Novel and classical human astroviruses in stool and cerebrospinal fluid: comprehensive screening in a tertiary care hospital, Switzerland

References

• Finkbeiner SR, Holtz LR, Jiang Yet al.Human stool contains a previously unrecognized diversity of novel astroviruses. Virol J 2009;6: 161.
   PubMed Web of Science ®Google Scholar
• Johnson C, Hargest V, Cortez Vet al.Astrovirus pathogenesis. Viruses 2017;9: 22.
   PubMed Web of Science ®Google Scholar
• Guix S, Caballero S, Villena Cet al.Molecular epidemiology of astrovirus infection in Barcelona, Spain. J Clin Microbiol 2002;40: 133–139.
   PubMed Web of Science ®Google Scholar
• Moser LA, Schultz-Cherry S.Pathogenesis of astrovirus infection. Viral Immunol 2005;18: 4–10.
   PubMed Web of Science ®Google Scholar
• Borrows CL, Turner PC.Seasonal screening for viral gastroenteritis in young children and elderly hospitalized patients: is it worthwhile? J Hosp Infect 2014;87: 98–102.
   PubMed Web of Science ®Google Scholar
• Gray JJ, Wreghitt TG, Cubitt WDet al.An outbreak of gastroenteritis in a home for the elderly associated with astrovirus type 1 and human calicivirus. J Med Virol 1987;23: 377–381.
   PubMed Web of Science ®Google Scholar
• Jarchow-Macdonald AA, Halley S, Chandler Det al.First report of an astrovirus type 5 gastroenteritis outbreak in a residential elderly care home identified by sequencing. J Clin Virol 2015;73: 115–119.
   PubMed Web of Science ®Google Scholar
• Coppo P, Scieux C, Ferchal Fet al.Astrovirus enteritis in a chronic lymphocytic leukemia patient treated with fludarabine monophosphate. Ann Hematol 2000;79: 43–45.
   PubMed Web of Science ®Google Scholar
• Wood DJ, David TJ, Chrystie ILet al.Chronic enteric virus infection in two T-cell immunodeficient children. J Med Virol 1988;24: 435–444.
   PubMed Web of Science ®Google Scholar
• Wunderli W, Meerbach A, Gungor Tet al.Astrovirus infection in hospitalized infants with severe combined immunodeficiency after allogeneic hematopoietic stem cell transplantation. PLoS ONE 2011;6: e27483.
   PubMed Web of Science ®Google Scholar
• Bosch A, Pinto RM, Guix S.Human astroviruses. Clin Microbiol Rev 2014;27: 1048–1074.
   PubMed Web of Science ®Google Scholar
• Koopmans MP, Bijen MH, Monroe SSet al.Age-stratified seroprevalence of neutralizing antibodies to astrovirus types 1 to 7 in humans in the Netherlands. Clin Diagn Lab Immunol 1998;5: 33–37.
   PubMedGoogle Scholar
• Kriston S, Willcocks MM, Carter MJet al.Seroprevalence of astrovirus types 1 and 6 in London, determined using recombinant virus antigen. Epidemiol Infect 1996;117: 159–164.
   PubMed Web of Science ®Google Scholar
• Vu DL, Cordey S, Brito Fet al.Novel human astroviruses: novel human diseases? J Clin Virol 2016;82: 56–63.
   PubMed Web of Science ®Google Scholar
• Holtz LR, Bauer IK, Rajendran Pet al.Astrovirus MLB1 is not associated with diarrhea in a cohort of Indian children. PLoS ONE 2011;6: e28647.
   PubMed Web of Science ®Google Scholar
• Khamrin P, Thongprachum A, Okitsu Set al.Multiple astrovirus MLB1, MLB2, VA2 clades, and classic human astrovirus in children with acute gastroenteritis in Japan. J Med Virol 2016;88: 356–360.
   PubMed Web of Science ®Google Scholar
• Meyer CT, Bauer IK, Antonio Met al.Prevalence of classic, MLB-clade and VA-clade astroviruses in Kenya and The Gambia. Virol J 2015;12: 78.
   PubMed Web of Science ®Google Scholar
• Xavier Mda P, Carvalho Costa FA, Rocha MSet al.Surveillance of human astrovirus infection in Brazil: the first report of MLB1 astrovirus. PLoS One 2015;10: e0135687.
   PubMed Web of Science ®Google Scholar
• Brown JR, Morfopoulou S, Hubb Jet al.Astrovirus VA1/HMO-C: an increasingly recognized neurotropic pathogen in immunocompromised patients. Clin Infect Dis 2015;60: 881–888.
   PubMed Web of Science ®Google Scholar
• Cordey S, Vu DL, Schibler Met al.Astrovirus MLB2, a new gastroenteric virus associated with meningitis and disseminated infection. Emerg Infect Dis 2016;22: 846–853.
   PubMed Web of Science ®Google Scholar
• Fremond ML, Perot P, Muth Eet al.Next-generation sequencing for diagnosis and tailored therapy: a case report of astrovirus-associated progressive encephalitis. J Pediatric Infect Dis Soc 2015;4: e53–e57.
   PubMed Web of Science ®Google Scholar
• Naccache SN, Peggs KS, Mattes FMet al.Diagnosis of neuroinvasive astrovirus infection in an immunocompromised adult with encephalitis by unbiased next-generation sequencing. Clin Infect Dis 2015;60: 919–923.
   PubMed Web of Science ®Google Scholar
• Quan PL, Wagner TA, Briese Tet al.Astrovirus encephalitis in boy with X-linked agammaglobulinemia. Emerg Infect Dis 2010;16: 918–925.
   PubMed Web of Science ®Google Scholar
• Sato M, Kuroda M, Kasai Met al.Acute encephalopathy in an immunocompromised boy with astrovirus-MLB1 infection detected by next generation sequencing. J Clin Virol 2016;78: 66–70.
   PubMed Web of Science ®Google Scholar
• Cordey S, Brito F, Vu DLet al.Astrovirus VA1 identified by next-generation sequencing in a nasopharyngeal specimen of a febrile Tanzanian child with acute respiratory disease of unknown etiology. Emerg Microbes Infect 2016;5: e99.
   PubMed Web of Science ®Google Scholar
• Schibler M, Yerly S, Vieille Get al.Critical analysis of rhinovirus RNA load quantification by real-time reverse transcription-PCR. J Clin Microbiol 2012;50: 2868–2872.
   PubMed Web of Science ®Google Scholar
• Logan C, O’Leary JJ, O’Sullivan N.Real-time reverse transcription PCR detection of norovirus, sapovirus and astrovirus as causative agents of acute viral gastroenteritis. J Virol Methods 2007;146: 36–44.
   PubMed Web of Science ®Google Scholar
• Noel JS, Lee TW, Kurtz JBet al.Typing of human astroviruses from clinical isolates by enzyme immunoassay and nucleotide sequencing. J Clin Microbiol 1995;33: 797–801.
   PubMed Web of Science ®Google Scholar
• Hoehne M, Schreier E.Detection of Norovirus genogroup I and II by multiplex real-time RT- PCR using a 3'-minor groove binder-DNA probe. BMC Infect Dis 2006;6: 69.
   PubMed Web of Science ®Google Scholar
• Freeman MM, Kerin T, Hull Jet al.Enhancement of detection and quantification of rotavirus in stool using a modified real-time RT-PCR assay. J Med Virol 2008;80: 1489–1496.
   PubMed Web of Science ®Google Scholar
• Tapparel C, Cordey S, Van Belle Set al.New molecular detection tools adapted to emerging rhinoviruses and enteroviruses. J Clin Microbiol 2009;47: 1742–1749.
   PubMed Web of Science ®Google Scholar
• Verheyen J, Timmen-Wego M, Laudien Ret al.Detection of adenoviruses and rotaviruses in drinking water sources used in rural areas of Benin, West Africa. Appl Environ Microbiol 2009;75: 2798–2801.
   PubMed Web of Science ®Google Scholar
• Holtz LR, Wylie KM, Sodergren Eet al.Astrovirus MLB2 viremia in febrile child. Emerg Infect Dis 2011;17: 2050–2052.
   PubMed Web of Science ®Google Scholar
• Meliopoulos VA, Marvin SA, Freiden Pet al.Oral administration of astrovirus capsid protein is sufficient to induce acute diarrhea in vivo. mBio 2016;7: e01494–16.
   PubMed Web of Science ®Google Scholar
• Pativada M, Nataraju SM, Ganesh Bet al.Emerging trends in the epidemiology of human astrovirus infection among infants, children and adults hospitalized with acute watery diarrhea in Kolkata, India. Infect Genet Evol 2012;12: 1685–1693.
   PubMed Web of Science ®Google Scholar