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North American Journal of Fisheries Management Volume 27, 2007 - Issue 1
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Article

Genetic Analyses Provide Insight into the Early Ocean Stock Distribution and Survival of Juvenile Coho Salmon off the Coasts of Washington and Oregon

Donald M. Van Doornik National Oceanic and Atmospheric Administration–Fisheries, Northwest Fisheries Science Center, Manchester Research Laboratory, 7305 East Beach Drive, Port Orchard, Washington, 98366, USA
,
David J. Teel National Oceanic and Atmospheric Administration–Fisheries, Northwest Fisheries Science Center, Manchester Research Laboratory, 7305 East Beach Drive, Port Orchard, Washington, 98366, USA
,
David R. Kuligowski National Oceanic and Atmospheric Administration–Fisheries, Northwest Fisheries Science Center, Manchester Research Laboratory, 7305 East Beach Drive, Port Orchard, Washington, 98366, USA
,
Cheryl A. Morgan Cooperative Institute for Marine Resources Studies, Hatfield Marine Science Center, Oregon State University, 2030 South Marine Science Drive, Newport, Oregon, 97365, USA
&
Edmundo Casillas National Oceanic and Atmospheric Administration–Fisheries, Northwest Fisheries Science Center, 2725 Montlake Boulevard East, Seattle, Washington, 98112, USA
Pages 220-237 | Received 02 May 2006, Accepted 24 Jul 2006, Published online: 08 Jan 2011

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G. Curtis Roegner, Laurie A. Weitkamp & David J. Teel. (2016) Comparative Use of Shallow and Deepwater Habitats by Juvenile Pacific Salmon in the Columbia River Estuary Prior to Ocean Entry. Marine and Coastal Fisheries 8:1, pages 536-552.
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Terry D. Beacham, Richard J. Beamish, Chrys M. Neville, John R. Candy, Colin Wallace, Strahan Tucker & Marc Trudel. (2016) Stock-Specific Size and Migration of Juvenile Coho Salmon in British Columbia and Southeast Alaska Waters. Marine and Coastal Fisheries 8:1, pages 292-314.
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Laurie A. Weitkamp, David J. Teel, Martin Liermann, Susan A. Hinton, Donald M. Van Doornik & Paul J. Bentley. (2015) Stock-Specific Size and Timing at Ocean Entry of Columbia River Juvenile Chinook Salmon and Steelhead: Implications for Early Ocean Growth. Marine and Coastal Fisheries 7:1, pages 370-392.
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David J. Teel, Brian J. Burke, David R. Kuligowski, Cheryl A. Morgan & Donald M. Van Doornik. (2015) Genetic Identification of Chinook Salmon: Stock-Specific Distributions of Juveniles along the Washington and Oregon Coasts. Marine and Coastal Fisheries 7:1, pages 274-300.
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J. P. Fisher, L. A. Weitkamp, D. J. Teel, S. A. Hinton, J. A. Orsi, E. V. Farley$suffix/text()$suffix/text(), J. F. T. Morris, M. E. Thiess, R. M. Sweeting & M. Trudel. (2014) Early Ocean Dispersal Patterns of Columbia River Chinook and Coho Salmon. Transactions of the American Fisheries Society 143:1, pages 252-272.
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Jessica Rohde, AnnaN. Kagley, KurtL. Fresh, FredA. Goetz & ThomasP. Quinn. (2013) Partial Migration and Diel Movement Patterns in Puget Sound Coho Salmon. Transactions of the American Fisheries Society 142:6, pages 1615-1628.
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TerryD. Beacham, JohnR. Candy, Colin Wallace, Michael Wetklo, Langtuo Deng & Cathy MacConnachie. (2012) Microsatellite Mixed-Stock Identification of Coho Salmon in British Columbia. Marine and Coastal Fisheries 4:1, pages 85-100.
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S. Tucker, M. Trudel, D.W. Welch, J.R. Candy, J.F. T. Morris, M.E. Thiess, C. Wallace & T.D. Beacham. (2011) Life History and Seasonal Stock-Specific Ocean Migration of Juvenile Chinook Salmon. Transactions of the American Fisheries Society 140:4, pages 1101-1119.
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JoshuaW. Chamberlin, AnnaN. Kagley, KurtL. Fresh & ThomasP. Quinn. (2011) Movements of Yearling Chinook Salmon during the First Summer in Marine Waters of Hood Canal, Washington. Transactions of the American Fisheries Society 140:2, pages 429-439.
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WillG. Warnock, JasonK. Blackburn & JosephB. Rasmussen. (2011) Estimating Proportional Contributions of Migratory Bull Trout from Hierarchical Populations to Mixed-Stock Recreational Fisheries Using Genetic and Trapping Data. Transactions of the American Fisheries Society 140:2, pages 345-355.
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TerryD. Beacham, Michael Wetklo, Langtuo Deng & Cathy MacConnachie. (2011) Coho Salmon Population Structure in North America Determined from Microsatellites. Transactions of the American Fisheries Society 140:2, pages 253-270.
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LaurieA. Weitkamp. (2010) Marine Distributions of Chinook Salmon from the West Coast of North America Determined by Coded Wire Tag Recoveries. Transactions of the American Fisheries Society 139:1, pages 147-170.
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Rebekah L. Horn, Hayley M. Nuetzel, Becky Johnson, Cory Kamphaus, Jon Lovrak, Kraig Mott, Todd Newsome & Shawn R. Narum. (2023) Utility of parentage‐based tagging for monitoring Coho salmon ( Oncorhynchus kisutch ) in the interior Columbia River basin . Evolutionary Applications.
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Terry D. BeachamColin WallaceKim JonsenBrenda McIntoshJohn R. CandyEric B. RondeauJean-Sébastien MooreLouis BernatchezRuth E. Withler. (2020) Accurate estimation of conservation unit contribution to coho salmon mixed-stock fisheries in British Columbia, Canada, using direct DNA sequencing for single nucleotide polymorphisms. Canadian Journal of Fisheries and Aquatic Sciences 77:8, pages 1302-1315.
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Daniel A. Isermann, Matthew J. Belnap, Keith N. Turnquist, Brian L. Sloss, Justin A. VanDeHey, Scott P. Hansen & David C. Caroffino. (2020) Defining the Need for Genetic Stock Assignment when Describing Stock Demographics and Dynamics: an Example using Lake Whitefish in Lake Michigan. Transactions of the American Fisheries Society 149:4, pages 398-413.
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Justin Bohling. (2020) Evaluating the effect of reference genome divergence on the analysis of empirical RADseq datasets. Ecology and Evolution 10:14, pages 7585-7601.
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Terry D. Beacham & Colin G. Wallace. (2019) Salmon species identification via direct DNA sequencing of single amplicons. Conservation Genetics Resources 12:2, pages 285-291.
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Justin Bohling, Jennifer Von Bargen & Peter Bahls. (2019) Genomic Characterization of Coho Salmon Spawning Populations from the Hood Canal. Transactions of the American Fisheries Society 149:1, pages 3-13.
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Cheryl A. Morgan, Brian R. Beckman, Laurie A. Weitkamp & Kurt L. Fresh. (2019) Recent Ecosystem Disturbance in the Northern California Current. Fisheries 44:10, pages 465-474.
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Donald M. Van Doornik, Brian R. Beckman, Jamal H. Moss, Wesley W. Strasburger & David J. Teel. (2019) Stock specific relative abundance of Columbia River juvenile Chinook salmon off the Southeast Alaska coast. Deep Sea Research Part II: Topical Studies in Oceanography 165, pages 322-328.
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Matthew L. Keefer, Timothy J. Blubaugh, Tami S. Clabough, Michael A. Jepson, George P. Naughton & Christopher C. Caudill. (2018) Coho Salmon Colonization of Oregon's Upper Willamette River Basin. Transactions of the American Fisheries Society 147:6, pages 1153-1166.
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Jesse McCane, Chris Adam, Bill Fleming, Mark Bricker & Matthew R. Campbell. (2018) FishGen.net: An Online Genetic Repository for Salmon and Steelhead Genetic Baselines. Fisheries 43:7, pages 326-330.
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Christian T. Smith, Jason Baumsteiger, William R. Ardren, Yvonne Dettlaff, Denise K. Hawkins & Donald M. Van Doornik. (2015) Eliminating Variation in Age at Spawning Leads to Genetic Divergence Within a Single Salmon Population. Journal of Fish and Wildlife Management 6:1, pages 4-18.
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T A Sandell, D J Teel, J Fisher, B Beckman & K C Jacobson. (2015) Infections by Renibacterium salmoninarum and Nanophyetus salmincola Chapin are associated with reduced growth of juvenile Chinook salmon, Oncorhynchus tshawytscha (Walbaum), in the Northeast Pacific Ocean . Journal of Fish Diseases 38:4, pages 365-378.
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Donald M. Van Doornik & Barry A. Berejikian. (2014) Landscape factors affect the genetic population structure of Oncorhynchus mykiss populations in Hood Canal, Washington. Environmental Biology of Fishes 98:2, pages 637-653.
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James P. LoseeJessica A. MillerWilliam T. PetersonDavid J. TeelKym C. Jacobson. (2014) Influence of ocean ecosystem variation on trophic interactions and survival of juvenile coho and Chinook salmon. Canadian Journal of Fisheries and Aquatic Sciences 71:11, pages 1747-1757.
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J. P. LoseeJ. FisherD. J. TeelR. E. Baldwin, D. J. Marcogliese & K. C. Jacobson. (2014) Growth and condition of juvenile coho salmon Oncorhynchus kisutch relate positively to species richness of trophically transmitted parasites . Journal of Fish Biology 85:5, pages 1665-1681.
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Laurie A. Weitkamp, Graham Goulette, James Hawkes, Michael O’Malley & Christine Lipsky. (2014) Juvenile salmon in estuaries: comparisons between North American Atlantic and Pacific salmon populations. Reviews in Fish Biology and Fisheries 24:3, pages 713-736.
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Thomas C. Wainwright & Laurie A. Weitkamp. (2013) Effects of Climate Change on Oregon Coast Coho Salmon: Habitat and Life-Cycle Interactions. Northwest Science 87:3, pages 219-242.
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RK Simmons, TP Quinn, LW Seeb, DE Schindler & R Hilborn. (2013) Role of estuarine rearing for sockeye salmon in Alaska (USA). Marine Ecology Progress Series 481, pages 211-223.
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NATHAN R. CAMPBELL & SHAWN R. NARUM. (2011) Development of 54 novel single-nucleotide polymorphism (SNP) assays for sockeye and coho salmon and assessment of available SNPs to differentiate stocks within the Columbia River. Molecular Ecology Resources 11, pages 20-30.
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WILLIAM T. PETERSON, CHERYL A. MORGAN, JOSEPH P. FISHER & EDMUNDO CASILLAS. (2010) Ocean distribution and habitat associations of yearling coho ( Oncorhynchus kisutch ) and Chinook ( O. tshawytscha ) salmon in the northern California Current . Fisheries Oceanography 19:6, pages 508-525.
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Jessica A. Miller, M. Renee Bellinger, James T. Golden, Lorissa Fujishin & Michael A. Banks. (2010) Integration of natural and artificial markers in a mixed stock analysis of Chinook salmon (Oncorhynchus tshawytscha). Fisheries Research 102:1-2, pages 152-159.
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