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Article

Concentration and Localization of Coexpressed ELAV/Hu Proteins Control Specificity of mRNA Processing

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Pages 3104-3115 | Received 12 May 2015, Accepted 10 Jun 2015, Published online: 20 Mar 2023
 

Abstract

Neuronally coexpressed ELAV/Hu proteins comprise a family of highly related RNA binding proteins which bind to very similar cognate sequences. How this redundancy is linked to in vivo function and how gene-specific regulation is achieved have not been clear. Analysis of mutants in Drosophila ELAV/Hu family proteins ELAV, FNE, and RBP9 and of genetic interactions among them indicates that they have mostly independent roles in neuronal development and function but have converging roles in the regulation of synaptic plasticity. Conversely, ELAV, FNE, RBP9, and human HuR bind ELAV target RNA in vitro with similar affinities. Likewise, all can regulate alternative splicing of ELAV target genes in nonneuronal wing disc cells and substitute for ELAV in eye development upon artificially increased expression; they can also substantially restore ELAV's biological functions when expressed under the control of the elav gene. Furthermore, ELAV-related Sex-lethal can regulate ELAV targets, and ELAV/Hu proteins can interfere with sexual differentiation. An ancient relationship to Sex-lethal is revealed by gonadal expression of RBP9, providing a maternal fail-safe for dosage compensation. Our results indicate that highly related ELAV/Hu RNA binding proteins select targets for mRNA processing through alteration of their expression levels and subcellular localization but only minimally by altered RNA binding specificity.

Supplemental material for this article may be found at http://dx.doi.org/10.1128/MCB.00473-15.

ACKNOWLEDGMENTS

We thank the Bloomington, Exilixis/Harvard, and Kyoto stock centers and S. Goodwin, J. Simpson, J. Kim, J. Horabin, H. Richardson, and G. Toba for fly lines, M.-L. Samson and Developmental Hybridoma Studies Bank for antibodies, FlyBase for RNA-Seq data, J. Colburn for discussions, and S. Vilain for comments on the manuscript.

For this work we acknowledge funding from the BBSRC and the Wellcome Trust.

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