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Natália Yoko Sitanaka, Alice Eiko Murakami, Lucas Antônio Costa Esteves, Paula Carina de Oliveira, Eliane Gasparino, Angélica de Souza Khatlab & Paulo Cesar Pozza. (2022) Dietary guanidinoacetic acid increases the longissimus dorsi muscle depth of finishing pigs without requiring a higher standardised ileal digestible methionine + cysteine concentration. Italian Journal of Animal Science 21:1, pages 737-748.
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Megan M. Niedzwiecki, Megan N. Hall, Xinhua Liu, Julie Oka, Kristin N. Harper, Vesna Slavkovich, Vesna Ilievski, Diane Levy, Alexander van Geen, Jacob L. Mey, Shafiul Alam, Abu B. Siddique, Faruque Parvez, Joseph H. Graziano & Mary V. Gamble. (2013) Blood glutathione redox status and global methylation of peripheral blood mononuclear cell DNA in Bangladeshi adults. Epigenetics 8:7, pages 730-738.
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Michelle A. Charles, Ian T. Johnson & Nigel J. Belshaw. (2012) Supra-physiological folic acid concentrations induce aberrant DNA methylation in normal human cells in vitro. Epigenetics 7:7, pages 689-694.
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Anowarul Islam, Zeeshan Shaukat, Rashid Hussain & Stephen L. Gregory. (2022) One-Carbon and Polyamine Metabolism as Cancer Therapy Targets. Biomolecules 12:12, pages 1902.
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David Fernández-Ramos, Fernando Lopitz-Otsoa, Oscar Millet, Cristina Alonso, Shelly C. Lu & José M. Mato. (2022) One Carbon Metabolism and S-Adenosylmethionine in Non-Alcoholic Fatty Liver Disease Pathogenesis and Subtypes. Livers 2:4, pages 243-257.
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Ruby Kim, H. Frederik Nijhout & Michael C. Reed. (2021) One-carbon metabolism during the menstrual cycle and pregnancy. PLOS Computational Biology 17:12, pages e1009708.
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Heleen Van Puyvelde, Nikos Papadimitriou, Joanna Clasen, David Muller, Carine Biessy, Pietro Ferrari, Jytte Halkjær, Kim Overvad, Anne Tjønneland, Renée T. Fortner, Verena Katzke, Matthias B. Schulze, Paolo Chiodini, Giovanna Masala, Valeria Pala, Carlotta Sacerdote, Rosario Tumino, Marije F. Bakker, Antonio Agudo, Eva Ardanaz, María Dolores Chirlaque López, Maria-Jose Sánchez, Ulrika Ericson, Björn Gylling, Therese Karlsson, Jonas Manjer, Julie A. Schmidt, Geneviève Nicolas, Corinne Casagrande, Elisabete Weiderpass, Alicia K. Heath, Lode Godderis, Koen Van Herck, Dirk De Bacquer, Marc J. Gunter & Inge Huybrechts. (2021) Dietary Methyl-Group Donor Intake and Breast Cancer Risk in the European Prospective Investigation into Cancer and Nutrition (EPIC). Nutrients 13:6, pages 1843.
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Aleksandr V. Zaitsev, Michael V. Martinov, Victor M. Vitvitsky & Fazoil I. Ataullakhanov. (2019) Rat liver folate metabolism can provide an independent functioning of associated metabolic pathways. Scientific Reports 9:1.
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H. Frederik Nijhout, Janet A. Best & Michael C. Reed. (2018) Systems biology of robustness and homeostatic mechanisms. WIREs Systems Biology and Medicine 11:3.
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Farrah Sadre-Marandi, Thabat Dahdoul, Michael C. Reed & H. Frederik Nijhout. (2018) Sex differences in hepatic one-carbon metabolism. BMC Systems Biology 12:1.
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Ruben Esse, Tom Teerlink, Pieter Koolwijk, Isabel Tavares de Almeida, Henk Blom & Rita Castro. (2018) Folinic Acid Increases Protein Arginine Methylation in Human Endothelial Cells. Nutrients 10:4, pages 404.
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P. B. Cronje. (2018) Essential role of methyl donors in animal productivity. Animal Production Science 58:4, pages 655.
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Michael Reed, Janet Best, Martin Golubitsky, Ian Stewart & H. Frederik Nijhout. (2017) Analysis of Homeostatic Mechanisms in Biochemical Networks. Bulletin of Mathematical Biology 79:11, pages 2534-2557.
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H. Frederik Nijhout, Farrah Sadre-Marandi, Janet Best & Michael C. Reed. (2017) Systems Biology of Phenotypic Robustness and Plasticity. Integrative and Comparative Biology 57:2, pages 171-184.
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Cleiton Pagliari Sangali, Eliane Gasparino, Ricardo Souza Vasconcellos, Marcelise Regina Fachinello, Alessandra Nardina Trícia Rigo Monteiro, Lucas Antonio Costa Esteves, Lucas Pimentel Bonagurio & Paulo Cesar Pozza. (2017) Methionine + cystine levels and vitamin B6 supplementation on performance and enzyme expression of methionine metabolism of gilts from 75 to 100 kg. Revista Brasileira de Zootecnia 46:3, pages 223-230.
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Troy Vargason, Daniel P. Howsmon, Stepan Melnyk, S. Jill James & Juergen Hahn. (2017) Mathematical modeling of the methionine cycle and transsulfuration pathway in individuals with autism spectrum disorder. Journal of Theoretical Biology 416, pages 28-37.
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Eva F. G. Naninck, J. Efraim Oosterink, Kit‐Yi Yam, Lennart P. Vries, Henk Schierbeek, Johannes B. Goudoever, Rikst‐Nynke Verkaik‐Schakel, Josèe A. Plantinga, Torsten Plosch, Paul J. Lucassen & Aniko Korosi. (2016) Early micronutrient supplementation protects against early stress‐induced cognitive impairments. The FASEB Journal 31:2, pages 505-518.
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Mark T. Mc Auley, Kathleen M. Mooney & J. Enrique Salcedo-Sora. (2016) Computational modelling folate metabolism and DNA methylation: implications for understanding health and ageing. Briefings in Bioinformatics, pages bbw116.
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Rebecca A. Jackson, Mai Linh Nguyen, Angela N. Barrett, Yuan Yee Tan, Mahesh A. Choolani & Ee Sin Chen. (2016) Synthetic combinations of missense polymorphic genetic changes underlying Down syndrome susceptibility. Cellular and Molecular Life Sciences 73:21, pages 4001-4017.
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Pedro A. Saa & Lars K. Nielsen. (2016) Construction of feasible and accurate kinetic models of metabolism: A Bayesian approach. Scientific Reports 6:1.
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Y.P. Ding, E.K.R. Pedersen, S. Johansson, J.F. GregoryIIIIII, P.M. Ueland, G.F.T. Svingen, Ø. Helgeland, K. Meyer, Å. Fredriksen & O.K. Nygård. (2016) B vitamin treatments modify the risk of myocardial infarction associated with a MTHFD1 polymorphism in patients with stable angina pectoris. Nutrition, Metabolism and Cardiovascular Diseases 26:6, pages 495-501.
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Varun Karamshetty, Jhankar D. Acharya, Saroj Ghaskadbi & Pranay Goel. (2016) Mathematical Modeling of Glutathione Status in Type 2 Diabetics with Vitamin B12 Deficiency. Frontiers in Cell and Developmental Biology 4.
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Lianne Hoeijmakers, Hermannus Kempe & Pernette J. Verschure. (2016) Epigenetic imprinting during assisted reproductive technologies: The effect of temporal and cumulative fluctuations in methionine cycling on the DNA methylation state. Molecular Reproduction and Development 83:2, pages 94-107.
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Michael C. Reed, Mary V. Gamble, Megan N. Hall & H. Frederik Nijhout. (2015) Mathematical analysis of the regulation of competing methyltransferases. BMC Systems Biology 9:1.
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H. Frederik Nijhout, Janet A. Best & Michael C. Reed. (2015) Using mathematical models to understand metabolism, genes, and disease. BMC Biology 13:1.
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J. Efraim Oosterink, Eva F.G. Naninck, Aniko Korosi, Paul J. Lucassen, Johannes B. van Goudoever & Henk Schierbeek. (2015) Accurate measurement of the essential micronutrients methionine, homocysteine, vitamins B6, B12, B9 and their metabolites in plasma, brain and maternal milk of mice using LC/MS ion trap analysis. Journal of Chromatography B 998-999, pages 106-113.
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Lynn B Bailey, Patrick J Stover, Helene McNulty, Michael F Fenech, Jesse F GregoryIIIIII, James L Mills, Christine M Pfeiffer, Zia Fazili, Mindy Zhang, Per M Ueland, Anne M Molloy, Marie A Caudill, Barry Shane, Robert J Berry, Regan L Bailey, Dorothy B Hausman, Ramkripa Raghavan & Daniel J Raiten. (2015) Biomarkers of Nutrition for Development—Folate Review. The Journal of Nutrition 145:7, pages 1636S-1680S.
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H. Frederik Nijhout. 2015. Conceptual Change in Biology. Conceptual Change in Biology
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H. Frederik Nijhout, Janet Best & Michael C. Reed. (2014) Escape from homeostasis. Mathematical Biosciences 257, pages 104-110.
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Ekaterina Maslova & Susanne Hansen. (2014) Prenatal Dietary Determinants of Asthma and Related Allergic Disorders in Childhood. Current Nutrition Reports 3:3, pages 233-244.
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Vanessa R. da SilvaMaria A. RalatEoin P. QuinlivanBarbara N. DeRattTimothy J. GarrettYueh-Yun ChiH. Frederik Nijhout, Michael C. Reed & Jesse F. Gregory3rd3rd. (2014) Targeted metabolomics and mathematical modeling demonstrate that vitamin B-6 restriction alters one-carbon metabolism in cultured HepG2 cells. American Journal of Physiology-Endocrinology and Metabolism 307:1, pages E93-E101.
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H. F. Nijhout & M. C. Reed. (2014) Homeostasis and Dynamic Stability of the Phenotype Link Robustness and Plasticity. Integrative and Comparative Biology 54:2, pages 264-275.
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J. D. Potter. (2014) The failure of cancer chemoprevention. Carcinogenesis 35:5, pages 974-982.
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John C. Panetta, Steven W. Paugh & William E. Evans. (2013) Mathematical modeling of folate metabolism. WIREs Systems Biology and Medicine 5:5, pages 603-613.
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Jean-Louis Guéant, Fares Namour, Rosa-Maria Guéant-Rodriguez & Jean-Luc Daval. (2013) Folate and fetal programming: a play in epigenomics?. Trends in Endocrinology & Metabolism 24:6, pages 279-289.
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Sean D Lawley, Molly Cinderella, Megan N Hall, Mary V Gamble, H Frederik Nijhout & Michael C Reed. (2011) Mathematical model insights into arsenic detoxification. Theoretical Biology and Medical Modelling 8:1.
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Marian L. Neuhouser, H. Frederik Nijhout, Jesse F. GregoryIIIIII, Michael C. Reed, S. Jill James, Amy Liu, Barry Shane & Cornelia M. Ulrich. (2011) Mathematical Modeling Predicts the Effect of Folate Deficiency and Excess on Cancer-Related Biomarkers. Cancer Epidemiology, Biomarkers & Prevention 20:9, pages 1912-1917.
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Igor P. Pogribny, Adam R. Karpf, Smitha R. James, Stepan Melnyk, Tao Han & Volodymyr P. Tryndyak. (2008) Epigenetic alterations in the brains of Fisher 344 rats induced by long-term administration of folate/methyl-deficient diet. Brain Research 1237, pages 25-34.
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Cornelia M. Ulrich, Marian Neuhouser, Amy Y. Liu, Alanna Boynton, Jesse F. GregoryIIIIII, Barry Shane, S. Jill James, Michael C. Reed & H. Frederik Nijhout. (2008) Mathematical Modeling of Folate Metabolism: Predicted Effects of Genetic Polymorphisms on Mechanisms and Biomarkers Relevant to Carcinogenesis. Cancer Epidemiology, Biomarkers & Prevention 17:7, pages 1822-1831.
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Audrey Y. Jung, Elizabeth M. Poole, Jeanette Bigler, John Whitton, John D. Potter & Cornelia M. Ulrich. (2008) DNA Methyltransferase and Alcohol Dehydrogenase: Gene-Nutrient Interactions in Relation to Risk of Colorectal Polyps. Cancer Epidemiology, Biomarkers & Prevention 17:2, pages 330-338.
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H. Frederik Nijhout, Michael C. Reed & Cornelia M. Ulrich. (2015) A Day in the Life of Cell Metabolism. Biological Theory 2:2, pages 124-127.
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H Frederik Nijhout, Michael C Reed, Shi-Ling Lam, Barry Shane, Jesse F Gregory & Cornelia M Ulrich. (2006) In silico experimentation with a model of hepatic mitochondrial folate metabolism. Theoretical Biology and Medical Modelling 3:1.
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Anita Koushik, Peter Kraft, Charles S. Fuchs, Susan E. Hankinson, Walter C. Willett, Edward L. Giovannucci & David J. Hunter. (2006) Nonsynonymous Polymorphisms in Genes in the One-Carbon Metabolism Pathway and Associations with Colorectal Cancer. Cancer Epidemiology, Biomarkers & Prevention 15:12, pages 2408-2417.
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Michael C Reed, H. Frederik Nijhout, Marian L Neuhouser, Jesse F GregoryIIIIII, Barry Shane, S Jill James, Alanna Boynton & Cornelia M Ulrich. (2006) A Mathematical Model Gives Insights into Nutritional and Genetic Aspects of Folate-Mediated One-Carbon Metabolism. The Journal of Nutrition 136:10, pages 2653-2661.
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Cornelia M. Ulrich, H. Frederik Nijhout & Michael C. Reed. (2006) Mathematical Modeling: Epidemiology Meets Systems Biology. Cancer Epidemiology, Biomarkers & Prevention 15:5, pages 827-829.
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