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Molecular and Cellular Biology Volume 24, 2004 - Issue 22
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DNA Dynamics and Chromosome Structure

Global Chromatin Structure of 45,000 Base Pairs of Chromosome III in a- and α-Cell Yeast and during Mating-Type Switching

Sevinc ErcanCenter for Gene Regulation and Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PennsylvaniaCorrespondence[email protected]
&
Robert T. SimpsonCenter for Gene Regulation and Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania
Pages 10026-10035 | Received 28 Jun 2004, Accepted 24 Aug 2004, Published online: 27 Mar 2023

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Kerstin Bystricky, Haico Van Attikum, Maria-Dolores Montiel, Vincent Dion, Lutz Gehlen & Susan M. Gasser. (2009) Regulation of Nuclear Positioning and Dynamics of the Silent Mating Type Loci by the Yeast Ku70/Ku80 Complex. Molecular and Cellular Biology 29:3, pages 835-848.
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Eric Coïc, Kaiming Sun, Cherry Wu & James E. Haber. (2006) Cell Cycle-Dependent Regulation of Saccharomyces cerevisiae Donor Preference during Mating-Type Switching by SBF (Swi4/Swi6) and Fkh1. Molecular and Cellular Biology 26:14, pages 5470-5480.
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Sevinc Ercan, Joseph C. Reese, Jerry L. Workman & Robert T. Simpson. (2005) Yeast Recombination Enhancer Is Stimulated by Transcription Activation. Molecular and Cellular Biology 25:18, pages 7976-7987.
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Hongting Tang, Yanling Wu, Jiliang Deng, Nanzhu Chen, Zhaohui Zheng, Yongjun Wei, Xiaozhou Luo & Jay D. Keasling. (2020) Promoter Architecture and Promoter Engineering in Saccharomyces cerevisiae. Metabolites 10:8, pages 320.
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Anuja Mehta, Annette Beach & James E. Haber. (2017) Homology Requirements and Competition between Gene Conversion and Break-Induced Replication during Double-Strand Break Repair. Molecular Cell 65:3, pages 515-526.e3.
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Barış AvşaroğluGabriel BronkKevin LiJames E. Haber & Jane Kondev. (2016) Chromosome-refolding model of mating-type switching in yeast. Proceedings of the National Academy of Sciences 113:45.
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Anne E Dodson & Jasper Rine. (2016) Donor Preference Meets Heterochromatin: Moonlighting Activities of a Recombinational Enhancer in Saccharomyces cerevisiae . Genetics 204:3, pages 1065-1074.
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Timothy R Hughes & Carl G de Boer. (2013) Mapping Yeast Transcriptional Networks. Genetics 195:1, pages 9-36.
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Wade M. Hicks, Miyuki Yamaguchi & James E. Haber. (2011) Real-time analysis of double-strand DNA break repair by homologous recombination. Proceedings of the National Academy of Sciences 108:8, pages 3108-3115.
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Xianfu Yi, Yu-Dong Cai, Zhisong He, WeiRen Cui & Xiangyin Kong. (2010) Prediction of Nucleosome Positioning Based on Transcription Factor Binding Sites. PLoS ONE 5:9, pages e12495.
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Anita Scipioni, Stefano Morosetti & Pasquale De Santis. (2009) A statistical thermodynamic approach for predicting the sequence-dependent nucleosome positioning along genomes. Biopolymers 91:12, pages 1143-1153.
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Sebla B. Kutluay & Steven J. Triezenberg. (2009) Role of chromatin during herpesvirus infections. Biochimica et Biophysica Acta (BBA) - General Subjects 1790:6, pages 456-466.
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Andrea A Duina, Anne Rufiange, John Bracey, Jeffrey Hall, Amine Nourani & Fred Winston. (2007) Evidence that the Localization of the Elongation Factor Spt16 Across Transcribed Genes Is Dependent Upon Histone H3 Integrity in Saccharomyces cerevisiae . Genetics 177:1, pages 101-112.
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Jason C. Tanny, Hediye Erdjument-Bromage, Paul Tempst & C. David Allis. (2007) Ubiquitylation of histone H2B controls RNA polymerase II transcription elongation independently of histone H3 methylation. Genes & Development 21:7, pages 835-847.
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Y. Kodama, S. Nagaya, A. Shinmyo & K. Kato. (2007) Mapping and Characterization of DNase I Hypersensitive Sites in Arabidopsis Chromatin. Plant and Cell Physiology 48:3, pages 459-470.
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Yuichi Kodama, Shingo Nagaya, Atsuhiko Shinmyo & Ko Kato. (2007) Distinct DNase I hypersensitive sites are absent from promoters of transcriptionally incompetent genes in Arabidopsis. Plant Biotechnology 24:4, pages 383-392.
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Gregory J Hogan, Cheol-Koo Lee & Jason D Lieb. (2006) Cell Cycle–Specified Fluctuation of Nucleosome Occupancy at Gene Promoters. PLoS Genetics 2:9, pages e158.
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Jerry L. Workman. (2006) Nucleosome displacement in transcription: Figure 1.. Genes & Development 20:15, pages 2009-2017.
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Paul G Giresi, Mayetri Gupta & Jason D Lieb. (2006) Regulation of nucleosome stability as a mediator of chromatin function. Current Opinion in Genetics & Development 16:2, pages 171-176.
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Guo-Cheng YuanYuen-Jong LiuMichael F. DionMichael D. SlackLani F. WuSteven J. AltschulerOliver J. Rando. (2005) Genome-Scale Identification of Nucleosome Positions in S. cerevisiae . Science 309:5734, pages 626-630.
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. (2005) Current awareness on yeast. Yeast 22:6, pages 503-510.
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