissavet Kentepozidou, Paul Flicek, Christine Feig, John C. Marioni & Duncan T. Odom. (2018) CTCF maintains regulatory homeostasis of cancer pathways. Genome Biology 19:1.
Crossref
Min Wang, Timothy P. Hancock, Amanda J. Chamberlain, Christy J. Vander Jagt, Jennie E. Pryce, Benjamin G. Cocks, Mike E. Goddard & Benjamin J. Hayes. (2018) Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits. BMC Genomics 19:1.
Crossref
Thijessen Naidoo, Per Sjödin, Carina Schlebusch & Mattias Jakobsson. (2018) Patterns of variation in cis-regulatory regions: examining evidence of purifying selection. BMC Genomics 19:1.
Crossref
Jeetendra Nag & Rachel Bar-Shavit. (2018) Transcriptional Landscape of PARs in Epithelial Malignancies. International Journal of Molecular Sciences 19:11, pages 3451.
Crossref
Jingjing Guo, Ni Li, Jiexiong Han, Fei Pei, Tianyu Wang, Duo Lu & Jiandong Jiang. (2018) DNA recognition patterns of the multi-zinc-finger protein CTCF: a mutagenesis study. Acta Pharmaceutica Sinica B 8:6, pages 900-908.
Crossref
Xiaoji SunXuya WangZuojian TangMark GrivainisDavid Kahler, Chi Yun, Paolo MitaDavid FenyöJef D. Boeke. (2018) Transcription factor profiling reveals molecular choreography and key regulators of human retrotransposon expression. Proceedings of the National Academy of Sciences 115:24.
Crossref
Marjon S. van Ruiten & Benjamin D. Rowland. (2018) SMC Complexes: Universal DNA Looping Machines with Distinct Regulators. Trends in Genetics 34:6, pages 477-487.
Crossref
Somi Kim, Nam-Kyung Yu, Kyu-Won Shim, Ji-il Kim, Hyopil Kim, Dae Hee Han, Ja Eun Choi, Seung-Woo Lee, Dong Il Choi, Myung Won Kim, Dong-Sung Lee, Kyungmin Lee, Niels Galjart, Yong-Seok Lee, Jae-Hyung Lee & Bong-Kiun Kaang. (2018) Remote Memory and Cortical Synaptic Plasticity Require Neuronal CCCTC-Binding Factor (CTCF). The Journal of Neuroscience 38:22, pages 5042-5052.
Crossref
Jurian Schuijers, John Colonnese Manteiga, Abraham Selby Weintraub, Daniel Sindt Day, Alicia Viridiana Zamudio, Denes Hnisz, Tong Ihn Lee & Richard Allen Young. (2018) Transcriptional Dysregulation of MYC Reveals Common Enhancer-Docking Mechanism. Cell Reports 23:2, pages 349-360.
Crossref
Lissania Guerra-Calderas, Rodrigo González-Barrios, Carlos César Patiño, Nicolás Alcaraz, Marisol Salgado-Albarrán, David Cantú de León, Clementina Castro Hernández, Yesennia Sánchez-Pérez, Héctor Aquiles Maldonado-Martínez, Inti A. De la Rosa-Velazquez, Fernanda Vargas-Romero, Luis A. Herrera, Alejandro García-Carrancá & Ernesto Soto-Reyes. (2018) CTCF-KDM4A complex correlates with histone modifications that negatively regulate CHD5 gene expression in cancer cell lines . Oncotarget 9:24, pages 17028-17042.
Crossref
Salvatore Loguercio, E. Mauricio Barajas-Mora, Han-Yu Shih, Michael S. Krangel & Ann J. Feeney. (2018) Variable Extent of Lineage-Specificity and Developmental Stage-Specificity of Cohesin and CCCTC-Binding Factor Binding Within the Immunoglobulin and T Cell Receptor Loci. Frontiers in Immunology 9.
Crossref
Jennifer S. Lee, Priya Raja, Dongli Pan, Jean M. Pesola, Donald M. Coen & David M. Knipe. (2018) CCCTC-Binding Factor Acts as a Heterochromatin Barrier on Herpes Simplex Viral Latent Chromatin and Contributes to Poised Latent Infection. mBio 9:1.
Crossref
Ziarih Hawi, Janette Tong, Callum Dark, Hannah Yates, Beth Johnson & Mark A. Bellgrove. (2017) The role of cadherin genes in five major psychiatric disorders: A literature update. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics 177:2, pages 168-180.
Crossref
Fatma Bastaki, Pratibha Nair, Madiha Mohamed, Ethar Mustafa Malik, Mustafa Helmi, Mahmoud Taleb Al-Ali & Abdul Rezzak Hamzeh. (2017) Identification of a novel CTCF mutation responsible for syndromic intellectual disability – a case report. BMC Medical Genetics 18:1.
Crossref
Juan AusióPhilippe T. Georgel. (2017) MeCP2 and CTCF: enhancing the cross-talk of silencers. Biochemistry and Cell Biology 95:6, pages 593-608.
Crossref
Ikumi Hori, Rie Kawamura, Kazuhiko Nakabayashi, Hidetaka Watanabe, Ken Higashimoto, Junko Tomikawa, Daisuke Ieda, Kei Ohashi, Yutaka Negishi, Ayako Hattori, Yoshitsugu Sugio, Keiko Wakui, Kenichiro Hata, Hidenobu Soejima, Kenji Kurosawa & Shinji Saitoh. (2017) CTCF deletion syndrome: clinical features and epigenetic delineation . Journal of Medical Genetics 54:12, pages 836-842.
Crossref
Bin Zhang, Yajing Zhang, Xiaoping Zou, Anthony WH Chan, Rui Zhang, Terence Kin-Wah Lee, Hang Liu, Eunice Yuen-Ting Lau, Nicole Pui-Yu Ho, Paul BS Lai, Yue-Sun Cheung, Ka-Fai To, Hoi Kin Wong, Kwong Wai Choy, Vincent W Keng, Larry MC Chow, Kenrick KY Chan, Alfred S Cheng & Ben CB Ko. (2017) The CCCTC-binding factor (CTCF)-forkhead box protein M1 axis regulates tumour growth and metastasis in hepatocellular carcinoma. The Journal of Pathology 243:4, pages 418-430.
Crossref
Heidi K. Norton & Jennifer E. Phillips-Cremins. (2017) Crossed wires: 3D genome misfolding in human disease. Journal of Cell Biology 216:11, pages 3441-3452.
Crossref
Arantxa Pérez-García, Ester Marina-Zárate, Ángel F. Álvarez-Prado, Jose M. Ligos, Niels Galjart & Almudena R. Ramiro. (2017) CTCF orchestrates the germinal centre transcriptional program and prevents premature plasma cell differentiation. Nature Communications 8:1.
Crossref
Khalid Hilmi, Maïka JangalMaud Marques, Tiejun ZhaoAmine SaadChenxi Zhang, Vincent M. Luo, Alasdair Syme, Carlis RejonZhenbao YuAsiev Krum, Marc R. FabianStéphane RichardMoulay Alaoui-JamaliAlexander OrthweinLuke McCaffreyMichael Witcher. (2017) CTCF facilitates DNA double-strand break repair by enhancing homologous recombination repair. Science Advances 3:5.
Crossref
Emily L. Rossi, Sarah M. Dunlap, Laura W. Bowers, Subreen A. Khatib, Steven S. Doerstling, Laura A. Smith, Nikki A. Ford, Darcy Holley, Powel H. Brown, Marcos R. Estecio, Donna F. Kusewitt, Linda A. deGraffenried, Scott J. Bultman & Stephen D. Hursting. (2017) Energy Balance Modulation Impacts Epigenetic Reprogramming, ERα and ERβ Expression, and Mammary Tumor Development in MMTV-neu Transgenic Mice. Cancer Research 77:9, pages 2500-2511.
Crossref
Harsha Agarwal, Matthias Reisser, Celina Wortmann & J. Christof M. Gebhardt. (2017) Direct Observation of Cell-Cycle-Dependent Interactions between CTCF and Chromatin. Biophysical Journal 112:10, pages 2051-2055.
Crossref
Matthew Rea, Meredith Eckstein, Rebekah Eleazer, Caroline Smith & Yvonne N. Fondufe-Mittendorf . (2017) Genome-wide DNA methylation reprogramming in response to inorganic arsenic links inhibition of CTCF binding, DNMT expression and cellular transformation. Scientific Reports 7:1.
Crossref
Samuel Rivero-Hinojosa, Sungyun Kang, Victor V. Lobanenkov & Gabriel E. Zentner. (2017) Testis-specific transcriptional regulators selectively occupy BORIS-bound CTCF target regions in mouse male germ cells. Scientific Reports 7:1.
Crossref
Sven A Sewitz, Zahra Fahmi & Karen Lipkow. (2017) Higher order assembly: folding the chromosome. Current Opinion in Structural Biology 42, pages 162-168.
Crossref
Ole Ammerpohl, Martina Deckert & Manuel Montesinos-Rongen. (2017) Das Tumorepigenom – von der Genregulation über die Tumorklassifikation zum Therapietarget. Medizinische Genetik 28:4, pages 424-434.
Crossref
Guipeng Li, Yang Chen, Michael P. Snyder & Michael Q. Zhang. (2017) ChIA-PET2: a versatile and flexible pipeline for ChIA-PET data analysis. Nucleic Acids Research 45:1, pages e4-e4.
Crossref
Joanna Achinger-Kawecka & Susan J Clark. (2017) Disruption of the 3D cancer genome blueprint. Epigenomics 9:1, pages 47-55.
Crossref
Ines Pinheiro & Edith Heard. (2017) X chromosome inactivation: new players in the initiation of gene silencing. F1000Research 6, pages 344.
Crossref
Erandi Ayala-Ortega, Rodrigo Arzate-Mejía, Rosario Pérez-Molina, Edgar González-Buendía, Karin Meier, Georgina Guerrero & Félix Recillas-Targa. (2016) Epigenetic silencing of miR-181c by DNA methylation in glioblastoma cell lines. BMC Cancer 16:1.
Crossref
Jonathon Torchia, Brian Golbourn, Shengrui Feng, King Ching Ho, Patrick Sin-Chan, Alexandre Vasiljevic, Joseph D. Norman, Paul Guilhamon, Livia Garzia, Natalia R. Agamez, Mei Lu, Tiffany S. Chan, Daniel Picard, Pasqualino de Antonellis, Dong-Anh Khuong-Quang, Aline C. Planello, Constanze Zeller, Dalia Barsyte-Lovejoy, Lucie Lafay-Cousin, Louis Letourneau, Mathieu Bourgey, Man Yu, Deena M.A. Gendoo, Misko Dzamba, Mark Barszczyk, Tiago Medina, Alexandra N. Riemenschneider, A. Sorana Morrissy, Young-Shin Ra, Vijay Ramaswamy, Marc Remke, Christopher P. Dunham, Stephen Yip, Ho-keung Ng, Jian-Qiang Lu, Vivek Mehta, Steffen Albrecht, Jose Pimentel, Jennifer A. Chan, Gino R. Somers, Claudia C. Faria, Lucia Roque, Maryam Fouladi, Lindsey M. Hoffman, Andrew S. Moore, Yin Wang, Seung Ah Choi, Jordan R. Hansford, Daniel Catchpoole, Diane K. Birks, Nicholas K. Foreman, Doug Strother, Almos Klekner, Laszló Bognár, Miklós Garami, Péter Hauser, Tibor Hortobágyi, Beverly Wilson, Juliette Hukin, Anne-Sophie Carret, Timothy E. Van Meter, Eugene I. Hwang, Amar Gajjar, Shih-Hwa Chiou, Hideo Nakamura, Helen Toledano, Iris Fried, Daniel Fults, Takafumi Wataya, Chris Fryer, David D. Eisenstat, Katrin Scheinemann, Adam J. Fleming, Donna L. Johnston, Jean Michaud, Shayna Zelcer, Robert Hammond, Samina Afzal, David A. Ramsay, Nongnuch Sirachainan, Suradej Hongeng, Noppadol Larbcharoensub, Richard G. Grundy, Rishi R. Lulla, Jason R. Fangusaro, Harriet Druker, Ute Bartels, Ronald Grant, David Malkin, C. Jane McGlade, Theodore Nicolaides, Tarik Tihan, Joanna Phillips, Jacek Majewski, Alexandre Montpetit, Guillaume Bourque, Gary D. Bader, Alyssa T. Reddy, G. Yancey Gillespie, Monika Warmuth-Metz, Stefan Rutkowski, Uri Tabori, Mathieu Lupien, Michael Brudno, Ulrich Schüller, Torsten Pietsch, Alexander R. Judkins, Cynthia E. Hawkins, Eric Bouffet, Seung-Ki Kim, Peter B. Dirks, Michael D. Taylor, Anat Erdreich-Epstein, Cheryl H. Arrowsmith, Daniel D. De Carvalho, James T. Rutka, Nada Jabado & Annie Huang. (2016) Integrated (epi)-Genomic Analyses Identify Subgroup-Specific Therapeutic Targets in CNS Rhabdoid Tumors. Cancer Cell 30:6, pages 891-908.
Crossref
Jin Xu, Robert C. Spitale, Linna Guan, Ryan A. Flynn, Eduardo A. Torre, Rui Li, Inbar Raber, Kun Qu, Dale Kern, Helen E. Knaggs, Howard Y. Chang & Anne Lynn S. Chang. (2016) Novel Gene Expression Profile of Women with Intrinsic Skin Youthfulness by Whole Transcriptome Sequencing. PLOS ONE 11:11, pages e0165913.
Crossref
Li-Ming Ma, Zi-Rui Liang, Ke-Ren Zhou, Hui Zhou & Liang-Hu Qu. (2016) 27-Hydroxycholesterol increases Myc protein stability via suppressing PP2A, SCP1 and FBW7 transcription in MCF-7 breast cancer cells. Biochemical and Biophysical Research Communications 480:3, pages 328-333.
Crossref
Francine Rezzoug, Shelia D. Thomas, Eric C. Rouchka & Donald M. Miller. (2016) Discovery of a Family of Genomic Sequences Which Interact Specifically with the c-MYC Promoter to Regulate c-MYC Expression. PLOS ONE 11:8, pages e0161588.
Crossref
Sangkyu Kim, Leann Myers, Eric Ravussin, Katie E. Cherry & S. Michal Jazwinski. (2016) Single nucleotide polymorphisms linked to mitochondrial uncoupling protein genes UCP2 and UCP3 affect mitochondrial metabolism and healthy aging in female nonagenarians. Biogerontology 17:4, pages 725-736.
Crossref
X Zhao, D Li, J Pu, H Mei, D Yang, X Xiang, H Qu, K Huang, L Zheng & Q Tong. (2015) CTCF cooperates with noncoding RNA MYCNOS to promote neuroblastoma progression through facilitating MYCN expression. Oncogene 35:27, pages 3565-3576.
Crossref
Isaac Adeyemi Babarinde & Naruya Saitou. (2016) Genomic Locations of Conserved Noncoding Sequences and Their Proximal Protein-Coding Genes in Mammalian Expression Dynamics. Molecular Biology and Evolution 33:7, pages 1807-1817.
Crossref
Jonathan A. Beagan & Jennifer E. Phillips‐Cremins. (2016) CRISPR /Cas9 genome editing throws descriptive 3‐D genome folding studies for a loop . WIREs Systems Biology and Medicine 8:4, pages 286-299.
Crossref
Soo Seok Hwang, Lark Kyun Kim, Gap Ryol Lee & Richard A. Flavell. (2016) Role of OCT-1 and partner proteins in T cell differentiation. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1859:6, pages 825-831.
Crossref
Haiyan Huang & Qiang Wu. (2016) CRISPR Double Cutting through the Labyrinthine Architecture of 3D Genomes. Journal of Genetics and Genomics 43:5, pages 273-288.
Crossref
Rodolfo Ghirlando & Gary Felsenfeld. (2016) CTCF: making the right connections. Genes & Development 30:8, pages 881-891.
Crossref
Anna Kazanets, Tatiana Shorstova, Khalid Hilmi, Maud Marques & Michael Witcher. (2016) Epigenetic silencing of tumor suppressor genes: Paradigms, puzzles, and potential. Biochimica et Biophysica Acta (BBA) - Reviews on Cancer 1865:2, pages 275-288.
Crossref
Robert J. Lake, Erica L. Boetefuer, Kyoung-Jae Won & Hua-Ying Fan. (2016) The CSB chromatin remodeler and CTCF architectural protein cooperate in response to oxidative stress. Nucleic Acids Research 44:5, pages 2125-2135.
Crossref
Duncan T Odom. (2016) One for all. eLife 5.
Crossref
William A. MacDonaldSaqib S. SachaniCarlee R. WhiteMellissa R.W. Mann. (2016) A role for chromatin topology in imprinted domain regulation. Biochemistry and Cell Biology 94:1, pages 43-55.
Crossref
J. Tajbakhsh & J. Singh. 2016. Medical Epigenetics. Medical Epigenetics 555 583 .
Shih-Wen Chang, Wan-Ru Chao, Alexandra Ruan, Po-Hui Wang, Jau-Chen Lin & Chih-Ping Han. (2015) A promising hypothesis of c-KIT methylation/ expression paradox in c-KIT (+) squamous cell carcinoma of uterine cervix ----- CTCF transcriptional repressor regulates c-KIT proto-oncogene expression. Diagnostic Pathology 10:1.
Crossref
Artem Bonchuk, Oksana Maksimenko, Olga Kyrchanova, Tatyana Ivlieva, Vladic Mogila, Girish Deshpande, Daniel Wolle, Paul Schedl & Pavel Georgiev. (2015) Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster. BMC Biology 13:1.
Crossref
Matteo Vietri Rudan & Suzana Hadjur. (2015) Genetic Tailors: CTCF and Cohesin Shape the Genome During Evolution. Trends in Genetics 31:11, pages 651-660.
Crossref
Muhammad Mustafa, Ji-Yeon Lee & Myoung Hee Kim. (2015) CTCF negatively regulates HOXA10 expression in breast cancer cells. Biochemical and Biophysical Research Communications 467:4, pages 828-834.
Crossref
James Fraser, Iain Williamson, Wendy A. Bickmore & Josée Dostie. (2015) An Overview of Genome Organization and How We Got There: from FISH to Hi-C. Microbiology and Molecular Biology Reviews 79:3, pages 347-372.
Crossref
Musinu Zakari, Kobe Yuen & Jennifer L. Gerton. (2015) Etiology and pathogenesis of the cohesinopathies. Wiley Interdisciplinary Reviews: Developmental Biology 4:5, pages 489-504.
Crossref
Ifeoma Jane Nwigwe, Yoon Jung Kim, David A. Wacker & Tae Hoon Kim. (2015) Boundary Associated Long Noncoding RNA Mediates Long-Range Chromosomal Interactions. PLOS ONE 10:8, pages e0136104.
Crossref
Matthew T. Maurano, Hao Wang, Sam John, Anthony Shafer, Theresa Canfield, Kristen Lee & John A. Stamatoyannopoulos. (2015) Role of DNA Methylation in Modulating Transcription Factor Occupancy. Cell Reports 12:7, pages 1184-1195.
Crossref
Asima Zia, Attya Bhatti, Peter John & Aysha Karim Kiani. (2015) Data interpretation: deciphering the biological function of Type 2 diabetes associated risk loci. Acta Diabetologica 52:4, pages 789-800.
Crossref
Ieisha Pentland & Joanna Parish. (2015) Targeting CTCF to Control Virus Gene Expression: A Common Theme amongst Diverse DNA Viruses. Viruses 7:7, pages 3574-3585.
Crossref
Olaf Karl Klinke, Tuba Mizani, Gouri Baldwin, Brigitte Bancel, Mojgan Devouassoux-Shisheboran, Jean-Yves Scoazec, Pierre-Paul Bringuier, Regina Feederle, Anna Jauch, Katrin Hinderhofer, Philippe Taniere & Henri-Jacques Delecluse. (2015) KIT Mutation and Loss of 14q May Be Sufficient for the Development of Clinically Symptomatic Very Low-Risk GIST. PLOS ONE 10:6, pages e0130149.
Crossref
Somi Kim, Nam-Kyung Yu & Bong-Kiun Kaang. (2015) CTCF as a multifunctional protein in genome regulation and gene expression. Experimental & Molecular Medicine 47:6, pages e166-e166.
Crossref
Christian Paris, Ieisha Pentland, Ian Groves, David C. Roberts, Simon J. Powis, Nicholas Coleman, Sally Roberts & Joanna L. Parish. (2015) CCCTC-Binding Factor Recruitment to the Early Region of the Human Papillomavirus 18 Genome Regulates Viral Oncogene Expression. Journal of Virology 89:9, pages 4770-4785.
Crossref
M. Amiri Roudbar, H. Dehghani, M. Tahmoorespur, A. Zahmatkesh, H. Adeldust, S. Ansari Majd & M. Daliri Joupari. (2015) Quantitative analysis of RNA abondance for CTCF during reprogramming of bovine embryo from oocyte to blastocyst. Archives Animal Breeding 58:1, pages 171-175.
Crossref
Matteo Vietri Rudan, Christopher Barrington, Stephen Henderson, Christina Ernst, Duncan T. Odom, Amos Tanay & Suzana Hadjur. (2015) Comparative Hi-C Reveals that CTCF Underlies Evolution of Chromosomal Domain Architecture. Cell Reports 10:8, pages 1297-1309.
Crossref
Ethika Tyagi, Yumei Zhuang, Rahul Agrawal, Zhe Ying & Fernando Gomez-Pinilla. (2015) Interactive actions of Bdnf methylation and cell metabolism for building neural resilience under the influence of diet. Neurobiology of Disease 73, pages 307-318.
Crossref
Han Zhang, Lin Zhu, Huacheng He, Shanshan Zhu, Wei Zhang, Xiao Liu, Xiaoxi Zhao, Chao Gao, Mei Mei, Shilai Bao & Huyong Zheng. (2014) NF-kappa B mediated Up-regulation of CCCTC-binding factor in pediatric acute lymphoblastic leukemia. Molecular Cancer 13:1.
Crossref
Maurício M. Franco, Adam R. Prickett & Rebecca J. Oakey. (2014) The Role of CCCTC-Binding Factor (CTCF) in Genomic Imprinting, Development, and Reproduction1. Biology of Reproduction 91:5.
Crossref
Da WangChanglong LiXuemei Zhang. (2014) The Promoter Methylation Status and mRNA Expression Levels of CTCF and SIRT6 in Sporadic Breast Cancer . DNA and Cell Biology 33:9, pages 581-590.
Crossref
Sowmya Jairam & Howard J. Edenberg. (2014) An enhancer-blocking element regulates the cell-specific expression of alcohol dehydrogenase 7. Gene 547:2, pages 239-244.
Crossref
Jutta Vogelmann, Antoine Le Gall, Stephanie Dejardin, Frederic Allemand, Adrien Gamot, Gilles Labesse, Olivier Cuvier, Nicolas Nègre, Martin Cohen-Gonsaud, Emmanuel Margeat & Marcelo Nöllmann. (2014) Chromatin Insulator Factors Involved in Long-Range DNA Interactions and Their Role in the Folding of the Drosophila Genome. PLoS Genetics 10:8, pages e1004544.
Crossref
Cassandra Mostocotto, Mariarosaria Carbone, Cecilia Battistelli, Agnese Ciotti, Paolo Amati & Rossella Maione. (2014) Poly(ADP-Ribosyl)ation Is Required to Modulate Chromatin Changes at c-MYC Promoter during Emergence from Quiescence. PLoS ONE 9:7, pages e102575.
Crossref
E. S. Kotova, S. B. Akopov, E. D. Sverdlov & L. G. Nikolaev. (2014) Transcription factor CTCF and mammalian genome organization. Biopolymers and Cell 30:4, pages 260-272.
Crossref
Renata Novak Kujundžić, Ivana Grbeša, Mirko Ivkić, Božo Krušlin, Paško Konjevoda & Koraljka Gall Trošelj. (2014) Possible Prognostic Value of BORIS Transcript Variants Ratio in Laryngeal Squamous Cell Carcinomas – a Pilot Study. Pathology & Oncology Research 20:3, pages 687-695.
Crossref
Qiuying Liu, Bo Yang, Xiaoyan Xie, Ling Wei, Wenquan Liu, Wenli Yang, Yajun Ge, Qiang Zhu, Junzhe Zhang, Lei Jiang, Xiaoqin Yu, Wenyan Shen, Ran Li, Xuejiao Shi, Bo Li & Yang Qin. (2014) Vigilin interacts with CCCTC-binding factor (CTCF) and is involved in CTCF-dependent regulation of the imprinted genes Igf2 and H19 . FEBS Journal 281:12, pages 2713-2725.
Crossref
Italo Tempera & Paul M. Lieberman. (2014) Epigenetic regulation of EBV persistence and oncogenesis. Seminars in Cancer Biology 26, pages 22-29.
Crossref
Peter Heger & Thomas Wiehe. (2014) New tools in the box: An evolutionary synopsis of chromatin insulators. Trends in Genetics 30:5, pages 161-171.
Crossref
Ricardo Saldaña-Meyer, Edgar González-Buendía, Georgina Guerrero, Varun Narendra, Roberto Bonasio, Félix Recillas-Targa & Danny Reinberg. (2014) CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53. Genes & Development 28:7, pages 723-734.
Crossref
Ashley M. Wood, Arturo G. Garza-Gongora & Steven T. Kosak. (2014) A Crowdsourced nucleus: Understanding nuclear organization in terms of dynamically networked protein function. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1839:3, pages 178-190.
Crossref
Erling A. Hoivik, Kanthida Kusonmano, Mari K. Halle, Anna Berg, Elisabeth Wik, Henrica M. J. Werner, Kjell Petersen, Anne M. Oyan, Karl-Henning Kalland, Camilla Krakstad, Jone Trovik, Martin Widschwendter & Helga B. Salvesen. (2014) Hypomethylation of the CTCFL/BORIS promoter and aberrant expression during endometrial cancer progression suggests a role as an Epi-driver gene. Oncotarget 5:4, pages 1052-1061.
Crossref
Horng-Shen Chen, Kayla A. Martin, Fang Lu, Lena N. Lupey, Joshua M. Mueller, Paul M. Lieberman & Italo Tempera. (2014) Epigenetic Deregulation of the LMP1/LMP2 Locus of Epstein-Barr Virus by Mutation of a Single CTCF-Cohesin Binding Site. Journal of Virology 88:3, pages 1703-1713.
Crossref
S. Tsui, W. Dai & L. Lu. (2014) CCCTC-binding factor mediates effects of glucose on beta cell survival. Cell Proliferation 47:1, pages 28-37.
Crossref
Amy D Marshall, Charles G Bailey & John EJ Rasko. (2014) CTCF and BORIS in genome regulation and cancer. Current Opinion in Genetics & Development 24, pages 8-15.
Crossref
Da-Jiang Li, Dinesh Verma, Tim Mosbruger & Sankar Swaminathan. (2014) CTCF and Rad21 Act as Host Cell Restriction Factors for Kaposi's Sarcoma-Associated Herpesvirus (KSHV) Lytic Replication by Modulating Viral Gene Transcription. PLoS Pathogens 10:1, pages e1003880.
Crossref
R. N. Plasschaert, S. Vigneau, I. Tempera, R. Gupta, J. Maksimoska, L. Everett, R. Davuluri, R. Mamorstein, P. M. Lieberman, D. Schultz, S. Hannenhalli & M. S. Bartolomei. (2013) CTCF binding site sequence differences are associated with unique regulatory and functional trends during embryonic stem cell differentiation. Nucleic Acids Research 42:2, pages 774-789.
Crossref
Babatunji W Ogunkolade, Tania A Jones, Johan Aarum, Jaroslaw Szary, Nicholas Owen, Diego Ottaviani, Muhammad A Mumin, Shyam Patel, Christopher A Pieri, Andrew R Silver & Denise Sheer. (2013) BORIS/CTCFL is an RNA-binding protein that associates with polysomes. BMC Cell Biology 14:1.
Crossref
Jessica L Stringham, Adam S Brown, Robert A Drewell & Jacqueline M Dresch. (2013) Flanking sequence context-dependent transcription factor binding in early Drosophila development. BMC Bioinformatics 14:1.
Crossref
Shahram Golbabapour, Mahmood Abdulla & Maryam Hajrezaei. 2013. Epigenetics and Pathology. Epigenetics and Pathology 23 64 .
Baoshan Xu, Kenneth K. Lee, Lily Zhang & Jennifer L. Gerton. (2013) Stimulation of mTORC1 with L-leucine Rescues Defects Associated with Roberts Syndrome. PLoS Genetics 9:10, pages e1003857.
Crossref
Adam R. Prickett, Nikolaos Barkas, Ruth B. McCole, Siobhan Hughes, Samuele M. Amante, Reiner Schulz & Rebecca J. Oakey. (2013) Genome-wide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differentially methylated regions. Genome Research 23:10, pages 1624-1635.
Crossref
Hilde Schjerven, Jami McLaughlin, Teresita L Arenzana, Seth Frietze, Donghui Cheng, Sarah E Wadsworth, Gregory W Lawson, Steven J Bensinger, Peggy J Farnham, Owen N Witte & Stephen T Smale. (2013) Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros. Nature Immunology 14:10, pages 1073-1083.
Crossref
Giovanni Ciriello, Martin L Miller, Bülent Arman Aksoy, Yasin Senbabaoglu, Nikolaus Schultz & Chris Sander. (2013) Emerging landscape of oncogenic signatures across human cancers. Nature Genetics 45:10, pages 1127-1133.
Crossref
Siqi Chen, Lijuan Su, Jun Qiu, Nannan Xiao, Jing Lin, Jia-heng Tan, Tian-miao Ou, Lian-quan Gu, Zhi-shu Huang & Ding Li. (2013) Mechanistic studies for the role of cellular nucleic-acid-binding protein (CNBP) in regulation of c-myc transcription. Biochimica et Biophysica Acta (BBA) - General Subjects 1830:10, pages 4769-4777.
Crossref
Veronique V. Belzil, Tania F. Gendron & Leonard Petrucelli. (2013) RNA-mediated toxicity in neurodegenerative disease. Molecular and Cellular Neuroscience 56, pages 406-419.
Crossref
Claudia Fabiola Méndez-Catalá, Svetlana Gretton, Alexander Vostrov, Elena Pugacheva, Dawn Farrar, Yoko Ito, France Docquier, Georgia-Xanthi Kita, Adele Murrell, Victor Lobanenkov & Elena Klenova. (2013) A Novel Mechanism for CTCF in the Epigenetic Regulation of Bax in Breast Cancer Cells. Neoplasia 15:8, pages 898-IN14.
Crossref
Zulema Romero, Fabrizia Urbinati, Sabine Geiger, Aaron R. Cooper, Jennifer Wherley, Michael L. Kaufman, Roger P. Hollis, Rafael Ruiz de Assin, Shantha Senadheera, Arineh Sahagian, Xiangyang Jin, Alyse Gellis, Xiaoyan Wang, David Gjertson, Satiro DeOliveira, Pamela Kempert, Sally Shupien, Hisham Abdel-Azim, Mark C. Walters, Herbert J. Meiselman, Rosalinda B. Wenby, Theresa Gruber, Victor Marder, Thomas D. Coates & Donald B. Kohn. (2013) β-globin gene transfer to human bone marrow for sickle cell disease. Journal of Clinical Investigation 123:8, pages 3317-3330.
Crossref
E. S. Kotova, I. V. Sorokina, S. B. Akopov, L. G. Nikolaev & E. D. Sverdlov. (2013) Expression of chicken CTCF gene in COS-1 cells and partial purification of CTCF protein. Biochemistry (Moscow) 78:8, pages 879-883.
Crossref
Dan Xu, Fu Yang, Ji-hang Yuan, Ling Zhang, Hai-shan Bi, Chuan-chuan Zhou, Feng Liu, Fang Wang & Shu-han Sun. (2013) Long noncoding RNAs associated with liver regeneration 1 accelerates hepatocyte proliferation during liver regeneration by activating Wnt/β-Catenin signaling. Hepatology 58:2, pages 739-751.
Crossref
Stella Lanni, Martina Goracci, Loredana Borrelli, Giorgia Mancano, Pietro Chiurazzi, Umberto Moscato, Fabrizio Ferrè, Manuela Helmer-Citterich, Elisabetta Tabolacci & Giovanni Neri. (2013) Role of CTCF Protein in Regulating FMR1 Locus Transcription. PLoS Genetics 9:7, pages e1003601.
Crossref
Sjoerd Johannes Bastiaan Holwerda & Wouter de Laat. (2013) CTCF: the protein, the binding partners, the binding sites and their chromatin loops. Philosophical Transactions of the Royal Society B: Biological Sciences 368:1620, pages 20120369.
Crossref
Shailendra Kumar Singh, Kazuhiko Maeda, Mohammed Mansour Abbas Eid, Sarah Ameen Almofty, Masaya Ono, Phuong Pham, Myron F. Goodman & Nobuo Sakaguchi. (2013) GANP regulates recruitment of AID to immunoglobulin variable regions by modulating transcription and nucleosome occupancy. Nature Communications 4:1.
Crossref
Hirotaka Nakahashi, Kyong-Rim Kieffer Kwon, Wolfgang Resch, Laura Vian, Marei Dose, Diana Stavreva, Ofir Hakim, Nathanael Pruett, Steevenson Nelson, Arito Yamane, Jason Qian, Wendy Dubois, Scott Welsh, Robert D. Phair, B. Franklin Pugh, Victor Lobanenkov, Gordon L. Hager & Rafael Casellas. (2013) A Genome-wide Map of CTCF Multivalency Redefines the CTCF Code. Cell Reports 3:5, pages 1678-1689.
Crossref
Igor Chernukhin. (2013) pepgrep: A Tool for Peptide MS/MS Pattern Matching. Genomics, Proteomics & Bioinformatics 11:2, pages 127-132.
Crossref
Nehal Gosalia, Shih-Hsing Leir & Ann Harris. (2013) Coordinate Regulation of the Gel-forming Mucin Genes at Chromosome 11p15.5*. Journal of Biological Chemistry 288:9, pages 6717-6725.
Crossref
Matthias Merkenschlager & Duncan T. Odom. (2013) CTCF and Cohesin: Linking Gene Regulatory Elements with Their Targets. Cell 152:6, pages 1285-1297.
Crossref
Jan Haas, Karen S. Frese, Yoon Jung Park, Andreas Keller, Britta Vogel, Anders M. Lindroth, Dieter Weichenhan, Jennifer Franke, Simon Fischer, Andrea Bauer, Sabine Marquart, Farbod Sedaghat‐Hamedani, Elham Kayvanpour, Doreen Köhler, Nadine M. Wolf, Sarah Hassel, Rouven Nietsch, Thomas Wieland, Philipp Ehlermann, Jobst‐Hendrik Schultz, Andreas Dösch, Derliz Mereles, Stefan Hardt, Johannes Backs, Jörg D. Hoheisel, Christoph Plass, Hugo A. Katus & Benjamin Meder. (2013) Alterations in cardiac DNA methylation in human dilated cardiomyopathy. EMBO Molecular Medicine 5:3, pages 413-429.
Crossref
Kefei ChenWenqing HuangBin HuangYongGang WeiBo LiYan GeYang Qin. (2013) BORIS, Brother of the Regulator of Imprinted Sites, Is Aberrantly Expressed in Hepatocellular Carcinoma . Genetic Testing and Molecular Biomarkers 17:2, pages 160-165.
Crossref
Manasi S. Apte & Victoria H. Meller. (2012) Homologue Pairing in Flies and Mammals: Gene Regulation When Two Are Involved. Genetics Research International 2012, pages 1-9.
Crossref
Tsutomu Aoki, Ali Sarkeshik, John Yates & Paul Schedl. (2012) Elba, a novel developmentally regulated chromatin boundary factor is a hetero-tripartite DNA binding complex. eLife 1.
Crossref
QIAN SUN, YAN-MEI YANG, SHI-HUI YU, YOU-XUE ZHANG, XIAO-GUANG HE, SHAN-SHAN SUN, XIAO-SHUAN LIANG & DA PANG. (2012) Covariation of copy number located at 16q22.1: New evidence in mammary ductal carcinoma. Oncology Reports 28:6, pages 2156-2162.
Crossref

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