114
Views
37
CrossRef citations to date
0
Altmetric
Review

Protein primary structure using orthogonal fragmentation techniques in Fourier transform mass spectrometry

Pages 251-261 | Published online: 09 Jan 2014

Keep up to date with the latest research on this topic with citation updates for this article.

Read on this site (2)

Abraham Lo & KevinA. Schug. (2009) A Birds‐Eye View of Modern Proteomics. Separation & Purification Reviews 38:2, pages 148-172.
Read now
Steve MM Sweet & Helen J Cooper. (2007) Electron capture dissociation in the analysis of protein phosphorylation. Expert Review of Proteomics 4:2, pages 149-159.
Read now

Articles from other publishers (35)

Suideng Qin & Zhixin Tian. 2022. Proteoform Identification. Proteoform Identification 131 144 .
Muhammad A. Zenaidee, Benqian Wei, Carter Lantz, Hoi Ting Wu, Tyler R. Lambeth, Jolene K. Diedrich, Rachel R. Ogorzalek Loo, Ryan R. Julian & Joseph A. Loo. (2021) Internal Fragments Generated from Different Top-Down Mass Spectrometry Fragmentation Methods Extend Protein Sequence Coverage. Journal of the American Society for Mass Spectrometry 32:7, pages 1752-1758.
Crossref
Carter Lantz, Muhammad A. Zenaidee, Benqian Wei, Zachary Hemminger, Rachel R. Ogorzalek Loo & Joseph A. Loo. (2021) ClipsMS: An Algorithm for Analyzing Internal Fragments Resulting from Top-Down Mass Spectrometry. Journal of Proteome Research 20:4, pages 1928-1935.
Crossref
Muhammad A. Zenaidee, Carter Lantz, Taylor Perkins, Wonhyuek Jung, Rachel R. Ogorzalek Loo & Joseph A. Loo. (2020) Internal Fragments Generated by Electron Ionization Dissociation Enhance Protein Top-Down Mass Spectrometry. Journal of the American Society for Mass Spectrometry 31:9, pages 1896-1902.
Crossref
Vincent, Binos, Rochfort & Spangenberg. (2019) Top-Down Proteomics of Medicinal Cannabis. Proteomes 7:4, pages 33.
Crossref
Valery G. Voinov, Samuel E. Bennett & Douglas F. Barofsky. (2015) Electron-Induced Dissociation of Peptides in a Triple Quadrupole Mass Spectrometer Retrofitted with an Electromagnetostatic Cell. Journal of the American Society for Mass Spectrometry 26:5, pages 752-761.
Crossref
Mirela Sarbu, Roxana M. Ghiulai & Alina D. Zamfir. (2014) Recent developments and applications of electron transfer dissociation mass spectrometry in proteomics. Amino Acids 46:7, pages 1625-1634.
Crossref
Fedor Kryuchkov, Thiago Verano-Braga, Thomas A. Hansen, Richard R. Sprenger & Frank Kjeldsen. (2013) Deconvolution of Mixture Spectra and Increased Throughput of Peptide Identification by Utilization of Intensified Complementary Ions Formed in Tandem Mass Spectrometry. Journal of Proteome Research 12:7, pages 3362-3371.
Crossref
Adam P. Lothrop, Matthew P. Torres & Stephen M. Fuchs. (2013) Deciphering post-translational modification codes. FEBS Letters 587:8, pages 1247-1257.
Crossref
Thomas A. Hansen, Fedor Kryuchkov & Frank Kjeldsen. (2012) Reduction in Database Search Space by Utilization of Amino Acid Composition Information from Electron Transfer Dissociation and Higher-Energy Collisional Dissociation Mass Spectra. Analytical Chemistry 84:15, pages 6638-6645.
Crossref
Vincenzo Cunsolo, Vera Muccilli, Rosaria Saletti & Salvatore Foti. (2012) Mass spectrometry in the proteome analysis of mature cereal kernels. Mass Spectrometry Reviews 31:4, pages 448-465.
Crossref
Anastasia Kalli, Gabriela Grigorean & Kristina Håkansson. (2011) Electron Induced Dissociation of Singly Deprotonated Peptides. Journal of the American Society for Mass Spectrometry 22:12, pages 2209-2221.
Crossref
Benjamin N. Moore, Tony Ly & Ryan R. Julian. (2011) Radical Conversion and Migration in Electron Capture Dissociation. Journal of the American Chemical Society 133:18, pages 6997-7006.
Crossref
Sheng Zhang, Yong Yang & Theodore W. Thannhauser. 2011. Gene Discovery for Disease Models. Gene Discovery for Disease Models 471 530 .
Jennifer S. Cobb, Michael L. Easterling & Jeffrey N. Agar. (2011) Structural characterization of intact proteins is enhanced by prevalent fragmentation pathways rarely observed for peptides. Journal of the American Society for Mass Spectrometry 21:6, pages 949-959.
Crossref
Zhongqi Zhang. (2010) Prediction of Electron-Transfer/Capture Dissociation Spectra of Peptides. Analytical Chemistry 82:5, pages 1990-2005.
Crossref
Anastasia Kalli & Kristina Håkansson. (2010) Electron capture dissociation of highly charged proteolytic peptides from Lys N, Lys C and Glu C digestion. Molecular BioSystems 6:9, pages 1668.
Crossref
Bulbul Chakravarti, Buddhadeb Mallik & Deb N. Chakravarti. 2010. Systems Biology in Drug Discovery and Development. Systems Biology in Drug Discovery and Development 3 28 .
Hongqian Yang, Eva Y. M. Fung, Alexander R. Zubarev & Roman A. Zubarev. (2009) Toward Proteome-Scale Identification and Quantification of Isoaspartyl Residues in Biological Samples. Journal of Proteome Research 8:10, pages 4615-4621.
Crossref
Valery G. Voinov, Joseph S. Beckman, Max L. Deinzer & Douglas F. Barofsky. (2009) Electron-capture dissociation (ECD), collision-induced dissociation (CID) and ECD/CID in a linear radio-frequency-free magnetic cell. Rapid Communications in Mass Spectrometry 23:18, pages 3028-3030.
Crossref
Hisham Ben Hamidane, Diego Chiappe, Ralf Hartmer, Aleksey Vorobyev, Marc Moniatte & Yury O. Tsybin. (2008) Electron capture and transfer dissociation: Peptide structure analysis at different ion internal energy levels. Journal of the American Society for Mass Spectrometry 20:4, pages 567-575.
Crossref
Xuemei Han, Aaron Aslanian & John R YatesIIIIII. (2008) Mass spectrometry for proteomics. Current Opinion in Chemical Biology 12:5, pages 483-490.
Crossref
Vincent Pouthier & Yury O. Tsybin. (2008) Amide-I relaxation-induced hydrogen bond distortion: An intermediate in electron capture dissociation mass spectrometry of α-helical peptides?. The Journal of Chemical Physics 129:9.
Crossref
Andrew J. Creese & Helen J. Cooper. (2011) The effect of phosphorylation on the electron capture dissociation of peptide ions. Journal of the American Society for Mass Spectrometry 19:9, pages 1263-1274.
Crossref
Anastasia Kalli & Kristina Håkansson. (2008) Comparison of the Electron Capture Dissociation Fragmentation Behavior of Doubly and Triply Protonated Peptides from Trypsin, Glu-C, and Chymotrypsin Digestion. Journal of Proteome Research 7:7, pages 2834-2844.
Crossref
Roman A. Zubarev, Alexander R. Zubarev & Mikhail M. Savitski. (2011) Electron capture/transfer versus collisionally activated/induced dissociations: Solo or duet?. Journal of the American Society for Mass Spectrometry 19:6, pages 753-761.
Crossref
Hye Kyong Kweon & Kristina Håkansson. (2008) Metal Oxide-Based Enrichment Combined with Gas-Phase Ion-Electron Reactions for Improved Mass Spectrometric Characterization of Protein Phosphorylation. Journal of Proteome Research 7:2, pages 749-755.
Crossref
Frank Kjeldsen, Anders M. B. Giessing, Christian R. Ingrell & Ole N. Jensen. (2007) Peptide Sequencing and Characterization of Post-Translational Modifications by Enhanced Ion-Charging and Liquid Chromatography Electron-Transfer Dissociation Tandem Mass Spectrometry. Analytical Chemistry 79:24, pages 9243-9252.
Crossref
Yury O. Tsybin, Huan He, Mark R. Emmett, Christopher L. Hendrickson & Alan G. Marshall. (2007) Ion Activation in Electron Capture Dissociation To Distinguish between N-Terminal and C-Terminal Product Ions. Analytical Chemistry 79:20, pages 7596-7602.
Crossref
Xiaoyun Liu, Stephen J. Valentine, Manolo D. Plasencia, Sarah Trimpin, Stephen Naylor & David E. Clemmer. (2007) Mapping the human plasma proteome by SCX-LC-IMS-MS. Journal of the American Society for Mass Spectrometry 18:7, pages 1249-1264.
Crossref
Hyuk Kang, Ljiljana Paš-Tolić & Richard D. Smith. (2007) Targeted tandem mass spectrometry for high-throughput comparative proteomics employing NanoLC-FTICR MS with external ion dissociation. Journal of the American Society for Mass Spectrometry 18:7, pages 1332-1343.
Crossref
Alexander Leitner, Alexandra Foettinger & Wolfgang Lindner. (2007) Improving fragmentation of poorly fragmenting peptides and phosphopeptides during collision-induced dissociation by malondialdehyde modification of arginine residues. Journal of Mass Spectrometry 42:7, pages 950-959.
Crossref
Michael L. Nielsen, Mikhail M. Savitski & Roman A. Zubarev. (2006) Extent of Modifications in Human Proteome Samples and Their Effect on Dynamic Range of Analysis in Shotgun Proteomics. Molecular & Cellular Proteomics 5:12, pages 2384-2391.
Crossref
Christoph Stingl, Christian Ihling, Gustav Ammerer, Andrea Sinz & Karl Mechtler. (2006) Application of different fragmentation techniques for the analysis of phosphopeptides using a hybrid linear ion trap-FTICR mass spectrometer. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1764:12, pages 1842-1852.
Crossref
Alexander Leitner & Wolfgang Lindner. (2006) Chemistry meets proteomics: The use of chemical tagging reactions for MS-based proteomics. PROTEOMICS 6:20, pages 5418-5434.
Crossref

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.