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Research Paper

Prion formation by a yeast GLFG nucleoporin

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Pages 391-399 | Published online: 07 May 2012

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Read on this site (9)

Dustin K. Goncharoff, Raudel Cabral, Sarah V. Applebey, Manasa Pagadala, Zhiqiang Du & Liming Li. (2021) Defining Key Residues of the Swi1 Prion Domain in Prion Formation and Maintenance. Molecular and Cellular Biology 41:7.
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Stephanie Valtierra, Zhiqiang Du & Liming Li. (2017) Analysis of Small Critical Regions of Swi1 Conferring Prion Formation, Maintenance, and Transmission. Molecular and Cellular Biology 37:20.
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Jenifer E. Shattuck, Aubrey C. Waechter & Eric D. Ross. (2017) The effects of glutamine/asparagine content on aggregation and heterologous prion induction by yeast prion-like domains. Prion 11:4, pages 249-264.
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Cristina Batlle, Valentin Iglesias, Susanna Navarro & Salvador Ventura. (2017) Prion-like proteins and their computational identification in proteomes. Expert Review of Proteomics 14:4, pages 335-350.
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Christina Li, Alexander Goryaynov & Weidong Yang. (2016) The selective permeability barrier in the nuclear pore complex. Nucleus 7:5, pages 430-446.
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Anton A. Nizhnikov, Kirill S. Antonets, Stanislav A. Bondarev, Sergey G. Inge-Vechtomov & Irina L. Derkatch. (2016) Prions, amyloids, and RNA: Pieces of a puzzle. Prion 10:3, pages 182-206.
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William M. Holmes, Courtney L. Klaips & Tricia R. Serio. (2014) Defining the limits: Protein aggregation and toxicity in vivo. Critical Reviews in Biochemistry and Molecular Biology 49:4, pages 294-303.
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Genjiro Suzuki & Motomasa Tanaka. (2013) Expanding the yeast prion world. Prion 7:2, pages 109-113.
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. (2012) Landes Highlights. Nucleus 3:6, pages 475-477.
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Articles from other publishers (51)

Tomasz Zajkowski, Michael D. Lee, Siddhant Sharma, Alec Vallota‐Eastman, Mikołaj Kuska, Małgorzata Malczewska & Lynn J. Rothschild. (2023) Conserved functions of prion candidates suggest a primeval role of protein self‐templating. Proteins: Structure, Function, and Bioinformatics 91:9, pages 1298-1315.
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Galina A. Zhouravleva, Stanislav A. Bondarev & Nina P. Trubitsina. (2023) How Big Is the Yeast Prion Universe?. International Journal of Molecular Sciences 24:14, pages 11651.
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Lavrentii G. Danilov, Xenia V. Sukhanova, Tatiana M. Rogoza, Ekaterina Y. Antonova, Nina P. Trubitsina, Galina A. Zhouravleva & Stanislav A. Bondarev. (2023) Identification of New FG-Repeat Nucleoporins with Amyloid Properties. International Journal of Molecular Sciences 24:10, pages 8571.
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Eric D. Ross & Sean M. Cascarina. 2023. Structure and Intrinsic Disorder in Enzymology. Structure and Intrinsic Disorder in Enzymology 397 426 .
Philippe Silar. 2023. Handbook of Epigenetics. Handbook of Epigenetics 73 87 .
Zhiqiang Du, Brandon Cho & Liming Li. (2022) Identifying Endogenous Cellular Proteins Destabilizing the Propagation of Swi1 Prion upon Overproduction. Viruses 14:7, pages 1366.
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Vitaly V. Kushnirov, Alexander A. Dergalev, Maya K. Alieva & Alexander I. Alexandrov. (2022) Structural Bases of Prion Variation in Yeast. International Journal of Molecular Sciences 23:10, pages 5738.
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Vitaly V. Kushnirov, Alexander A. Dergalev & Alexander I. Alexandrov. (2021) Amyloid Fragmentation and Disaggregation in Yeast and Animals. Biomolecules 11:12, pages 1884.
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Lavrentii G. Danilov, Svetlana E. Moskalenko, Andrew G. Matveenko, Xenia V. Sukhanova, Mikhail V. Belousov, Galina A. Zhouravleva & Stanislav A. Bondarev. (2021) The Human NUP58 Nucleoporin Can Form Amyloids In Vitro and In Vivo. Biomedicines 9:10, pages 1451.
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Qi Shen, Taoran Tian, Qiancheng Xiong, Patrick D. Ellis Fisher, Yong Xiong, Thomas J. Melia, C. Patrick Lusk & Chenxiang Lin. (2021) DNA-Origami NanoTrap for Studying the Selective Barriers Formed by Phenylalanine-Glycine-Rich Nucleoporins. Journal of the American Chemical Society 143:31, pages 12294-12303.
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Tomasz Zajkowski, Michael D Lee, Shamba S Mondal, Amanda Carbajal, Robert Dec, Patrick D Brennock, Radoslaw W Piast, Jessica E Snyder, Nicholas B Bense, Wojciech Dzwolak, Daniel F Jarosz & Lynn J Rothschild. (2021) The Hunt for Ancient Prions: Archaeal Prion-Like Domains Form Amyloid-Based Epigenetic Elements. Molecular Biology and Evolution 38:5, pages 2088-2103.
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Yury A Barbitoff, Andrew G Matveenko, Anton B Matiiv, Evgeniia M Maksiutenko, Svetlana E Moskalenko, Polina B Drozdova, Dmitrii E Polev, Alexandra Y Beliavskaia, Lavrentii G Danilov, Alexander V Predeus & Galina A Zhouravleva. (2021) Chromosome-level genome assembly and structural variant analysis of two laboratory yeast strains from the Peterhof Genetic Collection lineage. G3 Genes|Genomes|Genetics 11:4.
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Anastasia Fomicheva & Eric D. Ross. (2021) From Prions to Stress Granules: Defining the Compositional Features of Prion-Like Domains That Promote Different Types of Assemblies. International Journal of Molecular Sciences 22:3, pages 1251.
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Takao Ishikawa. (2021) Saccharomyces cerevisiae in neuroscience: how unicellular organism helps to better understand prion protein?. Neural Regeneration Research 16:3, pages 489.
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Giulio Chiesa, Szilvia Kiriakov & Ahmad S. Khalil. (2020) Protein assembly systems in natural and synthetic biology. BMC Biology 18:1.
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A. B. Matiiv, N. P. Trubitsina, A. G. Matveenko, Y. A. Barbitoff, G. A. Zhouravleva & S. A. Bondarev. (2020) Amyloid and Amyloid-Like Aggregates: Diversity and the Term Crisis. Biochemistry (Moscow) 85:9, pages 1011-1034.
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Jamie D. Dixson & Rajeev K. Azad. (2020) Prions: Roles in Development and Adaptive Evolution. Journal of Molecular Evolution 88:5, pages 427-434.
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Irina L. Rempel, Anton Steen & Liesbeth M. Veenhoff. (2020) Poor old pores—The challenge of making and maintaining nuclear pore complexes in aging. The FEBS Journal 287:6, pages 1058-1075.
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Johannes Manjrekar & Hiral Shah. (2020) Protein-based inheritance. Seminars in Cell & Developmental Biology 97, pages 138-155.
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Yury O. Chernoff, Anastasia V. Grizel, Aleksandr A. Rubel, Andrew A. Zelinsky, Pavithra Chandramowlishwaran & Tatiana A. Chernova. 2020. 293 380 .
Mick F. Tuite. 2020. Phenotypic Switching. Phenotypic Switching 105 129 .
B. Tüű-Szabó, G. Hoffka, N. Duro & M. Fuxreiter. (2019) Altered dynamics may drift pathological fibrillization in membraneless organelles. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1867:10, pages 988-998.
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Ting-Yi Su & Paul M. Harrison. (2019) Conservation of Prion-Like Composition and Sequence in Prion-Formers and Prion-Like Proteins of Saccharomyces cerevisiae. Frontiers in Molecular Biosciences 6.
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Sean M. Cascarina & Eric D. Ross. (2018) Aggregation and degradation scales for prion-like domains: sequence features and context weigh in. Current Genetics 65:2, pages 387-392.
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Anupam K. Chakravarty & Daniel F. Jarosz. (2018) More than Just a Phase: Prions at the Crossroads of Epigenetic Inheritance and Evolutionary Change. Journal of Molecular Biology 430:23, pages 4607-4618.
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Dustin K Goncharoff, Zhiqiang Du & Liming Li. (2018) A brief overview of the Swi1 prion—[SWI+]. FEMS Yeast Research 18:6.
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Stanislav Bondarev, Kirill Antonets, Andrey Kajava, Anton Nizhnikov & Galina Zhouravleva. (2018) Protein Co-Aggregation Related to Amyloids: Methods of Investigation, Diversity, and Classification. International Journal of Molecular Sciences 19:8, pages 2292.
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Sean M. Cascarina, Kacy R. Paul, Satoshi Machihara & Eric D. Ross. (2018) Sequence features governing aggregation or degradation of prion-like proteins. PLOS Genetics 14:7, pages e1007517.
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Zhiqiang Du, Dustin Kenneth Goncharoff, Xudong Cheng & Liming Li. (2017) Analysis of [ SWI + ] formation and propagation events . Molecular Microbiology 104:1, pages 105-124.
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Kevin Y. Shi, Eiichiro Mori, Zehra F. Nizami, Yi Lin, Masato Kato, Siheng Xiang, Leeju C. Wu, Ming Ding, Yonghao Yu, Joseph G. Gall & Steven L. McKnight. (2017) Toxic PR n poly-dipeptides encoded by the C9orf72 repeat expansion block nuclear import and export . Proceedings of the National Academy of Sciences 114:7.
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Tinh-Suong Nguyen, Hervé Lalucque, Fabienne Malagnac & Philippe Silar. 2017. Handbook of Epigenetics. Handbook of Epigenetics 61 72 .
Edward A. Lemke. (2016) The Multiple Faces of Disordered Nucleoporins. Journal of Molecular Biology 428:10, pages 2011-2024.
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Hao Wu & Monika Fuxreiter. (2016) The Structure and Dynamics of Higher-Order Assemblies: Amyloids, Signalosomes, and Granules. Cell 165:5, pages 1055-1066.
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H. Broder Schmidt & Dirk Görlich. (2016) Transport Selectivity of Nuclear Pores, Phase Separation, and Membraneless Organelles. Trends in Biochemical Sciences 41:1, pages 46-61.
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Denis A. Kiktev, Mikhail M. Melomed, Caroline D. Lu, Gary P. Newnam & Yury O. Chernoff. (2015) Feedback control of prion formation and propagation by the ribosome-associated chaperone complex. Molecular Microbiology 96:3, pages 621-632.
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Christopher L. Lord, Benjamin L. Timney, Michael P. Rout & Susan R. Wente. (2015) Altering nuclear pore complex function impacts longevity and mitochondrial function in S. cerevisiae . Journal of Cell Biology 208:6, pages 729-744.
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Anton A. Nizhnikov, Alexander I. Alexandrov, Tatyana A. Ryzhova, Olga V. Mitkevich, Alexander A. Dergalev, Michael D. Ter-Avanesyan & Alexey P. Galkin. (2014) Proteomic Screening for Amyloid Proteins. PLoS ONE 9:12, pages e116003.
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A. M. Kondrashkina, K. S. Antonets, A. P. Galkin & A. A. Nizhnikov. (2014) Prion-like determinant [NSI +] decreases the expression of the SUP45 gene in Saccharomyces cerevisiae. Molecular Biology 48:5, pages 688-693.
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Monika Fuxreiter, Ágnes Tóth-Petróczy, Daniel A. Kraut, Andreas T. Matouschek, Roderick Y. H. Lim, Bin Xue, Lukasz Kurgan & Vladimir N. Uversky. (2014) Disordered Proteinaceous Machines. Chemical Reviews 114:13, pages 6806-6843.
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Djamel Harbi & Paul M. Harrison. (2014) Interaction Networks of Prion, Prionogenic and Prion-Like Proteins in Budding Yeast, and Their Role in Gene Regulation. PLoS ONE 9:6, pages e100615.
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Tatiana A. Chernova, Keith D. Wilkinson & Yury O. Chernoff. (2014) Physiological and environmental control of yeast prions. FEMS Microbiology Reviews 38:2, pages 326-344.
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Aaron C. Gonzalez Nelson, Kacy R. Paul, Michelina Petri, Noe Flores, Ryan A. Rogge, Sean M. Cascarina & Eric D. Ross. (2014) Increasing Prion Propensity by Hydrophobic Insertion. PLoS ONE 9:2, pages e89286.
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A. A. Nizhnikov, A. M. Kondrashkina & A. P. Galkin. (2013) Interactions of [NSI +] prion-like determinant with SUP35 and VTS1 genes in Saccharomyces cerevisiae. Russian Journal of Genetics 49:10, pages 1004-1012.
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