Advanced search
Publication Cover
Molecular and Cellular Biology Volume 23, 2003 - Issue 7
Submit an article Journal homepage
9
Views
54
CrossRef citations to date
0
Altmetric
DNA Dynamics and Chromosome Structure

Synthesis of Signals for De Novo DNA Methylation in Neurospora crassa

Hisashi TamaruDepartment of Biology and Institute of Molecular Biology, University of Oregon, Eugene, Oregon97403-1229
&
Eric U. SelkerDepartment of Biology and Institute of Molecular Biology, University of Oregon, Eugene, Oregon97403-1229Correspondence[email protected]
Pages 2379-2394 | Received 30 Sep 2002, Accepted 02 Jan 2003, Published online: 27 Mar 2023

Citations (54)

Keep up to date with the latest research on this topic with citation updates for this article.

Subscribe to citation updates

Read on this site (3)

Sara Hosseini, Cécile Meunier, Diem Nguyen, Johan Reimegård & Hanna Johannesson. (2020) Comparative analysis of genome-wide DNA methylation in Neurospora. Epigenetics 15:9, pages 972-987.
Read now
Kristina M. Smith, Pallavi A. Phatale, Christopher M. Sullivan, Kyle R. Pomraning & Michael Freitag. (2011) Heterochromatin Is Required for Normal Distribution of Neurospora crassa CenH3. Molecular and Cellular Biology 31:12, pages 2528-2542.
Read now
Shinji Honda & Eric U. Selker. (2008) Direct Interaction between DNA Methyltransferase DIM-2 and HP1 Is Required for DNA Methylation in Neurospora crassa. Molecular and Cellular Biology 28:19, pages 6044-6055.
Read now

Articles from other publishers (51)

Francesco Tini, Giovanni Beccari, Gianpiero Marconi, Andrea Porceddu, Micheal Sulyok, Donald M. Gardiner, Emidio Albertini & Lorenzo Covarelli. (2021) Identification of Putative Virulence Genes by DNA Methylation Studies in the Cereal Pathogen Fusarium graminearum. Cells 10:5, pages 1192.
Crossref
Andrew D Klocko, Calvin A Summers, Marissa L Glover, Robert Parrish, William K Storck, Kevin J McNaught, Nicole D Moss, Kirsten Gotting, Aurelian Stewart, Ariel M Morrison, Laurel Payne, Shin Hatakeyama & Eric U Selker. (2020) Selection and Characterization of Mutants Defective in DNA Methylation in Neurospora crassa . Genetics 216:3, pages 671-688.
Crossref
Linhao Xu & Hua Jiang. (2020) Writing and Reading Histone H3 Lysine 9 Methylation in Arabidopsis. Frontiers in Plant Science 11.
Crossref
Kandasamy Saravanakumar, Sabarathinam Shanmugam, Anjana Hari, Zeba Usmani, Davoodbasha Mubarak Ali, Kandasamy Kathiresan, Yevgen Karpichev, Bhim Pratap Singh, Susana Rodriguez-Couto, Myeong-Hyeon Wang & Vijai Kumar Gupta. 2020. Trichoderma: Agricultural Applications and Beyond. Trichoderma: Agricultural Applications and Beyond 325 350 .
Abigail J. Courtney, Aileen R. Ferraro, Andrew D. Klocko & Zachary A. Lewis. 2020. Genetics and Biotechnology. Genetics and Biotechnology 3 24 .
Robert J. Schmitz, Zachary A. Lewis & Mary G. Goll. (2019) DNA Methylation: Shared and Divergent Features across Eukaryotes. Trends in Genetics 35:11, pages 818-827.
Crossref
Stefania Bertazzoni, Angela H. Williams, Darcy A. Jones, Robert A. Syme, Kar-Chun Tan & James K. Hane. (2018) Accessories Make the Outfit: Accessory Chromosomes and Other Dispensable DNA Regions in Plant-Pathogenic Fungi. Molecular Plant-Microbe Interactions® 31:8, pages 779-788.
Crossref
Marjori Matzke, Tatsuo Kanno, Bruno Huettel, Estelle Jaligot, M. Florian Mette, David P. Kreil, Lucia Daxinger, Philipp Rovina, Werner Aufsatz & Antonius J. M. Matzke. 2018. Annual Plant Reviews online. Annual Plant Reviews online 69 105 .
Mareike Möller & Eva H. Stukenbrock. (2017) Evolution and genome architecture in fungal plant pathogens. Nature Reviews Microbiology 15:12, pages 756-771.
Crossref
Jordan D. Gessaman & Eric U. Selker. (2017) Induction of H3K9me3 and DNA methylation by tethered heterochromatin factors in Neurospora crassa . Proceedings of the National Academy of Sciences 114:45.
Crossref
A. John Clutterbuck. (2017) Genomic CG dinucleotide deficiencies associated with transposable element hypermutation in Basidiomycetes, some lower fungi, a moss and a clubmoss. Fungal Genetics and Biology 104, pages 16-28.
Crossref
Shinji Honda, Vincent T. BicoccaJordan D. GessamanMichael R. RountreeAyumi Yokoyama, Eun Y. YuJeanne M. L. SelkerEric U. Selker. (2016) Dual chromatin recognition by the histone deacetylase complex HCHC is required for proper DNA methylation in Neurospora crassa . Proceedings of the National Academy of Sciences 113:41.
Crossref
Yu-long Wang, Zhang-xun Wang, Chun Liu, Si-bao Wang & Bo Huang. (2015) Genome-wide analysis of DNA methylation in the sexual stage of the insect pathogenic fungus Cordyceps militaris. Fungal Biology 119:12, pages 1246-1254.
Crossref
Razieh Karimi Aghcheh & Christian P. Kubicek. (2015) Epigenetics as an emerging tool for improvement of fungal strains used in biotechnology. Applied Microbiology and Biotechnology 99:15, pages 6167-6181.
Crossref
Stephen B. Baylin. 2015. The Molecular Basis of Cancer. The Molecular Basis of Cancer 67 78.e3 .
James K. Hane, Angela H. Williams, Adam P. Taranto, Peter S. Solomon & Richard P. Oliver. 2015. Genetic Transformation Systems in Fungi, Volume 2. Genetic Transformation Systems in Fungi, Volume 2 55 68 .
Ming-Yueh Wu & Jae-Hyuk Yu. 2015. Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites, Volume 2. Biosynthesis and Molecular Genetics of Fungal Secondary Metabolites, Volume 2 29 42 .
Barbara Montanini, Pao-Yang Chen, Marco Morselli, Artur Jaroszewicz, David Lopez, Francis Martin, Simone Ottonello & Matteo Pellegrini. (2014) Non-exhaustive DNA methylation-mediated transposon silencing in the black truffle genome, a complex fungal genome with massive repeat element content. Genome Biology 15:8.
Crossref
Carlos Guerrero-Bosagna, Shelby Weeks & Michael K. Skinner. (2014) Identification of Genomic Features in Environmentally Induced Epigenetic Transgenerational Inherited Sperm Epimutations. PLoS ONE 9:6, pages e100194.
Crossref
Michael Freitag. 2014. Fungal Genomics. Fungal Genomics 99 120 .
Matthew Gentry & Peter Meyer. (2013) An 11bp Region with Stem Formation Potential Is Essential for de novo DNA Methylation of the RPS Element. PLoS ONE 8:5, pages e63652.
Crossref
Andrea Schäfer, Emil Karaulanov, Ulrike Stapf, Gabi Döderlein & Christof Niehrs. (2013) Ing1 functions in DNA demethylation by directing Gadd45a to H3K4me3. Genes & Development 27:3, pages 261-273.
Crossref
Kristina M. Smith, Pallavi A. Phatale, Erin L. Bredeweg, Lanelle R. Connolly, Kyle R. Pomraning & Michael Freitag. 2006. Encyclopedia of Molecular Cell Biology and Molecular Medicine. Encyclopedia of Molecular Cell Biology and Molecular Medicine.
Fabienne Malagnac & Philippe Silar. 2011. Handbook of Epigenetics. Handbook of Epigenetics 185 201 .
Zachary A. Lewis, Keyur K. Adhvaryu, Shinji Honda, Anthony L. Shiver, Marijn Knip, Ragna Sack & Eric U. Selker. (2010) DNA Methylation and Normal Chromosome Behavior in Neurospora Depend on Five Components of a Histone Methyltransferase Complex, DCDC. PLoS Genetics 6:11, pages e1001196.
Crossref
Hisashi Tamaru. (2010) Confining euchromatin/heterochromatin territory: jumonji crosses the line . Genes & Development 24:14, pages 1465-1478.
Crossref
M R Rountree & E U Selker. (2010) DNA methylation and the formation of heterochromatin in Neurospora crassa. Heredity 105:1, pages 38-44.
Crossref
Zachary A. Lewis, Keyur K. Adhvaryu, Shinji Honda, Anthony L. Shiver & Eric U. Selker. (2010) Identification of DIM-7, a protein required to target the DIM-5 H3 methyltransferase to chromatin. Proceedings of the National Academy of Sciences 107:18, pages 8310-8315.
Crossref
Shinji Honda, Zachary A. Lewis, Maite Huarte, Lucy Y. Cho, Larry L. David, Yang Shi & Eric U. Selker. (2010) The DMM complex prevents spreading of DNA methylation from transposons to nearby genes in Neurospora crassa . Genes & Development 24:5, pages 443-454.
Crossref
Zachary A. Lewis & Eric U. Selker. 2010. Cellular and Molecular Biology of Filamentous Fungi. Cellular and Molecular Biology of Filamentous Fungi 113 123 .
Yuanbiao Zhao, Ye Shen, Silu Yang, Jiyong Wang, Qiwen Hu, Ying Wang & Qun He. (2010) Ubiquitin Ligase Components Cullin4 and DDB1 Are Essential for DNA Methylation in Neurospora crassa. Journal of Biological Chemistry 285:7, pages 4355-4365.
Crossref
Zachary A. Lewis, Shinji Honda, Tamir K. Khlafallah, Jennifer K. Jeffress, Michael Freitag, Fabio Mohn, Dirk Schübeler & Eric U. Selker. (2009) Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa . Genome Research 19:3, pages 427-437.
Crossref
S H Lee, J Kim, W-H Kim & Y M Lee. (2008) Hypoxic silencing of tumor suppressor RUNX3 by histone modification in gastric cancer cells. Oncogene 28:2, pages 184-194.
Crossref
M.R. Rountree & E.U. Selker. 2009. Epigenomics. Epigenomics 321 341 .
Kristina M Smith, Gregory O Kothe, Cindy B Matsen, Tamir K Khlafallah, Keyur K Adhvaryu, Melissa Hemphill, Michael Freitag, Mohammad R Motamedi & Eric U Selker. (2008) The fungus Neurospora crassa displays telomeric silencing mediated by multiple sirtuins and by methylation of histone H3 lysine 9. Epigenetics & Chromatin 1:1.
Crossref
Stephen B. Baylin. 2008. The Molecular Basis of Cancer. The Molecular Basis of Cancer 57 65 .
Damien J. Fleetwood, Barry Scott, Geoffrey A. Lane, Aiko Tanaka & Richard D. Johnson. (2007) A Complex Ergovaline Gene Cluster in Epichloë Endophytes of Grasses. Applied and Environmental Microbiology 73:8, pages 2571-2579.
Crossref
Peter A. Jones & Stephen B. Baylin. (2007) The Epigenomics of Cancer. Cell 128:4, pages 683-692.
Crossref
Malcolm V. Brock, James G. Herman & Stephen B. Baylin. (2007) Cancer as a Manifestation of Aberrant Chromatin Structure. The Cancer Journal 13:1, pages 3-8.
Crossref
Stephen B. Baylin & Joyce E. Ohm. (2006) Epigenetic gene silencing in cancer – a mechanism for early oncogenic pathway addiction?. Nature Reviews Cancer 6:2, pages 107-116.
Crossref
Mary Grace GollTimothy H. Bestor. (2005) EUKARYOTIC CYTOSINE METHYLTRANSFERASES. Annual Review of Biochemistry 74:1, pages 481-514.
Crossref
Michael Freitag & Eric U Selker. (2005) Controlling DNA methylation: many roads to one modification. Current Opinion in Genetics & Development 15:2, pages 191-199.
Crossref
S.B. BAYLIN & W.Y. CHEN. (2005) Aberrant Gene Silencing in Tumor Progression: Implications for Control of Cancer. Cold Spring Harbor Symposia on Quantitative Biology 70:0, pages 427-433.
Crossref
Marjori A. Matzke & James A. Birchler. (2005) RNAi-mediated pathways in the nucleus. Nature Reviews Genetics 6:1, pages 24-35.
Crossref
Robert J Pratt, Dong W Lee & Rodolfo Aramayo. (2004) DNA Methylation Affects Meiotic trans-sensing, Not Meiotic Silencing, in Neurospora. Genetics 168:4, pages 1925-1935.
Crossref
Mathias Choquer, Martine Boccara, Isabelle R. Gonçalves, Marie-Christine Soulié & Anne Vidal-Cros. (2004) Survey of the Botrytis cinerea chitin synthase multigenic family through the analysis of six euascomycetes genomes. European Journal of Biochemistry 271:11, pages 2153-2164.
Crossref
Katherine A. Borkovich, Lisa A. Alex, Oded Yarden, Michael Freitag, Gloria E. Turner, Nick D. Read, Stephan Seiler, Deborah Bell-Pedersen, John Paietta, Nora Plesofsky, Michael Plamann, Marta Goodrich-Tanrikulu, Ulrich Schulte, Gertrud Mannhaupt, Frank E. Nargang, Alan Radford, Claude Selitrennikoff, James E. Galagan, Jay C. Dunlap, Jennifer J. Loros, David Catcheside, Hirokazu Inoue, Rodolfo Aramayo, Michael Polymenis, Eric U. Selker, Matthew S. Sachs, George A. Marzluf, Ian Paulsen, Rowland Davis, Daniel J. Ebbole, Alex Zelter, Eric R. Kalkman, Rebecca O'Rourke, Frederick Bowring, Jane Yeadon, Chizu Ishii, Keiichiro Suzuki, Wataru Sakai & Robert Pratt. (2004) Lessons from the Genome Sequence of Neurospora crassa : Tracing the Path from Genomic Blueprint to Multicellular Organism . Microbiology and Molecular Biology Reviews 68:1, pages 1-108.
Crossref
Michael Freitag, Patrick C. Hickey, Tamir K. Khlafallah, Nick D. Read & Eric U. Selker. (2004) HP1 Is Essential for DNA Methylation in Neurospora. Molecular Cell 13:3, pages 427-434.
Crossref
E.U. SELKER. (2004) Genome Defense and DNA Methylation in Neurospora. Cold Spring Harbor Symposia on Quantitative Biology 69:0, pages 119-124.
Crossref
E.U. SELKER. (2004) Genome Defense and DNA Methylation in Neurospora. Cold Spring Harbor Symposia on Quantitative Biology 69:1, pages 1-6.
Crossref
Chris R. Calladine, Horace R. Drew, Ben F. Luisi & Andrew A. Travers. 2004. Understanding DNA. Understanding DNA 270 294 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.