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Original Articles

Genomic characterization and infectivity of a novel SARS-like coronavirus in Chinese bats

, , , , , , , , , , , , , & show all
Pages 1-10 | Received 10 Apr 2018, Accepted 02 Aug 2018, Published online: 12 Sep 2018

References

  • CuiJEvolutionary relationships between bat coronaviruses and their hostsEmerg. Infect. Dis.200713 1526 1532285150310.3201/eid1310.070448
  • PerlmanSNetlandJCoronaviruses post-SARS: update on replication and pathogenesisNat. Rev. Microbiol.20097439450283009510.1038/nrmicro2147
  • ChineseSMECMolecular evolution of the SARS coronavirus during the course of the SARS epidemic in ChinaScience20043031666166910.1126/science.1092002
  • ZhongNSEpidemiology and cause of severe acute respiratory syndrome (SARS) in Guangdong, People’s Republic of China, in February, 2003Lancet20033621353135810.1016/S0140-6736(03)14630-2
  • MarraMAThe genome sequence of the SARS-associated coronavirusScience20033001399140410.1126/science.1085953
  • XuYCrystal structure of severe acute respiratory syndrome coronavirus spike protein fusion coreJ. Biol. Chem.2004279494144941910.1074/jbc.M408782200
  • SongHDCross-host evolution of severe acute respiratory syndrome coronavirus in palm civet and humanProc. Natl. Acad. Sci. U. S. A.20051022430243554895910.1073/pnas.0409608102
  • KanBMolecular evolution analysis and geographic investigation of severe acute respiratory syndrome coronavirus-like virus in palm civets at an animal market and on farmsJ. Virol.2005791189211900121260410.1128/JVI.79.18.11892-11900.2005
  • PoonLLIdentification of a novel coronavirus in batsJ. Virol.2005792001200954658610.1128/JVI.79.4.2001-2009.2005
  • WynneJWWangLFBats and viruses: friend or foe?PLoS. Pathog.20139e1003651381467610.1371/journal.ppat.1003651
  • WongSLauSWooPYuenKYBats as a continuing source of emerging infections in humansRev. Med. Virol.200717679110.1002/rmv.520
  • LauSKSevere acute respiratory syndrome coronavirus-like virus in Chinese horseshoe batsProc. Natl. Acad. Sci. U. S. A.20051021404014045123658010.1073/pnas.0506735102
  • GeXYIsolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptorNature2013503535538538986410.1038/nature12711
  • YangXLIsolation and characterization of a novel bat coronavirus closely related to the direct progenitor of severe acute respiratory syndrome coronavirusJ. Virol.2015903253325610.1128/JVI.02582-15
  • DrexlerJFGenomic characterization of severe acute respiratory syndrome-related coronavirus in European bats and classification of coronaviruses based on partial RNA-dependent RNA polymerase gene sequencesJ. Virol.2010841133611349295316810.1128/JVI.00650-10
  • RihtaricDHostnikPSteyerAGromJToplakIIdentification of SARS-like coronaviruses in horseshoe bats (Rhinolophus hipposideros) in SloveniaArch. Virol.201015550751410.1007/s00705-010-0612-5
  • BalboniAPalladiniABoglianiGBattilaniMDetection of a virus related to betacoronaviruses in Italian greater horseshoe batsEpidemiol. Infect.201113921621910.1017/S0950268810001147
  • TongSDetection of novel SARS-like and other coronaviruses in bats from KenyaEmerg. Infect. Dis.200915482485268112010.3201/eid1503.081013
  • QuanPLIdentification of a severe acute respiratory syndrome coronavirus-like virus in a leaf-nosed bat in NigeriamBio20101pii: e00208pii: e0021010.1128/mBio.00208-10
  • WooPCMolecular diversity of coronaviruses in batsVirology200635118018710.1016/j.virol.2006.02.041
  • HuBGeXWangLFShiZBat origin of human coronavirusesVirol. J.201512221468730410.1186/s12985-015-0422-1
  • HuDVirome analysis for identification of novel mammalian viruses in bats from Southeast ChinaSci. Rep.20177558994610.1038/s41598-017-11384-w
  • IrwinDMKocherTDWilsonACEvolution of the cytochrome b gene of mammalsJ. Mol. Evol.19913212814410.1007/BF02515385
  • LauSKSevere acute respiratory syndrome (SARS) coronavirus ORF8 protein is acquired from SARS-related coronavirus from greater horseshoe bats through recombinationJ. Virol.2015891053210547458017610.1128/JVI.01048-15
  • TongSChernSWLiYPallanschMAAndersonLJSensitive and broadly reactive reverse transcription-PCR assays to detect novel paramyxovirusesJ. Clin. Microbiol.20084626522658251949810.1128/JCM.00192-08
  • FouchierRADetection of influenza A viruses from different species by PCR amplification of conserved sequences in the matrix geneJ. Clin. Microbiol.2000384096410187547
  • DrexlerJFCormanVMDrostenCEcology, evolution and classification of bat coronaviruses in the aftermath of SARSAntivir. Res.2014101455610.1016/j.antiviral.2013.10.013
  • HuBDiscovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirusPLoS. Pathog.201713e1006698570862110.1371/journal.ppat.1006698
  • WuZDeciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseasesIsme. J.20161060962010.1038/ismej.2015.138
  • LauSKEcoepidemiology and complete genome comparison of different strains of severe acute respiratory syndrome-related Rhinolophus bat coronavirus in China reveal bats as a reservoir for acute, self-limiting infection that allows recombination eventsJ. Virol.20108428082819282603510.1128/JVI.02219-09
  • LiWReceptor and viral determinants of SARS-coronavirus adaptation to human ACE2EMBO J.20052416341643114257210.1038/sj.emboj.7600640
  • LiFEvidence for a common evolutionary origin of coronavirus spike protein receptor-binding subunitsJ. Virol.20128628562858330224810.1128/JVI.06882-11
  • MenacheryVDSARS-like WIV1-CoV poised for human emergenceProc. Natl. Acad. Sci. USA20161133048305310.1073/pnas.1517719113
  • KsiazekTGA novel coronavirus associated with severe acute respiratory syndromeN. Engl. J. Med.20033481953196610.1056/NEJMoa030781
  • LauSKComplete genome sequence of bat coronavirus HKU2 from Chinese horseshoe bats revealed a much smaller spike gene with a different evolutionary lineage from the rest of the genomeVirology200736742843910.1016/j.virol.2007.06.009
  • FalconADetection of alpha and betacoronaviruses in multiple Iberian bat speciesArch. Virol.201115618831890318140910.1007/s00705-011-1057-1
  • KumarSStecherGTamuraKMEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasetsMol. Biol. Evol.2016331870187410.1093/molbev/msw054
  • MartinDPRDP3: a flexible and fast computer program for analyzing recombinationBioinformatics20102624622463294421010.1093/bioinformatics/btq467
  • LoleKSFull-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombinationJ. Virol.199973152160103818