Museum collections in ornithology: today's record of avian biodiversity for tomorrow's world

References

• Angst, D., Buffetaut, E., and Abourachid, A. (2011). The end of the fat Dodo? A new mass estimate for Raphus cucullatus. Naturwissenschaften 98, 233–236. doi:10.1007/s00114-010-0759-7
   Google Scholar
• Anonymous (1996). What's this grasswren? Wingspan 6(3), 25.
   Google Scholar
• Anonymous (2011). Preserve the past. Nature 470, 5–6. doi:10.1038/470005b
   Web of Science ®Google Scholar
• Austin, J., Smith, A. B., and Thomas, R. H. (1997). Palaeontology in a molecular world: the search for authentic ancient DNA. Trends in Ecology & Evolution 12, 303–306. doi:10.1016/S0169-5347(97)01102-6
   PubMed Web of Science ®Google Scholar
• Banks, R. C. (1979). Human related mortality of birds in the United States. Special Scientific Report—Wildlife No. 215, UnitedStatesDepartmentof the Interior Fish and Wildlife Service, Washington, DC.
   Google Scholar
• Barrett, M. T., Glogovac, J., Porter, P., Reid, B. J., and Rabinovitch, P. S. (1999). High yields of RNA and DNA suitable for array analysis from cell sorter purified epithelial cell and tissue populations. Nature Genetics 23, 32–33. doi:10.1038/14266
   PubMed Web of Science ®Google Scholar
• Bates, J. M., Bowie, R. C. K., Willard, D. E., Voelker, G., and Kahindo, C. (2004). A need for continued collecting of avian voucher specimens in Africa: why blood is not enough. Ostrich 75, 187–191. doi:10.2989/00306520409485442
   Web of Science ®Google Scholar
• Becker, B., and Beissinger, S. (2006). Centennial decline in the trophic level of an endangered seabird after fisheries decline. Conservation Biology 20, 470–479. doi:10.1111/j.1523-1739.2006.00379.x
   PubMed Web of Science ®Google Scholar
• Boakes, E. H., McGowan, P. J. K., Fuller, R. A., Chang-qing, D., Clark, N. E., O'Connor, K., and Mace, G. M. (2010). Distorted views of biodiversity: spatial and temporal bias in species occurrence data. PLoS Biology 8(6), e1000385. doi:10.1371/journal.pbio.1000385
   PubMed Web of Science ®Google Scholar
• Brennan, P. L. R., Prum, R. O., McCracken, K. G., Sorenson, M. D., Wilson, R. E., and Birkhead, T. R. (2007). Coevolution ofmale and female genital morphology in waterfowl. PLoS ONE 2(5), e418. doi:10.1371/journal.pone.0000418
   PubMed Web of Science ®Google Scholar
• Brennan, P., Clark, C., and Prum, R. (2010). Explosive eversion and functional morphology of the duck penis supports sexual conflict in waterfowl genitalia. Proceedings of the Royal Society of London. Series B. Biological Sciences 277, 1309–1314. doi:10.1098/rspb.2009.2139
   PubMed Web of Science ®Google Scholar
• Carling, M., Serene, L. G., and Lovette, I. J. (2011). Using historical DNA to characterize hybridization between Baltimore Orioles (Icterus galbula) and Bullock's Orioles (I. bullockii). Auk 128, 61–68. doi:10.1525/auk.2010.10164
   Web of Science ®Google Scholar
• Cheke, A. S. (2003). Treasure Island—the rise and decline of a small tropical museum, the Mauritius Institute. Bulletin of the British Ornithologists’ Club 123A, 197–206.
   Google Scholar
• Cherry, M. (2009). What can museum and herbarium collections tell us about climate change? South African Journal of Science 105, 87–88.
   Web of Science ®Google Scholar
• Christidis, L., and Boles, W. E. (2008). ‘Systematics and Taxonomy of Australian Birds.’ (CSIRO Publishing: Melbourne.)
   Google Scholar
• Collar, N., Fisher, C., and Feare, C. (Eds) (2003). Why museums matter: avian archives in an age of extinction. Bulletin of the British Ornithologists’ Club 123A, 1–360. Commonwealth of Australia (2009). Powering ideas: an innovation agenda for the 21st century. Commonwealth of Australia, Canberra. Available at http://www.innovation.gov.au/innovation/policy/pages/PoweringIdeas. aspx [Verified 10 July 2011].
   Google Scholar
• Craig, A. J. F. K., and Nuttall, R. J. (2010). The current status of ornithological collections in southern African museums. Journal of Afrotropical Zoology 6, 111–115.
   Google Scholar
• DEC (2007). Update # 2: Esperance bird deaths. Department of Environment and Conservation (WA). Available at http://portal.environment.wa.gov.au/pls/portal/docs/PAGE/DOE_ADMIN/MEDIA_REPOSITORY/TAB108326/TAB6428377/BIRD_UPDATE23032007.PDF [Verified 10 July 2011].
   Google Scholar
• Donnellan, S., Armstrong, J., Pickett, M., Milne, T., Baulderstone, J., Hollfelder, T., and Bertozzi, T. (2009). Systematic and conservation implications of mitochondrial DNA diversity in emu-wrens, Stipiturus (Aves: Maluridae). Emu 109, 143–152. doi:10.1071/MU07011
   Google Scholar
• Eaton, M. D., and Lanyon, S. M. (2003). The ubiquity of avian ultraviolet plumage reflectance. Proceedings of the Royal Society of London. Series B. Biological Sciences 270, 1721–1726. doi:10.1098/rspb.2003.2431
   PubMed Web of Science ®Google Scholar
• Escalante-Pliego, P., and Vuilleumier, F. (1989). ‘Directorio de Colecciones Ornitológicas en los Países de la América Neotropical.’ (American Museum of Natural History: New York.)
   Google Scholar
• Galeotti, P., Rubolini, D., Sacchi, R., and Fasola, M. (2009). Global changes and animal phenotypic responses: melanin-based plumage redness of Scops Owls increased with temperature and rainfall during the last century. Biology Letters 5, 532–534. doi:10.1098/rsbl.2009.0207
   PubMed Web of Science ®Google Scholar
• Gardner, J., Heinsohn, R., and Joseph, L. (2009). Shifting latitudinal clines in avian body size correlate with global warming in Australian passerines. Proceedings of the Royal Society of London. Series B. Biological Sciences 276, 3845–3852. doi:10.1098/rspb.2009.1011
   PubMed Web of Science ®Google Scholar
• Gilby, A. J., Pryke, S. R., and Griffith, S. C. (2009). The historical frequency of head-colour morphs in the Gouldian Finch (Erythrura gouldiae). Emu 109, 222–229. doi:10.1071/MU09013
   Google Scholar
• Gill, B. J. (2006). Birds in Australian and New Zealand museums—a major resource for ornithology. New Zealand Journal of Zoology 33, 299–315. doi:10.1080/03014223.2006.9518458
   Web of Science ®Google Scholar
• Green, R. E. (2008). Demographic mechanism of a historical bird population collapse reconstructed using museum specimens. Proceedings of the Royal Society of London. Series B. Biological Sciences 275, 2381–2387. doi:10.1098/rspb.2008.0473
   PubMed Web of Science ®Google Scholar
• Hedges, S. B., and Schweitzer, M. (1995). Detecting dinosaur DNA. Science 268, 1191–1192. doi:10.1126/science.7761839
   PubMed Web of Science ®Google Scholar
• Heenan, C. B., and Seymour, R. S. (2011). Structural support, not insulation, is the primary driver for avian cup-shaped nest design. Proceedings of the Royal Society of London. Series B. Biological Sciences. [Published online ahead ofprint 16 February 2011]. doi:10.1098/rspb.2010.2798
   Google Scholar
• Hogan, F., Cooke, R., Burridge, C., and Norman, J. (2008). Optimizing the use of shed feathers for genetic analysis. Molecular Ecology Resources 8, 561–567. doi:10.1111/j.1471-8286.2007.02044.x
   PubMed Web of Science ®Google Scholar
• IWGSC (2009). Scientific collections: mission-critical infrastructure for Federal science agencies. Interagency Working Group on Scientific Collections, National Science and Technology Council, Committee on Science, Washington, DC.
   Google Scholar
• Johnson, K., Reed, D., Parker, S. L. H., Kim, D., and Clayton, D. (2007). Phylogenetic analysis of nuclear and mitochondrial genes supports species groups for Columbicola (Insecta: Phthiraptera). Molecular Phyloge- netics and Evolution 45, 506–518. doi:10.1016/j.ympev.2007.07.005
   PubMed Web of Science ®Google Scholar
• Johnson, K., Clayton, D., Dumbacher, J., and Fleischer, R. (2010). The flight of the Passenger Pigeon: phylogenetics and biogeographic history of an extinct species. Molecular Phylogenetics and Evolution 57, 455–458. doi:10.1016/j.ympev.2010.05.010
   PubMed Web of Science ®Google Scholar
• Joseph, L., and Omland, K. (2009). Phylogeography: its development and impact in Australo-Papuan ornithology with special reference to para- phyly in Australian birds. Emu 109, 1–23. doi:10.1071/MU08024
   Web of Science ®Google Scholar
• Joseph, L., and Wilke, T. (2004). When DNA throws a spanner in the taxonomic works: testing for monophyly in the Dusky-capped Flycatcher Myiarchus tuberculifer and its South American subspecies M. t. atriceps Cabanis, 1883. Emu 104, 197–204. doi:10.1071/MU03047
   Google Scholar
• Joseph, L., and Wilke, T. (2006). Molecular resolution of population history, systematics and historical biogeography of the Australian ringneck parrots Barnardius: are we there yet? Emu 106,49–62. doi:10.1071/MU05035
   Google Scholar
• Kearns, A., Joseph, L., and Cook, L. (2010). The impact of Pleistocene climatic and landscape changes on Australian birds: a test using the Pied Butcherbird (Cracticus nigrogularis). Emu 110, 285–295. doi:10.1071/MU10020
   Google Scholar
• Lister, A. M. Climate Change Research Group (2011). Natural history collections as sources of long-term datasets. Trends in Ecology & Evolution 26, 153–154. doi:10.1016/j.tree.2010.12.009
   PubMed Web of Science ®Google Scholar
• Major, R. E., and Parsons, H. (2010). What do museum specimens tell us about the impact of urbanisation? A comparison of the recent and historical bird communities of Sydney. Emu 110, 92–103. doi: 10.1071/MU09058
   Google Scholar
• Marra, P. P., Hobson, K. A., and Holmes, R. T. (1998). Linking winter and summer events in a migratory bird by using stable-carbon isotopes. Science 282, 1884–1886.
   PubMed Web of Science ®Google Scholar
• Matthew, J. S. (1999). A new method for ageing some species of Melipha-gidae. Corella 23, 69–71.
   Google Scholar
• Mearns, B., and Mearns, R. (1998). ‘The Bird Collectors.’ (Academic Press: London.)
   Google Scholar
• Moksnes, A., and Roskaft, E. (1995). Egg-morphs and host preference in the Common Cuckoo (Cuculus canorus): an analysis of Cuckoo and host eggs from European museum collections. Journal of Zoology 236, 625–648. doi:10.1111/j.1469-7998.1995.tb02736.x
   Web of Science ®Google Scholar
• Murphy, S., Joseph, L., Burbidge, A., and Austin, J. (2011). A cryptic and critically endangered species revealed by mitochondrial DNA analyses—the Western Ground Parrot. Conservation Genetics 12, 595–600. doi:10.1007/s10592-010-0161-1
   Web of Science ®Google Scholar
• Olsen, P., Fuller, P., and Marples, T. (1993). Pesticide-related eggshell thinning in Australian raptors. Emu 93, 1–11. doi:10.1071/MU9930001
   Google Scholar
• Oskam, C., Haile, J., McLay, E., Rigby, P., Allentoft, M., Olsen, M., Bengtsson, C., Miller, G., Schwenninger, J.-L., Jacomb, C., Walter, R., Baynes, A., Dortch, J., Parker-Pearson, M., Thomas, M., Gilbert, P., Holdaway, R. N., Willerslev, E., and Bunce, M. (2010). Fossil avian eggshell preserves ancient DNA. Proceedings of the Royal Society of London. Series B. Biological Sciences 277, 1991–2000. doi:10.1098/rspb.2009.2019
   PubMed Web of Science ®Google Scholar
• Parkes, K. C. (1963). The contribution of museum collections to knowledge of the living bird. Living Bird 2, 121–130.
   Google Scholar
• Peterson, A. T., Moyle, R. G., Nyari, A., Robbins, M. B., Brumfield, R. T., and Remsen, J. V. (2007). The need for proper vouchering in phylogenetic studies of birds. Molecular Phylogenetics and Evolution 45, 1042–1044. doi:10.1016/j.ympev.2007.08.019
   PubMed Web of Science ®Google Scholar
• Remsen, J. V. (1995). The importance of continued collecting of bird specimens to ornithology and bird conservation. Bird Conservation International 5, 145–180. doi:10.1017/S095927090000099X
   Google Scholar
• Roselaar, C. S. (2003). An inventory of major European bird collections. Bulletin of the British Ornithologists’ Club 123A, 253–337.
   Google Scholar
• Russell, D. G. D., White, J., Maurer, G., and Cassey, P. (2010). Data-poor egg collections: cracking an important research resource. Journal of Afrotropical Zoology 6, 77–82.
   Google Scholar
• Scharlemann, J. P. (2001). Museum egg collections as stores of long-term phenological data. International Journal of Biometeorology 45, 208–211. doi: 10.1007/s004840100098
   PubMed Web of Science ®Google Scholar
• Shapiro, B., Sibthorpe, D., Rambaut, A., Austin, J., Wragg, G. M., Bininda-Emonds, O. R. P., Lee, P. L. M., and Cooper, A. (2002). Flight of the Dodo. Science 295, 1683. doi:10.1126/science.295.5560.1683
   PubMed Web of Science ®Google Scholar
• Shephard, J., Hughes, J., Catterall, C., and Olsen, P. (2005). Conservation status of the White-bellied Sea-Eagle Haliaeetus leucogaster in Australia determined using mtDNA control region sequence data. Conservation Genetics 6, 413–429. doi:10.1007/s10592-005-4987-x
   Web of Science ®Google Scholar
• Starling, M., Heinsohn, R., Cockburn, R., and Langmore, N. (2006). Cryptic gentes revealed in Pallid Cuckoos Cuculus pallidus using reflectance spectrophotometry. Proceedings of the Royal Society of London. Series B. Biological Sciences 273, 1929–1934. doi:10.1098/rspb.2006.3490
   PubMed Web of Science ®Google Scholar
• Stoeckle, M., and Winker, K. (2009). A global snapshot of avian tissue collections: state of the enterprise. Auk 126, 684–687. doi:10.1525/auk.2009.9709a
   Web of Science ®Google Scholar
• Suarez, A. V., and Tsutsui, N. D. (2004). The value of museum collections for research and society. Bioscience 54, 66–74. doi:10.1641/0006-3568(2004)054[0066:TVOMCF]2.0.CO;2
   Web of Science ®Google Scholar
• Toon, A., Mather, P. B., Baker, A. M., Durrant, K. L., and Hughes, J. M. (2007). Pleistocene refugia in an arid landscape: analysis of a widely distributed Australian passerine. Molecular Ecology 16, 2525–2541. doi:10.1111/j.1365-294X.2007.03289.x
   PubMed Web of Science ®Google Scholar
• Vo, A.-T., Bank, M. S., Shine, J. P., and Edwards, S. V. (2011). Temporal increase in organic mercury in an endangered pelagic seabird assessed by century-old museum specimens. Proceedings of the National Academy of Sciences of the United States of America 108, 7466–7471. doi:10.1073/pnas.1013865108
   PubMed Web of Science ®Google Scholar
• Willerslev, E., and Cooper, A. (2005). Ancient DNA. Proceedings of the Royal Society of London. Series B. Biological Sciences 272, 3–16. doi:10.1098/rspb.2004.2813
   PubMed Web of Science ®Google Scholar
• Winker, K. (1996). The crumbling infrastructure of biodiversity: the avian example. Conservation Biology 10, 703–707. doi:10.1046/j.1523-1739.1996.10030703.x
   Web of Science ®Google Scholar
• Winker, K. (2004). Natural history museums in a postbiodiversity era. Bioscience 54, 455–459. doi:10.1641/0006-3568(2004)054[0455:NHMIAP]2.0.CO;2
   Web of Science ®Google Scholar
• Winker, K. (2005). Bird collections: development and use of a scientific resource. Auk 122, 966–971. doi:10.1642/0004-8038(2005)122[0966:BCDAUO]2.0.CO;2
   Web of Science ®Google Scholar
• Wolf, J., Bayer, T., Haubold, B., Schilhabel, M., Rosenstiel, P., and Tautz, D. (2010). Nucleotide divergence vs. gene expression differentiation: comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the Hooded Crow. Molecular Ecology 19, 162–175. doi:10.1111/j.1365-294X.2009.04471.x
   PubMed Web of Science ®Google Scholar
• Woodward, S., Weyand, N., and Bunnell, M. (1994). DNA sequence from Cretaceous Period bone fragments. Science 266, 1229–1232. doi:10.1126/science.7973705
   PubMed Web of Science ®Google Scholar