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Gene Expression

Trypanosoma brucei Guide RNA Poly(U) Tail Formation Is Stabilized by Cognate mRNA

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Pages 883-891 | Received 10 Aug 1999, Accepted 05 Nov 1999, Published online: 28 Mar 2023

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Igor Y. Morozov, Meriel G. Jones, Peter D. Gould, Victoria Crome, James B. Wilson, Anthony J. W. Hall, Daniel J. Rigden & Mark X. Caddick. (2012) mRNA 3′ Tagging Is Induced by Nonsense-Mediated Decay and Promotes Ribosome Dissociation. Molecular and Cellular Biology 32:13, pages 2585-2595.
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Julie A. Law, Catherine E. Huang, Sean F. O'Hearn & Barbara Sollner-Webb. (2005) In Trypanosoma brucei RNA Editing, Band II Enables Recognition Specifically at Each Step of the U Insertion Cycle. Molecular and Cellular Biology 25:7, pages 2785-2794.
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Sean F. O'Hearn, Catherine E. Huang, Mike Hemann, Alevtina Zhelonkina & Barbara Sollner-Webb. (2003) Trypanosoma brucei RNA Editing Complex. Molecular and Cellular Biology 23:21, pages 7909-7919.
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Robert P. Igo$suffix/text()$suffix/text(), Sobomabo D. Lawson & Kenneth Stuart. (2002) RNA Sequence and Base Pairing Effects on Insertion Editing in Trypanosoma brucei. Molecular and Cellular Biology 22:5, pages 1567-1576.
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Jorge Cruz-Reyes, Alevtina Zhelonkina, Laura Rusche & Barbara Sollner-Webb. (2001) Trypanosome RNA Editing: Simple Guide RNA Features Enhance U Deletion 100-Fold. Molecular and Cellular Biology 21:3, pages 884-892.
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Robert P. Igo$suffix/text()$suffix/text(), Setareh S. Palazzo, Moffett L. K. Burgess, Aswini K. Panigrahi & Kenneth Stuart. (2000) Uridylate Addition and RNA Ligation Contribute to the Specificity of Kinetoplastid Insertion RNA Editing. Molecular and Cellular Biology 20:22, pages 8447-8457.
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Najmeh Nikpour & Reza Salavati. (2019) The RNA binding activity of the first identified trypanosome protein with Z-DNA-binding domains. Scientific Reports 9:1.
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Zhenqiu Huang, Drahomíra Faktorová, Adéla Křížová, Lucie Kafková, Laurie K. Read, Julius Lukeš & Hassan Hashimi. (2015) Integrity of the core mitochondrial RNA-binding complex 1 is vital for trypanosome RNA editing. RNA 21:12, pages 2088-2102.
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Zdeněk Verner, Somsuvro Basu, Corinna Benz, Sameer Dixit, Eva Dobáková, Drahomíra Faktorová, Hassan Hashimi, Eva Horáková, Zhenqiu Huang, Zdeněk Paris, Priscila Peña-Diaz, Lucie Ridlon, Jiří Týč, David Wildridge, Alena Zíková & Julius Lukeš. 2015. 73 151 .
Blaine H. M. Mooers. 2015. RNA-RNA Interactions. RNA-RNA Interactions 191 216 .
Alexander Maxwell Burroughs, Yoshinari Ando & L Aravind. (2014) New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing. Wiley Interdisciplinary Reviews: RNA 5:2, pages 141-181.
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Hassan Hashimi, Sara L. Zimmer, Michelle L. Ammerman, Laurie K. Read & Julius Lukeš. (2013) Dual core processing: MRB1 is an emerging kinetoplast RNA editing complex. Trends in Parasitology 29:2, pages 91-99.
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Reza Salavati, Houtan Moshiri, Smriti Kala & Hamed Shateri Najafabadi. (2012) Inhibitors of RNA editing as potential chemotherapeutics against trypanosomatid pathogens. International Journal for Parasitology: Drugs and Drug Resistance 2, pages 36-46.
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Blaine H.M. Mooers & Amritanshu Singh. (2011) The crystal structure of an oligo(U):pre-mRNA duplex from a trypanosome RNA editing substrate. RNA 17:10, pages 1870-1883.
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Julius Lukeš, Hassan Hashimi, Zdeněk Verner & Zdeňka Čičová. 2010. Structures and Organelles in Pathogenic Protists. Structures and Organelles in Pathogenic Protists 227 252 .
Monika M Golas, Cordula Böhm, Bjoern Sander, Kerstin Effenberger, Michael Brecht, Holger Stark & H Ulrich Göringer. (2009) Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo. The EMBO Journal 28:6, pages 766-778.
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Julie A. Law, Sean F. O'Hearn & Barbara Sollner-Webb. (2008) Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion . RNA 14:6, pages 1187-1200.
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Georges Martin, Sylvie Doublié & Walter Keller. (2008) Determinants of substrate specificity in RNA-dependent nucleotidyl transferases. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1779:4, pages 206-216.
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Hema Bashyam. (2008) Michael T. McManus: Interrupting biology. Journal of Experimental Medicine 205:3, pages 506-507.
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Georges Martin & Walter Keller. (2007) RNA-specific ribonucleotidyl transferases. RNA 13:11, pages 1834-1849.
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I Saira Mian, Elizabeth A Worthey & Reza Salavati. (2006) Taking U out, with two nucleases?. BMC Bioinformatics 7:1.
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ALEVTINA G. ZHELONKINA, SEAN F. O’HEARN, JULIE A. LAW, JORGE CRUZ-REYES, CATHERINE E. HUANG, VADIM S. ALATORTSEV & BARBARA SOLLNER-WEBB. (2006) T. brucei RNA editing: Action of the U-insertional TUTase within a U-deletion cycle . RNA 12:3, pages 476-487.
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Julius Lukeš, Hassan Hashimi & Alena Zíková. (2005) Unexplained complexity of the mitochondrial genome and transcriptome in kinetoplastid flagellates. Current Genetics 48:5, pages 277-299.
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Kenneth D. Stuart, Achim Schnaufer, Nancy Lewis Ernst & Aswini K. Panigrahi. (2005) Complex management: RNA editing in trypanosomes. Trends in Biochemical Sciences 30:2, pages 97-105.
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Nancy Lewis Ernst, Brian Panicucci, Robert P IgoJr.Jr., Aswini K Panigrahi, Reza Salavati & Kenneth Stuart. (2003) TbMP57 Is a 3′ Terminal Uridylyl Transferase (TUTase) of the Trypanosoma brucei Editosome. Molecular Cell 11:6, pages 1525-1536.
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Tamara L Horton & Laura F Landweber. (2002) Rewriting the information in DNA: RNA editing in kinetoplastids and myxomycetes. Current Opinion in Microbiology 5:6, pages 620-626.
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Ruslan Aphasizhev, Sandro Sbicego, Marian Peris, Sei-Heon Jang, Inna Aphasizheva, Agda M. Simpson, Anatoly Rivlin & Larry Simpson. (2002) Trypanosome Mitochondrial 3′ Terminal Uridylyl Transferase (TUTase). Cell 108:5, pages 637-648.
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Robert P. IgoJr.Jr., David S. Weston, Nancy Lewis Ernst, Aswini K. Panigrahi, Reza Salavati & Kenneth Stuart. (2002) Role of Uridylate-Specific Exoribonuclease Activity in Trypanosoma brucei RNA Editing . Eukaryotic Cell 1:1, pages 112-118.
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John Richard Seed & Samuel J. Black. (2001) The Classic Paper of Tobie, Von brand, and Mehlman (1950) REVISITED. Journal of Parasitology 87:4, pages 718-720.
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Susan Madison-Antenucci & Stephen L Hajduk. (2001) RNA Editing–Associated Protein 1 Is an RNA Binding Protein with Specificity for Preedited mRNA. Molecular Cell 7:4, pages 879-886.
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K.T Militello, M.L Hayman & L.K Read. (2000) Transcriptional and post-transcriptional in organello labelling of Trypanosoma brucei mitochondrial RNA. International Journal for Parasitology 30:5, pages 643-647.
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