Avian pathogenic Escherichia coli - methods for improved diagnosis

References

• ALEXA, P., SALAJKA, E., HAMRIK, J. and NEJEZCHLEB, A. (1995) Pathogenic strains of Escherichia coli in weaned piglets in the Czech Republic. Pig News and Information 16 (3): 81N-84N.
   Google Scholar
• BABAI, R., STERN, B.E., HACKER, J. and RON, E.Z. (2000) New fimbrial gene cluster of S-fimbrial adhesin family. Infection and Immunity 68 (10): 5901-5907.
   PubMed Web of Science ®Google Scholar
• BALSAM, J., OSSANDON, M., BRUCK, H.A., LUBENSKY, I. and RASOOLY, A. (2013) Low-cost technologies for medical diagnostics in low-resource settings. Expert Opinion on Medical Diagnostics 7 (3): 243-255.
   PubMedGoogle Scholar
• BARBIERI, N.L., OLIVEIRA, A.L., TEJKOWSKI, T.M., PAVANELO, D.B., ROCHA, D.A., MATTER, L.B., CALLEGARI-JACQUES, S.M., BRITO, B.G. and HORN, F. (2013) Genotypes and Pathogenicity of Cellulitis Isolates Reveal Traits That Modulate APEC Virulence. PLoS ONE 8 (8): e72322.
   PubMed Web of Science ®Google Scholar
• BARNES, H.J. (1994) Colibacillosis in Poultry, in: PFIZER ANIMAL HEALTH (Ed) Pfizer Veterinary Practicum, 3rd, pp. 45 (North American Animal Health Division, Lee's Summit, Missouri).
   Google Scholar
• BARNES, H.J., NOLAN, L.K. and VAILLANCOURT, J.P. (2008) Colibacillosis, in: SAIF, Y.M. (Ed) Diseases of Poultry, 12th, pp. 691-732 (Ed. Blackwell Publishing, Ames, IA).
   Google Scholar
• BELL, C.J., FINLAY, D.A., CLARKE, H.J., TAYLOR, M.J. and BALL, H.J. (2002) Development of a sandwich ELISA and comparison with PCR for the detection of F11 and F165 fimbriated Escherichia coli isolates from septicemic disease in farm animals. Veterinary Microbiology 85 (3): 251-257.
   PubMed Web of Science ®Google Scholar
• BETTELHEIM, K.A. (1994) Biochemical Characteristics of E. coli, in: GYLES, C.L. (Ed) Escherichia coli in domestic animals and humans, pp. 3-30 (Guelph, Cab International).
   Google Scholar
• BLANCO, M., BLANCO, J., BLANCO, J.E. and RAMOS, J. (1993) Enterotoxigenic, verotoxigenic and necrotoxigenic Escherichia coli isolated from cattle in Spain. American Journal of Veterinary Research 54 (9): 1446-1451.
   PubMed Web of Science ®Google Scholar
• BLISS, J.M., GARON, C.F. and SILVER, R.P. (1996) Polysialic acid export in Escherichia coli K1: the role of KpsT, the ATP-binding component of na ABC transporter, in chain translocation. Glycobiology 6 (4): 445-452.
   PubMed Web of Science ®Google Scholar
• BREE, A., DHO, M. and LAFONT, J.P. (1989) Comparative infectivity of axenic and specific pathogen free chickens of O2 E. coli strains with or without virulence factors. Avian Diseases 33 (1): 134-139.
   PubMed Web of Science ®Google Scholar
• BRITO, B.G., GAZIRI, L.C.J. and VIDOTTO, M.C. (2003) Virulence factors and clonal relationships among Escherichia coli strains isolated from broiler chickens with cellulites. Infection and Immunity 71 (7): 4175-4177.
   PubMed Web of Science ®Google Scholar
• CARSON, C.A., SHEAR, B.L., ELLERSIECK, M.R. and ASFAW, A. (2001) Identification of Fecal Escherichia coli from Humans and Animals by Ribotyping. Applied and Environmental Microbiology 67 (4): 1503-1507.
   PubMed Web of Science ®Google Scholar
• CLERMONT, O., BONACORSI, S. and BINGEN, E. (2000) Rapid and Simple Determination of the Escherichia coli Phylogenetic Group. Applied and Environmental Microbiology 66 (10): 4555-4558.
   PubMed Web of Science ®Google Scholar
• CONNER, D.E. and HALL, G.S. (1994) Efficacy of selected media for recovery of Escherichia coli O157:H7 from frozen chicken meat containing sodium chloride, sodium lactate or polyphosphate. Food Microbiology 11 (4): 337-344.
   Web of Science ®Google Scholar
• DHAMA, K., CHAKRABORTY, S., BARATHIDASAN, R., TIWARI, R., RAJAGUNALAN, S. and SINGH, S.D. (2013) Escherichia coli, an economically important avian pathogen, its disease manifestations, diagnosis and control, and public health significance: A review. Research Opinions in Animal and Veterinary Sciences 3 (6): 179-194.
   Google Scholar
• DHO-MOULIN, M. and LAFONT, J.P. (1982) Escherichia coli colonisation of the trachea in poultry: Comparison of virulent and avirulent strains in gnotoxenic chickens. Avian Disease 26 (4): 787-797.
   PubMed Web of Science ®Google Scholar
• DHO-MOULIN, M. and FAIRBROTHER, J.M. (1999) Avian pathogenic Escherichia coli (APEC). Veterinary Research 30 (2-3): 299-316.
   PubMed Web of Science ®Google Scholar
• DZIVA, F. and STEVENS, M.P. (2008) Colibacillosis in poultry: unravelling the molecular basis of virulence of avian pathogenic Escherichia coli in their natural hosts. Avian Pathology 37 (4): 355-366.
   PubMed Web of Science ®Google Scholar
• EWERS, C., LI, G., WILKING, H., KIESSLING, S., ALT, K., ANTÃO, E.M., LATURNUS, C., DIEHL, I., GLODDE, S., HOMEIER, T., BÖHNKE, U., STEINRÜCK, H., PHILIPP, H.C. and WIELER, L.H. (2007) Avian pathogenic, uropathogenic, and newborn meningitis-causing Escherichia coli: How closely related are they? International Journal of Medical Microbiology 297 (3): 163-176.
   PubMed Web of Science ®Google Scholar
• EWING, W.H. (1986) The genus Escherichia, in: EDWARDS, P.R. & EWING, W.H. (Eds) Edwards and Ewing's identification of enterobacteriaceae, 4th, chap. 6, pp. 93-134 (New York: Elsevier Science Publishing).
   Google Scholar
• FUJISAWA, T., SATA, S., AIKAWA, K., TAKAHASHI, T., YAMAI, S. and SHIMADA T. (2000) Modification of sorbitol MacConkey medium containing cefixime and tellurite for isolation of Escherichia coli O157:H7 from radish sprouts. Applied and Environmental Microbiology 66 (7): 3117-3118.
   PubMed Web of Science ®Google Scholar
• FUJISAWA, T., SATA, S., AIKAWA, K., TAKAHASHI, T., YAMAI, S. and SHIMADA, T. (2002) Evaluation of sorbitol-salicin MacConkey medium containing cefixime and tellurite (CT-SSMAC medium) for isolation of Escherichia coli O157:H7 from raw vegetables. International Journal of Food Microbiology 74 (1-2): 161-163.
   PubMed Web of Science ®Google Scholar
• GAN, S.D. and PATEL, K.R. (2013) Enzyme Immunoassay and Enzyme-Linked Immunosorbent Assay. Journal of Investigative Dermatology 133 (9): e12.
   PubMed Web of Science ®Google Scholar
• GILSON, E., CLÉMENT, J.M., BRUTLAG, D. and HOFNUNG, M. (1984) A family of dispersed repetitive extragenic palindromic DNA sequences in Escherichia coli. The EMBO Journal 3 (6): 1417-1421.
   PubMed Web of Science ®Google Scholar
• GOMIS, S.M., RIDDELL, C., POTTER, A.A. and ALLAN, B.J. (2001) Phenotypic and genotypic characterisation of virulence factors of Escherichia coli isolated from broiler chickens with simultaneous occurrence of cellulitis and other colibacillosis lesions. Canadian Journal of Veterinary Research 65 (1): 1-6.
   PubMed Web of Science ®Google Scholar
• GOREN, E. (1978) Observations on experimental infections of chicks with Escherichia coli. Avian Pathology 7 (2): 213-224.
   PubMed Web of Science ®Google Scholar
• GROSS, W.B. (1994) Diseases due to Escherichia coli in poultry, in: GYLES, C.L. (Ed) E. coli in domestic animals and man, pp. 237-259 (Wallingford, UK: CAB International).
   Google Scholar
• HOLT-HARRIS, J.E. and TEAGUE, O. (1916) A new culture medium for the isolation of Bacillus typhosus from stools. The Journal of Infectious Disease 18 (6): 596-600.
   Google Scholar
• HULTON, C.S., HIGGINS, C.F. and SHARP, P.M. (1991) ERIC sequences: a novel family of repetitive elements in the genomes of Escherichia coli, Salmonella typhimurium and other enterobacteria. Molecular Microbiology 5 (4): 825-834.
   PubMed Web of Science ®Google Scholar
• JEONG, Y.W., KIM, T.E., KIM, J.H. and KWON, H.J. (2012) Pathotyping avian pathogenic Escherichia coli strains in Korea. Journal of Veterinary Science 13 (2): 145-152.
   PubMed Web of Science ®Google Scholar
• JOHNSON, T.J., WANNEMUEHLER, Y., DOETKOTT, C., JOHNSON, S.J., ROSENBERGER, S.C. and NOLAN, L.K. (2008) Identification of Minimal Predictors of Avian Pathogenic Escherichia coli Virulence for Use as a Rapid Diagnostic Tool. Journal of Clinical Microbiology 46 (12): 3987-3996.
   PubMed Web of Science ®Google Scholar
• KABIR, S.M.L. (2010) Avian colibacillosis and salmonellosis: a closer look at the epidemiology, pathogenesis, diagnosis, control and public health concerns. International Journal of Environmental Research and Public Health 7 (1): 89-114.
   PubMed Web of Science ®Google Scholar
• KAPER, J.B., NATARO, J.P. and MOBLEY, H.L.T. (2004) Pathogenic Escherichia coli. Nature Reviews Microbiology 2 (2): 123-140.
   PubMed Web of Science ®Google Scholar
• LA RAGIONE, R.M., COOLEY, W.A. and WOODWARD, M.J. (2000a) The role of fimbriae and flagella in the adherence of avian strains of Escherichia coli O78:K80 to tissue culture cells and tracheal and gut explants. Journal of Medical Microbiology 49 (4): 327-338.
   PubMed Web of Science ®Google Scholar
• LA RAGIONE, R.M., SAYERS, A.R. and WOODWARD, M.J. (2000b) The role of fimbriae and flagella in the colonisation, invasion and persistence of Escherichia coli O78:K80 in the day-old-chick model. Epidemiology and Infection 124 (3): 351-363.
   PubMed Web of Science ®Google Scholar
• LA RAGIONE, R.M., MCLAREN, I., FOSTER, G., COOLEY, W.A. and WOODWARD, M.J. (2002) Phenotypic and genotypic characterisation of avian Escherichia coli O86:K61 isolates possessing a gamma-like intimin. Applied and Environmental Microbiology 68 (10): 4932-4942.
   PubMed Web of Science ®Google Scholar
• LEITNER, G., MELAMED, D., DRABKIN, N. and HELLER, E.D. (1990) An enzyme-linked immunosorbent assay for detection of antibodies against Escherichia coli: association between indirect hemagglutination test and survival. Avian Disease 34 (1): 58-62.
   PubMed Web of Science ®Google Scholar
• LEVINE, M. (1918) Differentiation of B. coli and B. aerogenes on a simplified eosin-methylene blue agar. The Journal of Infectious Disease 23 (1): 43-47.
   Google Scholar
• LIOR, H. (1994) Classification of Escherichia coli, in: GYLES C.L. (Ed) Escherichia coli in Domestic Animals and Humans, p. 31-72 (United Kingdom: Cab International).
   Google Scholar
• LYMBEROPOULOS, M.H., HOULE, S., DAIGLE, F., LEVEILLE, S., BREE, A., MOULIN-SCHOULEUR, M., JOHNSON, J.R. and DOZOIS, C.M. (2006) Characterisation of Stg fimbriae from an avian pathogenic Escherichia coli O78:K80 strain and assessment of their contribution to colonisation of the chicken respiratory tract. Journal of Bacteriology 188 (18): 6449-6459.
   PubMed Web of Science ®Google Scholar
• MACFADDEN, J.F. (1985) Eosin methylene blue agars, in: BUTLER, J. (Ed) Media for the isolation-cultivation-identification-maintenance of medical bacteria, Vol. 1, pp. 292-297 (Williams & Wilkins, Baltimore, MD).
   Google Scholar
• McCARTHY, J., HOLBROOK, R. and STEPHENS, P.J. (1998) An improved direct plate method for the enumeration of stressed Escherichia coli O157:H7 from food. Journal of Food Protection 61 (9): 1093-1097.
   PubMed Web of Science ®Google Scholar
• MELLATA, M., MADDUX, J.T., NAM, T., THOMSON, N., HAUSER, H., STEVENS, M.P., MUKHOPADHYAY, S., SARKER, S., CRABBÉ, A., NICKERSON, C.A., SANTANDER, J. and CURTISS, R. (2012) New Insights into the Bacterial Fitness-Associated Mechanisms Revealed by the Characterisation of Large Plasmids of an Avian Pathogenic E. coli. PLoS ONE 7 (1): e29481.
   Google Scholar
• MOSSEL, D.A.A., MENGERINK, W.H.J. and SCHOLTS, H.H. (1962) Use of a modified MacConkey agar medium for the selective growth and enumeration of Enterobacteriaceae. Journal of Bacteriology 84 (2): 381.
   PubMed Web of Science ®Google Scholar
• MOULIN-SCHOULEUR, M., RÉPÉRANT, M., LAURENT, S., BRÉE, A., MIGNON-GRASTEAU, S., GERMON, P., RASSCHAERT, D. and SCHOULER, C. (2007) Extraintestinal Pathogenic Escherichia coli Strains of Avian and Human Origin: Link between Phylogenetic Relationships and Common Virulence Patterns. Journal of Clinical Microbiology 45 (10): 3366-3376.
   PubMed Web of Science ®Google Scholar
• NAKAZATO, G., CAMPOS, T.A., STEHLING, E.G., BROCCHI, M. and SILVEIRA, W.D. (2009) Virulence factors of avian pathogenic Escherichia coli (APEC). Pesquisa Veterinária Brasileira 29 (7): 479-486.
   Web of Science ®Google Scholar
• ORSKOV, F. and ORSKOV, L. (1992) Escherichia coli serotyping and disease in man and animals. Canadian Journal of Microbiology 38 (7): 699-704.
   PubMed Web of Science ®Google Scholar
• PARK, S.H., RYU, S. and KANG, D.H. (2010) Improved Selective and Differential Medium for Isolation of Escherichia coli O157:H7. Journal of Clinical Microbiology 49 (1): 405-408.
   PubMed Web of Science ®Google Scholar
• PEIGHAMBARI, S.M., JULIAN, R.J., VAILLANCOURT, J.P. and GYLES, C.L. (1995) Escherichia coli cellulitis: experimental infections in broiler chickens. Avian Diseases 39 (1): 125-134.
   PubMed Web of Science ®Google Scholar
• PEREPELOV, A.V., HAN, W., SENCHENKOVA, S.N., SHEVELEV, S.D., SHASHKOV, A.S., FENG, L., LIU, Y., KNIREL, Y.A. and WANG, L. (2007) Structure of the O-polysaccharide of Escherichia coli O150 containing 2-acetamido-4-O-[(S)-1-carboxyethyl]-2-deoxy-D-glucose. Carbohydrate Research 342 (1-2): 648-652.
   PubMed Web of Science ®Google Scholar
• PIERCY, D.W. and WEST, B. (1976) Experimental Escherichia coli infection in broiler chickens: course of the disease induced by inoculation via the air sac route. Journal of Comparative Pathology 86 (2): 203-210.
   PubMed Web of Science ®Google Scholar
• POURBAKHSH, S.A., DHO-MOULIN, M., BREE, A., DESAUTELS, C., MARTINEAU-DOIZE, B. and FAIRBROTHER, J.M. (1997) Localisation of the in vivo expression of P and F1 fimbriae in chickens experimentally inoculated with pathogenic E. coli. Microbial Pathogenesis 22 (6): 331-341.
   PubMed Web of Science ®Google Scholar
• RAY, B. and ADAMS, D.M. (1984) Repair and detection of injured microorganisms, in: SPECK, M.L. (Ed) Compendium of methods for the microbiological examination of foods, pp. 112-123 (American Public Health Association, Washington, DC).
   Google Scholar
• ROJAS, T.C.G., MALUTA, R.P., KOENIGKAN, L.V. and SILVEIRA, W.D. (2014) In silico phylogenetic and virulence gene profile analyses of avian pathogenic Escherichia coli genome sequences. Pesquisa Veterinária Brasileira 34 (2): 129-133.
   Web of Science ®Google Scholar
• SCHMITZ, S., ABE, C., MOSER, I., ORSKOV, I., ORSKOV, F., JANN, B. and JANN, K. (1986) Monoclonal antibodies against the nonhemagglutinating fimbrial antigen 1C (pseudotype 1) of Escherichia coli. Infection and Immunity 51 (1): 54-59.
   PubMed Web of Science ®Google Scholar
• SCHOULER, C., SCHAEFFER, B., BRÉE, A., MORA, A., DAHBI, G., BIET, F., OSWALD, E., MAINIL, J., BLANCO, J. and MOULIN-SCHOULEUR, M. (2012) Diagnostic Strategy for Identifying Avian Pathogenic Escherichia coli Based on Four Patterns of Virulence Genes. Journal of Clinical Microbiology 50 (5): 1673-1678.
   PubMed Web of Science ®Google Scholar
• SMITH, H.W., COOK, J.K. and PARSELL, Z.E. (1985) The experimental infection of chickens with mixtures of infectious bronchitis virus and Escherichia coli. Journal of General Virology 66 (4): 777-786.
   PubMed Web of Science ®Google Scholar
• STACY, A.K., MITCHELL, N.M., MADDUX, J.T., DE LA CRUZ, M.A., DURÁN, L., GIRÓN, J.A., CURTISS, R. and MELLATA, M. (2014) Evaluation of the Prevalence and Production of Escherichia coli Common Pilus among Avian Pathogenic E. coli and Its Role in Virulence. PLoS ONE 9 (1): e86565.
   PubMed Web of Science ®Google Scholar
• TAORMINA, P.J., CLAVERO, M.R.S. and BEUCHAT, L.R. (1998) Comparison of selective agar media and enrichment broths for recovering heat-stressed E. coli O157:H7 from ground beef. Food Microbiology 15 (6): 631-638.
   Web of Science ®Google Scholar
• VAN DEN BOSCH, J.F., HENDRIKS, J.H.I.M., GLADIGAU, I., WILLEMS, H.M.C., STORM, P.K. and DE GRAFF, F.K. (1993) Identification of F11 fimbriae in chicken Escherichia coli strains. Infection and Immunity 61 (3): 800-806.
   PubMed Web of Science ®Google Scholar
• VERSALOVIC, J., KOEUTH, T. and LUPSKI, J.R. (1991) Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Research 19 (24): 6823-6831.
   PubMed Web of Science ®Google Scholar
• VINCENT, C., BOERLIN, P., DAIGNAULT, D., DOZOIS, C.M., DUTIL, L., GALANAKIS, C., REID-SMITH, R.J., TELLIER, P.P., TELLIS, P.A., ZIEBELL, K. and MANGES, A.R. (2010) Emerging Infectious Diseases Journal 16 (1): 88-95.
   PubMed Web of Science ®Google Scholar
• YERUSHALMI, Z., SMODODINSKY, N.I., NAVEH, M.W. and RON, E.Z. (1990) Adherence pili of avian strains of Escherichia coli O78. Infection and Immunity 58 (4): 1129-1130.
   PubMed Web of Science ®Google Scholar