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Molecular and Cellular Biology Volume 19, 1999 - Issue 11
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Transcriptional Regulation

In Vivo Analysis of Functional Regions within Yeast Rap1p

Ian R. GrahamInstitute of Genetics, University of Nottingham, Queen’s Medical Centre, NottinghamNG7 2UH, United Kingdom
,
Robin A. HawInstitute of Genetics, University of Nottingham, Queen’s Medical Centre, NottinghamNG7 2UH, United Kingdom
,
Karen G. SpinkInstitute of Genetics, University of Nottingham, Queen’s Medical Centre, NottinghamNG7 2UH, United Kingdom
,
Kathryn A. HaldenInstitute of Genetics, University of Nottingham, Queen’s Medical Centre, NottinghamNG7 2UH, United Kingdom
&
Alistair ChambersInstitute of Genetics, University of Nottingham, Queen’s Medical Centre, NottinghamNG7 2UH, United KingdomCorrespondence[email protected]
Pages 7481-7490 | Received 15 Mar 1999, Accepted 06 Aug 1999, Published online: 28 Mar 2023

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Krassimira A. Garbett, Manish K. Tripathi, Belgin Cencki, Justin H. Layer & P. Anthony Weil. (2007) Yeast TFIID Serves as a Coactivator for Rap1p by Direct Protein-Protein Interaction. Molecular and Cellular Biology 27:1, pages 297-311.
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Daniel L. Levy & Elizabeth H. Blackburn. (2004) Counting of Rif1p and Rif2p on Saccharomyces cerevisiae Telomeres Regulates Telomere Length. Molecular and Cellular Biology 24:24, pages 10857-10867.
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Arunadevi Yarragudi, Tsuyoshi Miyake, Rong Li & Randall H. Morse. (2004) Comparison of ABF1 and RAP1 in Chromatin Opening and Transactivator Potentiation in the Budding Yeast Saccharomyces cerevisiae. Molecular and Cellular Biology 24:20, pages 9152-9164.
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Tatiana L. Iouk, John D. Aitchison, Shawna Maguire & Richard W. Wozniak. (2001) Rrb1p, a Yeast Nuclear WD-Repeat Protein Involved in the Regulation of Ribosome Biosynthesis. Molecular and Cellular Biology 21:4, pages 1260-1271.
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Articles from other publishers (36)

Vikas Shalibhadra Trishla & Pulugurtha Bharadwaja Kirti. (2021) Structure-function relationship of Gossypium hirsutum NAC transcription factor, GhNAC4 with regard to ABA and abiotic stress responses. Plant Science 302, pages 110718.
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Marjia Afrin, Amit Kumar Gaurav, Xian YangXuehua Pan, Yanxiang Zhao & Bibo Li. (2020) Tb RAP1 has an unusual duplex DNA binding activity required for its telomere localization and VSG silencing . Science Advances 6:38.
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Anna Traczyk, Chong Wai Liew, David James Gill & Daniela Rhodes. (2020) Structural basis of G-quadruplex DNA recognition by the yeast telomeric protein Rap1. Nucleic Acids Research 48:8, pages 4562-4571.
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Philippe C. Després, Alexandre K. Dubé, Motoaki Seki, Nozomu Yachie & Christian R. Landry. (2020) Perturbing proteomes at single residue resolution using base editing. Nature Communications 11:1.
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Marjia Afrin, Hanadi Kishmiri, Ranjodh Sandhu, M. A. G. Rabbani & Bibo Li. (2020) Trypanosoma brucei RAP1 Has Essential Functional Domains That Are Required for Different Protein Interactions. mSphere 5:1.
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Amanda N. Johnson & P. Anthony Weil. (2017) Identification of a transcriptional activation domain in yeast repressor activator protein 1 (Rap1) using an altered DNA-binding specificity variant. Journal of Biological Chemistry 292:14, pages 5705-5723.
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Mónica Lamas-Maceiras, Esther Rodríguez-Belmonte, Manuel Becerra, Ma Isabel González-Siso & Ma Esperanza Cerdán. (2015) KlGcr1 controls glucose-6-phosphate dehydrogenase activity and responses to H2O2, cadmium and arsenate in Kluyveromyces lactis. Fungal Genetics and Biology 82, pages 95-103.
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Erik A. Feldmann, Katrina N. Koc & Roberto Galletto. (2015) Alternative arrangements of telomeric recognition sites regulate the binding mode of the DNA-binding domain of yeast Rap1. Biophysical Chemistry 198, pages 1-8.
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Gajendra Kumar Azad, Vikash Singh, Shivani Baranwal, Mayur Jankiram Thakare & Raghuvir S. Tomar. (2014) The transcription factor Rap1p is required for tolerance to cell‐wall perturbing agents and for cell‐wall maintenance in Saccharomyces cerevisiae . FEBS Letters 589:1, pages 59-67.
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Martin Kupiec. (2014) Biology of telomeres: lessons from budding yeast. FEMS Microbiology Reviews 38:2, pages 144-171.
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Raymund J Wellinger & Virginia A Zakian. (2012) Everything You Ever Wanted to Know About Saccharomyces cerevisiae Telomeres: Beginning to End . Genetics 191:4, pages 1073-1105.
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Fernando Gómez-Herreros, Lola de Miguel-Jiménez, Macarena Morillo-Huesca, Lidia Delgado-Ramos, María C. Muñoz-Centeno & Sebastián Chávez. (2012) TFIIS is required for the balanced expression of the genes encoding ribosomal components under transcriptional stress. Nucleic Acids Research 40:14, pages 6508-6519.
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José E. Pérez-Ortín, Daniel A. Medina & Antonio Jordán-Pla. (2011) Genomic Insights into the Different Layers of Gene Regulation in Yeast. Genetics Research International 2011, pages 1-12.
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Marie-Josèphe Giraud-Panis, Sabrina Pisano, Anaïs Poulet, Marie-Hélène Le Du & Eric Gilson. (2010) Structural identity of telomeric complexes. FEBS Letters 584:17, pages 3785-3799.
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Michael K. Jensen, Trine Kjaersgaard, Michael M. Nielsen, Pernille Galberg, Klaus Petersen, Charlotte O'Shea & Karen Skriver. (2010) The Arabidopsis thaliana NAC transcription factor family: structure–function relationships and determinants of ANAC019 stress signalling . Biochemical Journal 426:2, pages 183-196.
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Vicent Pelechano, Silvia Jimeno-González, Alfonso Rodríguez-Gil, José García-Martínez, José E. Pérez-Ortín & Sebastián Chávez. (2009) Regulon-Specific Control of Transcription Elongation across the Yeast Genome. PLoS Genetics 5:8, pages e1000614.
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Gordon Freckleton, Soyeon I. Lippman, James R. Broach & Saeed Tavazoie. (2009) Microarray Profiling of Phage-Display Selections for Rapid Mapping of Transcription Factor–DNA Interactions. PLoS Genetics 5:4, pages e1000449.
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Emily Ray Ko, Dennis Ko, Carolyn Chen & Joseph S Lipsick. (2008) A conserved acidic patch in the Myb domain is required for activation of an endogenous target gene and for chromatin binding. Molecular Cancer 7:1.
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Mourad Bendjennat & P. Anthony Weil. (2008) The Transcriptional Repressor Activator Protein Rap1p Is a Direct Regulator of TATA-binding Protein. Journal of Biological Chemistry 283:13, pages 8699-8710.
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Arpita Bhattacharya & Jonathan R. Warner. (2008) Tbf1 or Not Tbf1?. Molecular Cell 29:5, pages 537-538.
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Amos Tanay, Aviv Regev & Ron Shamir. (2005) Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast. Proceedings of the National Academy of Sciences 102:20, pages 7203-7208.
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Johan Wahlin, Monika Rosén & Marita Cohn. (2003) DNA Binding and Telomere Length Regulation of Yeast RAP1 Homologues. Journal of Molecular Biology 332:4, pages 821-833.
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Kajal Biswas, Klaus-Jörg Rieger & Joachim Morschhäuser. (2003) Functional analysis of CaRAP1 , encoding the Repressor/activator protein 1 of Candida albicans. Gene 307, pages 151-158.
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B. Piña, J. Fernández-Larrea, N. García-Reyero & F.-Z. Idrissi. (2003) The different (sur)faces of Rap1p. Molecular Genetics and Genomics 268:6, pages 791-798.
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Karin D. Breunig & H. Yde Steensma. 2003. Functional Genetics of Industrial Yeasts. Functional Genetics of Industrial Yeasts 171 205 .
Geneviève Fourel, Tsuyoshi Miyake, Pierre-Antoine Defossez, Rong Li & Éric Gilson. (2002) General Regulatory Factors (GRFs) as Genome Partitioners. Journal of Biological Chemistry 277:44, pages 41736-41743.
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Johan Wahlin & Marita Cohn. (2002) Analysis of theRAP1 protein binding to homogeneous telomeric repeats inSaccharomyces castellii. Yeast 19:3, pages 241-256.
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Robin Haw, Aruna Devi Yarragudi & Hiroshi Uemura. (2001) Isolation of aCandida glabrata homologue ofRAP1, a regulator of transcription and telomere function inSaccharomyces cerevisiae. Yeast 18:14, pages 1277-1284.
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Liuning Yu, Nevin Sabet, Alistair Chambers & Randall H. Morse. (2001) The N-terminal and C-terminal Domains of RAP1 Are Dispensable for Chromatin Opening and GCN4-mediated HIS4 Activation in Budding Yeast. Journal of Biological Chemistry 276:35, pages 33257-33264.
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Jason D. Lieb, Xiaole Liu, David Botstein & Patrick O. Brown. (2001) Promoter-specific binding of Rap1 revealed by genome-wide maps of protein–DNA association. Nature Genetics 28:4, pages 327-334.
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Yoshihiro Tsukihashi, Masashi Kawaichi & Tetsuro Kokubo. (2001) Requirement for Yeast TAF145 Function in Transcriptional Activation of the RPS5 Promoter That Depends on Both Core Promoter Structure and Upstream Activating Sequences. Journal of Biological Chemistry 276:28, pages 25715-25726.
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Fatima-Zahra Idrissi, Natalia Garcia-Reyero, Juan B. Fernandez-Larrea & Benjamin Piña. (2001) Alternative Mechanisms of Transcriptional Activation by Rap1p. Journal of Biological Chemistry 276:28, pages 26090-26098.
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Robin Haw, Aruna Devi Yarragudi & Hiroshi Uemura. (2001) Isolation ofGCR1, a major transcription factor of glycolytic genes inSaccharomyces cerevisiae, fromKluyveromyces lactis. Yeast 18:8, pages 729-735.
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Tsuyoshi Miyake, Yan-Fen Hu, David S. Yu & Rong Li. (2000) A Functional Comparison of BRCA1 C-terminal Domains in Transcription Activation and Chromatin Remodeling. Journal of Biological Chemistry 275:51, pages 40169-40173.
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Helena O.B Taylor, Marc O’Reilly, Andrew G.W Leslie & Daniela Rhodes. (2000) How the multifunctional yeast Rap1p discriminates between DNA target sites: a crystallographic analysis 1 1Edited by T. R. Richmond. Journal of Molecular Biology 303:5, pages 693-707.
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Randall H. Morse. (2000) RAP, RAP, open up! New wrinkles for RAP1 in yeast. Trends in Genetics 16:2, pages 51-53.
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