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Plant Signaling & Behavior Volume 7, 2012 - Issue 10
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Short Communication

Thermoplasticity in the plant circadian clock

How plants tell the time-perature

Allan B. James Institute of Molecular, Cell and Systems Biology; College of Medical, Veterinary and Life Sciences; University of Glasgow; Glasgow, ScotlandCorrespondence[email protected]
,
Naeem Hasan Syed Division of Plant Sciences; University of Dundee at The James Hutton Institute; Invergowrie, Dundee, Scotland
,
John W. S. Brown Division of Plant Sciences; University of Dundee at The James Hutton Institute; Invergowrie, Dundee, Scotland; Cell and Molecular Sciences; The James Hutton Institute; Invergowrie, Dundee, Scotland
&
Hugh G. Nimmo Institute of Molecular, Cell and Systems Biology; College of Medical, Veterinary and Life Sciences; University of Glasgow; Glasgow, Scotland
Pages 1219-1223 | Published online: 20 Aug 2012

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Corinna Streitner, Craig G. Simpson, Paul Shaw, Selahattin Danisman, John W.S. Brown & Dorothee Staiger. (2013) Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana. Plant Signaling & Behavior 8:7.
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Articles from other publishers (24)

M. C. Rodriguez Gallo, Q. Li, D. Mehta & R. G. Uhrig. (2022) Genome-scale analysis of Arabidopsis splicing-related protein kinase families reveals roles in abiotic stress adaptation. BMC Plant Biology 22:1.
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Tingting Yan, Yueqin Heng, Wenwei Wang, Jian Li & Xing Wang Deng. (2022) SWELLMAP 2, a phyB-Interacting Splicing Factor, Negatively Regulates Seedling Photomorphogenesis in Arabidopsis. Frontiers in Plant Science 13.
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Donald P. FraserPaige E. Panter, Ashutosh SharmaBhavana SharmaAntony N. Dodd & Keara A. Franklin. (2021) Phytochrome A elevates plant circadian-clock components to suppress shade avoidance in deep-canopy shade. Proceedings of the National Academy of Sciences 118:27.
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Christina B Azodi, John P Lloyd & Shin-Han Shiu. (2020) The cis-regulatory codes of response to combined heat and drought stress in Arabidopsis thaliana. NAR Genomics and Bioinformatics 2:3.
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Andrés Romanowski, Rubén G. Schlaen, Soledad Perez‐Santangelo, Estefanía Mancini & Marcelo J. Yanovsky. (2020) Global transcriptome analysis reveals circadian control of splicing events in Arabidopsis thaliana . The Plant Journal 103:2, pages 889-902.
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Luíza L. B. Dantas, Cristiane P. G. Calixto, Maira M. Dourado, Monalisa S. Carneiro, John W. S. Brown & Carlos T. Hotta. (2019) Alternative Splicing of Circadian Clock Genes Correlates With Temperature in Field-Grown Sugarcane. Frontiers in Plant Science 10.
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Paige E. Panter, Tomoaki Muranaka, David Cuitun-Coronado, Calum A. Graham, Aline Yochikawa, Hiroshi Kudoh & Antony N. Dodd. (2019) Circadian Regulation of the Plant Transcriptome Under Natural Conditions. Frontiers in Genetics 10.
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Huan Ma, Lin Zhang, Xinyang Yu, Yufeng Wan, Dongni Wang, Weirui Shi, Meiyan Huang, Manhao Xu, Enze Shen, Menghan Gao & Jinhu Guo. (2019) Regulation of the Neurospora Circadian Clock by the Spliceosome Component PRP5 . G3 Genes|Genomes|Genetics 9:11, pages 3653-3661.
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Ibtissam Jabre, Anireddy S N Reddy, Maria Kalyna, Saurabh Chaudhary, Waqas Khokhar, Lee J Byrne, Cornelia M Wilson & Naeem H Syed. (2019) Does co-transcriptional regulation of alternative splicing mediate plant stress responses?. Nucleic Acids Research 47:6, pages 2716-2726.
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Craig G. Simpson, John Fuller, Paulo Rapazote-Flores, Claus-Dieter Mayer, Cristiane P. G. Calixto, Linda Milne, Pete E. Hedley, Clare Booth, Robbie Waugh & John W. S. Brown. 2019. Barley. Barley 269 281 .
Allan B. James, Cristiane P.G. Calixto, Nikoleta A. Tzioutziou, Wenbin Guo, Runxuan Zhang, Craig G. Simpson, Wenying Jiang, Gillian A. Nimmo, John W.S. Brown & Hugh G. Nimmo. (2018) How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of LATE ELONGATED HYPOCOTYL ( LHY ) . Plant, Cell & Environment 41:7, pages 1539-1550.
Crossref
Allan B. James, Stuart Sullivan & Hugh G. Nimmo. (2018) Global spatial analysis of Arabidopsis natural variants implicates 5′UTR splicing of LATE ELONGATED HYPOCOTYL in responses to temperature . Plant, Cell & Environment 41:7, pages 1524-1538.
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Wenbin Guo, Cristiane P G Calixto, John W S Brown & Runxuan Zhang. (2017) TSIS: an R package to infer alternative splicing isoform switches for time-series data. Bioinformatics 33:20, pages 3308-3310.
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Tino Köster, Claudius Marondedze, Katja Meyer & Dorothee Staiger. (2017) RNA-Binding Proteins Revisited – The Emerging Arabidopsis mRNA Interactome. Trends in Plant Science 22:6, pages 512-526.
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C. Esteban Hernando, Andrés Romanowski & Marcelo J. Yanovsky. (2017) Transcriptional and post-transcriptional control of the plant circadian gene regulatory network. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1860:1, pages 84-94.
Crossref
Cristiane P. G. Calixto, Craig G. Simpson, Robbie Waugh & John W. S. Brown. (2016) Alternative Splicing of Barley Clock Genes in Response to Low Temperature. PLOS ONE 11:12, pages e0168028.
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Harriet G McWatters & Maria E Eriksson. 2005. Encyclopedia of Life Sciences. Encyclopedia of Life Sciences 1 10 .
Craig G. Simpson, John Fuller, Cristiane P. G. Calixto, Jim McNicol, Clare Booth, John W. S. Brown & Dorothee Staiger. 2016. Environmental Responses in Plants. Environmental Responses in Plants 119 132 .
Naeem H. Syed, Silvas J. Prince, Raymond N. Mutava, Gunvant Patil, Song Li, Wei Chen, Valliyodan Babu, Trupti Joshi, Saad Khan & Henry T. Nguyen. (2015) Core clock, SUB1 , and ABAR genes mediate flooding and drought responses via alternative splicing in soybean . Journal of Experimental Botany 66:22, pages 7129-7149.
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Giovanna Capovilla, Alice Pajoro, Richard GH Immink & Markus Schmid. (2015) Role of alternative pre-mRNA splicing in temperature signaling. Current Opinion in Plant Biology 27, pages 97-103.
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Andrés Romanowski & Marcelo J. Yanovsky. (2015) Circadian rhythms and post-transcriptional regulation in higher plants. Frontiers in Plant Science 6.
Crossref
Chiara A. Airoldi, Mary McKay & Brendan Davies. (2015) MAF2 Is Regulated by Temperature-Dependent Splicing and Represses Flowering at Low Temperatures in Parallel with FLM. PLOS ONE 10:5, pages e0126516.
Crossref
Keara A. Franklin, Gabriela Toledo-Ortiz, Douglas E. Pyott & Karen J. Halliday. (2014) Interaction of light and temperature signalling. Journal of Experimental Botany 65:11, pages 2859-2871.
Crossref
Osnat Bartok, Charalambos P. Kyriacou, Joel Levine, Amita Sehgal & Sebastian Kadener. (2013) Adaptation of molecular circadian clockwork to environmental changes: a role for alternative splicing and miRNAs. Proceedings of the Royal Society B: Biological Sciences 280:1765, pages 20130011.
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