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Articles

Completing the genetic puzzle of the reed warbler complex: insights from Italy

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Pages 440-447 | Received 12 Oct 2020, Accepted 22 Apr 2021, Published online: 14 Jun 2021

References

  • Amezian, M., Cortes, J., Thompson, I., Bensusan, K., Perez, C., Louah, A., Aziz El Agbani, M. & Qninba, A. 2010. Complete moult of an undescribed resident taxon of the Reed Warbler Acrocephalus scirpaceus/baeticatus complex in the Smir marshes, Northern Morocco. Ardea 98: 225–234.
  • Arbabi, T., Gonzalez, J., Witt, H.H., Klein, R. & Wink, M. 2014. Mitochondrial phylogeography of the Eurasian Reed Warbler Acrocephalus scirpaceus and the first genetic record of A. s. fuscus in Central Europe. Ibis 156: 799–811.
  • Babbington, J., Boland, C., Kirwan, G.M., Alsuhaibany, A., Shirihai, H. & Schweizer, M. 2019. Confirmation of Acrocephalus scirpaceus avicenniae (Aves: Acrocephalidae) from mangroves on the Red Sea coast near Jazan, southwest Saudi Arabia. Zool. Middle East 65: 201–207.
  • Bernini, G., Bellati, A., Pellegrino, I., Negri, A., Ghia, D., Fea, G., Sacchi, R., Nardi, P.A., Fasola, M. & Galeotti, P. 2016. Complexity of biogeographic pattern in the endangered crayfish Austropotamobius italicus in northern Italy: molecular insights of conservation concern. Cons. Genetics 17: 141–154.
  • Bilton, D.T., Mirol, P.M., Mascheretti, S., Fredga, K., Zima, J. & Searle, J.B. 1998. Mediterranean Europe as an area of endemism for small mammals rather than a source for northwards postglacial colonization. P. R. Soc. Lond. B. Biol. 265: 1219–1226.
  • Brambilla, M., Vitulano, S., Spina, F., Baccetti, N., Gargallo, G., Fabbri, E., Guidali, F. & Randi, E. 2008. A molecular phylogeny of the Sylvia cantillans complex: Cryptic species within the Mediterranean basin. Mol. Phylogenet. Evol. 48: 461–472.
  • Brito, P.H. 2007. Contrasting patterns of mitochondrial and microsatellite genetic structure among Western European populations of Tawny Owls (Strix aluco). Mol. Ecol. 16: 3423–3437.
  • Calvo, M., Templado, J., Oliverio, M. & Machordom, A. 2009. Hidden Mediterranean biodiversity: molecular evidence for a cryptic species complex within the reef building vermetid gastropod Dendropoma petraeum (Mollusca: Caenogastropoda). Biol. J. Linn. Soc. 96: 898–912.
  • Carranza, S., Romano, A., Arnold, E.N. & Sotgiu, G. 2008. Biogeography and evolution of European cave salamanders, Hydromantes (Urodela: Plethodontidae), inferred from mtDNA sequences. J. Biogeol. 35: 724–738.
  • Cosson, J.F., Hutterer, R., Libois, R., Sara, M., Taberlet, P. & Vogel, P. 2005. Phylogeographical footprints of the Strait of Gibraltar and Quaternary climatic fluctuations in the western Mediterranean: a case study with the Greater White-toothed Shrew, Crocidura russula (Mammalia: Soricidae). Mol. Ecol. 14: 1151–1162.
  • Cuttelod, A., García, N., Abdul Malak, D., Temple, H. & Katariya, V. 2008. The Mediterranean: a biodiversity hotspot under threat. In J.-C. Vié, C. Hilton-Taylor & S. N. Stuart. (ed) The 2008 Review of the IUCN red List of Threatened Species, 89–101. IUCN Gland.
  • Drovetski, S.V., Fadeev, I.V., Raković, M., Lopes, R.J., Boano, G., Pavia, M., Koblik, E.A., Lohman, Y.V., Red'kin, Y.A., Aghayan, S.A., Reis, S., Drovetskaya, S.S. & Voelker, G. 2018. A test of the European Pleistocene refugial paradigm, using a Western Palaearctic endemic bird species. P. R. Soc. B-Biol. Sci. 285: 0181606.
  • Förschler, M.I., Senar, J.C., Perret, P. & Björklund, M. 2009. The species status of the Corsican Finch Carduelis corsicana assessed by three genetic markers with different rates of evolution. Mol. Phylogenet. Evol. 52: 234–240.
  • Galimberti, A., Assandri, G., Maggioni, D., Ramazzotti, F., Baroni, D., Bazzi, G., Chiandetti, I., Corso, A., Ferri, V., Galuppi, M., Ilahiane, L., La Porta, G., Laddaga, L., Landi, F., Mastropasqua, F., Ramellini, S., Santinelli, R., Soldato, G., Surdo, S. & Casiraghi, M. 2021. Italian odonates in the Pandora's box: A comprehensive DNA barcoding inventory shows taxonomic warnings at the Holarctic scale. Mol. Ecol. Resour. 21: 183–200.
  • Ghielmi, S., Menegon, M., Marsden, S.J., Laddaga, L. & Ursenbacher, S. 2016. A new vertebrate for Europe: the discovery of a range-restricted relict viper in the western Italian Alps. J. Zool. Syst. Evol. Res. 54: 161–173.
  • Giglio-Tos, E. 1918. In A. Musso. (ed) Gli uccelli d’Italia. Manuale pratico per la determinazione delle specie italiane di uccelli con nozioni per la preparazione delle pelli. Torino, Italy.
  • Gill, F., Donsker, D. & Rasmussen, P. 2020. IOC World Bird List (v10.2). doi:10.14344/IOC.ML.10.2.
  • Habel, J.C., Dieker, P. & Schmitt, T. 2009. Biogeographical connections between the Maghreb and the Mediterranean peninsulas of southern Europe. Biol. J. Linn. Soc. 98: 693–703.
  • Hall, A. 1999. Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acid. S 41: 95–98.
  • Helbig, A.J., Seibold, I., Martens, J. & Wink, M. 1995. Genetic differentiation and phylogenetic relationships of Bonelli's Warbler Phylloscopus bonelli and Green Warbler P. nitidus. J. Avian Biol. 26: 139–153.
  • Hering, J., Winkler, H. & Steinheimer, F.D. 2016. A new subspecies of Eurasian Reed Warbler Acrocephalus scirpaceus in Egypt. Bull. B O C 136: 101–128.
  • Hourlay, F., Libois, R., D’Amico, F., Sarà, M., O’Halloran, J. & Michaux, J.R. 2008. Evidence of a highly complex phylogeographic structure on a specialist river bird species, the Dipper (Cinclus cinclus). Mol. Phylogenet. Evol. 49: 435–444.
  • Hulva, P., Horáček, I., Strelkov, P.P. & Benda, P. 2004. Molecular architecture of Pipistrellus pipistrellus/Pipistrellus pygmaeus complex (Chiroptera: Vespertilionidae): further cryptic species and Mediterranean origin of the divergence. Mol. Phylogenet. Evol. 32: 1023–1035.
  • Katoh, K. & Standley, D.M. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol. Biol. Evol. 30: 772–780.
  • Keller, V., Herrando, S., Voříšek, P., Franch, M., Kipson, M., Milanesi, P., Martí, D., Anton, M., Klvaňová, A., Kalyakin, M.V., Bauer, H.-G. & Foppen, R.P.B. 2020. European Breeding Bird Atlas 2: Distribution, abundance and change. European Bird Census Council & Lynx Edicions, Barcelona.
  • Kindler, C. & Fritz, U. 2018. Phylogeography and taxonomy of the Barred Grass Snake (Natrix helvetica), with a discussion of the subspecies category in zoology. Vertebr. Zool. 68: 253–267.
  • Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. 2018. MEGA x: molecular evolutionary genetics analysis across computing platforms. Mol. Biol. Evol. 35: 1547–1549.
  • Leigh, J.W. & Bryant, D. 2015. POPART: full-feature software for haplotype network construction. Methods Ecol. Evol. 6: 1110–1116.
  • Lohman, D.J., Ingram, K.K., Prawiradilaga, D.M., Winker, K., Sheldon, F.H., Moyle, R.G., Ng, P.K.L., Ong, P.S., Wang, L.K., Braile, T.M. & Astuti, D. 2010. Cryptic genetic diversity in “widespread” Southeast Asian bird species suggests that Philippine avian endemism is gravely underestimated. Biol. Cons. 143: 1885–1890.
  • Mattoccia, M., Romano, A. & Sbordoni, V. 2005. Mitochondrial DNA sequence analysis of the spectacled salamander, Salamandrina terdigitata (Urodela: Salamandridae), supports the existence of two distinct species. Zootaxa 995: 1–19.
  • Myers, N., Mittermeier, R.A., Mittermeier, C.G., Da Fonseca, G.A. & Kent, J. 2000. Biodiversity hotspots for conservation priorities. Nature 403: 853–858.
  • Neto, J.M., Arroyo, J.L., Bargain, B., Monros, J.S., Matrai, N., Prochazka, P. & Zehtindjiev, P. 2012. Phylogeography of a habitat specialist with high dispersal capability: the Savi’s Warbler Locustella luscinioides. PLoS One 7: e38497.
  • Nieto, I., Chamorro, D., Palomo, L.J., Real, R. & Muñoz, A.-R. 2018. Is the Eurasian Reed Warbler Acrocephalus scirpaceus a regular wintering species in the Iberian Peninsula? Ringing data say yes. Acta Ornithol. 53: 61–68.
  • Nissardi, S. 1998. Caso di svernamento di cannaiola, Acrocephalus scirpaceus, nello stagno di Molentargius (Sardegna meridionale). Riv. Ital. Ornitol. 68: 221–222.
  • Nissardi, S. & Zucca, C. 2001. Complete post-breeding moult in Reed Warbler Acrocephalus scirpaceus in southern Sardinia. Ringing Migr. 20: 381–382.
  • Olsson, U., Rguibi-Idrissi, H., Copete, J.L., Matos, J.L.A., Provost, P., Amezian, M., Alström, P. & Jiguet, F. 2016. Mitochondrial phylogeny of the Eurasian/African reed warbler complex (Acrocephalus, Aves). disagreement between morphological and molecular evidence and cryptic divergence: A case for resurrecting Calamoherpe ambigua Brehm 1857. Mol. Phylogenet. Evol 102: 30–44.
  • Pavia, M., Galimberti, A., Pellegrino, I., Silvano, F., Zuccon, D. & Boano, G. 2018. New insights into the morphology and taxonomy of the Acrocephalus baeticatus / scirpaceus species complex based on a newly found West African syntopic population. Vie Milieu 68: 25–31.
  • Pellegrino, I., Boatti, L., Cucco, M., Mignone, F., Kristensen, T.N., Mucci, N., Randi, E., Ruiz-Gonzalez, A. & Pertoldi, C. 2016. Development of SNP markers for population structure and phylogeography characterization in Little Owl (Athene noctua) using a genotyping-by-sequencing approach. Consev. Genet. Resour. 8: 13–16.
  • Pellegrino, I., Cucco, M., Harvey, J.A., Liberatore, F., Pavia, M., Voelker, G. & Boano, G. 2017. So similar and yet so different: taxonomic status of Pallid Swift Apus pallidus and Common Swift Apus apus. Bird Study 64: 344–352.
  • Pellegrino, I., Ilahiane, L., Boano, G., Cucco, M., Pavia, M., Prestridge, H.L. & Voelker, G. 2021. Avian haemosporidian diversity on Sardinia: a first general assessment for the insular Mediterranean. Diversity. (Basel) 13: 75.
  • Pellegrino, I., Negri, A., Boano, G., Cucco, M., Kristensen, T.N., Pertoldi, C., Randi, E., Šálek, M. & Mucci, N. 2015. Evidence for strong genetic structure in European populations of the little owl Athene noctua. J. Avian Biol. 46: 462–475.
  • Pertoldi, C., Pellegrino, I., Cucco, M., Mucci, N., Randi, E., Laursen, J.T., Sunde, P., Loeschcke, V. & Kristensen, T.N. 2012. Genetic consequences of population decline in the Danish population of the Little Owl (Athene noctua). Evol. Ecol Res. 14: 921–932.
  • Pons, J.M., Cibois, A., Fournier, J., Fuchs, J., Olioso, G. & Thibault, J.C. 2019. Gene flow and genetic divergence among mainland and insular populations across the south-western range of the Eurasian treecreeper (Certhia familiaris, Aves). Biol. J. Linn. Soc. 126: 447–461.
  • Pons, J.M., Thibault, J.C., Aymí, R., Grussu, M., Muntaner, J., Olioso, G., Sunyer, J.R., Touihri, M. & Fuchs, J. 2016. The role of western Mediterranean islands in the evolutionary diversification of the spotted flycatcher Muscicapa striata, a long-distance migratory passerine species. J. Avian Biol. 47: 386–398.
  • Procházka, P., Stokke, B.G., Jensen, H., Fainová, D., Bellinvia, E., Fossøy, F., Vikan, J.R., Bryja, J. & Soler, M. 2011. Low genetic differentiation among reed warbler Acrocephalus scirpaceus populations across Europe. J. Avian Biol. 42: 103–113.
  • Raković, M., Neto, J.M., Lopes, R.J., Koblik, E.A., Fadeev, I.V., Lohman, Y.V., Aghayan, S.A., Boano, G., Pavia, M., Perlman, Y., Kiat, Y., Dov, A.B., Martin Collison, J., Voelker, G. & Drovetski, S. 2019. Geographic patterns of mtDNA and Z-linked sequence variation in the common chiffchaff and the ‘chiffchaff complex’. PLoS One 14: e0210268.
  • Scalercio, S., Cini, A., Menchetti, M., Vodă, R., Bonelli, S., Bordoni, A., Casacci, L.P., Dincă, V., Balletto, E., Vila, R. & Dapporto, L. 2020. How long is 3 km for a butterfly? Ecological constraints and functional traits explain high mitochondrial genetic diversity between Sicily and the Italian Peninsula. J. Anim. Ecol. 89: 2013–2026.
  • Stewart, J.R., Lister, A.M., Barnes, I. & Dalén, L. 2010. Refugia revisited: individualistic responses of species in space and time. P. R. Soc. B-Biol. Sci. 277: 661–671.
  • Stöck, M., Sicilia, A., Belfiore, N.M., Buckley, D., Brutto, S.L., Valvo, M.L. & Arculeo, M. 2008. Post-Messinian evolutionary relationships across the Sicilian channel: mitochondrial and nuclear markers link a new green toad from Sicily to African relatives. BMC Evol. Biol. 8: 56–74.
  • Svensson, L. 1992. Identification Guide to European Passerines. 4th rev. British Trust for Ornithology, Stockholm.
  • Villesen, P. 2007. Fabox: an online toolbox for fasta sequences. Mol. Ecol. Notes 7: 965–968.
  • Voelker, G. & Light, J.E. 2011. Palaeoclimatic events, dispersal and migratory losses along the Afro-European axis as drivers of biogeographic distribution in Sylvia warblers. BMC Evol. Biol. 11: 163.
  • Wauters, L.A., Amori, G., Aloise, G., Gippoliti, S., Agnelli, P., Galimberti, A., Casiraghi, M., Preatoni, D. & Martinoli, A. 2017. New endemic mammal species for Europe: Sciurus meridionalis (Rodentia, Sciuridae). Hystrix  28: 1–8.
  • Zuccon, D., Pons, J.M., Boano, G., Chiozzi, G., Gamauf, A., Mengoni, C., Nespoli, D., Olioso, G., Pavia, M., Pellegrino, I., Raković, M., Randi, E., Idrissi, H.R., Touihri, M., Unsöld, M., Vitulano, S. & Brambilla, M. 2020. Type specimens matter: new insights on the systematics, taxonomy and nomenclature of the subalpine warbler (Sylvia cantillans) complex. Zool. J. Linn. Soc-Lond 190: 314–341.

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