AFLP fingerprinting for paternity testing in ducks

References

• Ajmone-Marsan , P , Valentini , A , Cassandro , M , Vecchiotti-Antaldi , G , Bertoni , G and Kuiper , M . 1997 . AFLP™ markers for DNA fingerprinting in cattle . Animal Genetic , 28 : 418 – 426 .
   PubMed Web of Science ®Google Scholar
• Ajmone-Marsan , P , Negrini , R , Crepaldi , P , Milanesi , E , Gorni , C , Valentini , A and Cicogna , M . 2001 . Assessing genetic diversity in Italian goat populations using AFLP markers . Animal Genetics , 32 : 281 – 288 .
   PubMed Web of Science ®Google Scholar
• Bensch , S and Akesson , M . 2005 . Ten years of AFLP in ecology and evolution: why so few animals? . Molecular Ecology , 14 : 2899 – 2914 .
   PubMed Web of Science ®Google Scholar
• Bonne , AC , Den Bieman , MG , Gillissen , GF , Kren , V , Krenova , D , Bila , V , Zidek , V , Kostka , V , Musilova , A , Pravenec , M , Van Zutphen , BF and Van Lith , HA . 2003 . Genetic map of AFLP markers in the rat (Rattus norvegicus) derived from the H × B/Ipcv and B × H/Cub sets of recombinant inbred strains . Biochemical Genetics , 41 : 77 – 89 .
   PubMed Web of Science ®Google Scholar
• Cameron , ND , Van Eijk , MJ , Brugmans , B and Peleman , J . 2003 . Discrimination between selected lines of pigs using AFLP markers . Heredity , 91 : 494 – 501 .
   PubMed Web of Science ®Google Scholar
• Cervera , MT , Storme , V , Soto , A , Ivens , B , Van Montagu , M , Rajora , OP and Boerjan , W . 2005 . Intraspecific and interspecific genetic and phylogenetic relationships in the genus Populus based on AFLP markers . Theoretical and Applied Genetics , 111 : 1440 – 1456 .
   PubMed Web of Science ®Google Scholar
• Griffiths , R and Orr , K . 1999 . The use of amplified fragment length polymorphism (AFLP) in the isolation of sex-specific markers . Molecular. Ecology , 8 : 671 – 674 .
   PubMed Web of Science ®Google Scholar
• Herbergs , J , Siwek , M , Crooijmans , RPMA , Van Der Poel , JJ and Groenen , MAM . 1999 . Multicolour fluorescent detection and mapping of AFLP markers in chicken (Gallus domesticus) . Animal Genetics , 30 : 274 – 285 .
   PubMed Web of Science ®Google Scholar
• Horng , YM and Huang , MC . 2003 . Male-specific DNA sequences in pigs . Theriogenology , 59 : 841 – 848 .
   PubMed Web of Science ®Google Scholar
• Horng , YM , Wu , CP , Wang , YC and Huang , MC . 2006 . A novel molecular genetic marker for gender determination of pigeons . Theriogenology , 65 : 1759 – 1768 .
   PubMed Web of Science ®Google Scholar
• Huang , MC , Lin , WC , Horng , YM , Rouvier , R and Huang , CW . 2003 . Female-specific DNA sequences in geese . British Poultry Science , 44 : 359 – 364 .
   PubMed Web of Science ®Google Scholar
• Janssen , P , Coopman , R , Huys , G , Swings , J , Bleeker , M , Vos , P , Zabeau , M and Kersters , K . 1996 . Evaluation of the DNA fingerprint method AFLP as a new tool in bacterial taxonomy . Microbiology , 142 : 1881 – 1893 .
   PubMed Web of Science ®Google Scholar
• Jones , SW , Dobson , ME , Francesconi , SC , Schoske , R and Crawford , R . 2005 . DNA assays for detection, identification, and individualization of select agent microorganisms . Croatian Medical Journal , 46 : 522 – 529 .
   PubMed Web of Science ®Google Scholar
• Kikuchi , S , Fujima , D , Sasazaki , S , Tsuji , S , Mizutani , M , Fujiwara , A and Mannen , H . 2005 . Construction of a genetic linkage map of Japanese quail (Coturnix japonica) based on AFLP and microsatellite markers . Animal Genetics , 36 : 227 – 231 .
   PubMed Web of Science ®Google Scholar
• Knorr , C , Cheng , HH and Dodgson , JB . 1999 . Application of AFLP markers to genome mapping in poultry . Animal Genetics , 30 : 28 – 35 .
   PubMed Web of Science ®Google Scholar
• Laval , G , Iannuccelli , N , Legault , C , Milan , D , Groenen , MA , Giuffra , E , Andersson , L , Nissen , PH , Jorgensen , CB , Beeckmann , P , Geldermann , H , Foulley , JL , Chevalet , C and Ollivier , L . 2000 . Genetic diversity of eleven European pig breeds . Genetics Selection Evolution , 32 : 187 – 203 .
   PubMed Web of Science ®Google Scholar
• Laval , G , Sancristobal , M and Chevalet , C . 2002 . Measuring genetic distances between breeds: use of some distances in various short term evolution models . Genetics Selection Evolution , 34 : 481 – 507 .
   PubMed Web of Science ®Google Scholar
• Lazzaro , BP , Sceurman , BK , Carney , SL and Clark , AG . 2002 . fRFLP and fAFLP: medium-throughput genotyping by fluorescently post-labeling restriction digestion . Biotechniques , 33 : 539 – 546 .
   PubMed Web of Science ®Google Scholar
• Lucchini , V . 2003 . AFLP: a useful tool for biodiversity conservation and management . Comptes Rendus Biologies , 1 : S43 – 48 .
   Web of Science ®Google Scholar
• Masiga , DK and Turner , CM . 2004 . Amplified (restriction) fragment length polymorphism (AFLP) analysis . Methods in Molecular Biology , 270 : 173 – 186 .
   PubMedGoogle Scholar
• Mba , C and Tohme , J . 2005 . Use of AFLP markers in surveys of plant diversity . Methods in Enzymology , 395 : 177 – 201 .
   PubMed Web of Science ®Google Scholar
• Minvielle , F , Coville , JL , Krupa , A , Monvoisin , JL , Maeda , Y and Okamoto , S . 2000 . Genetic similarity and relationships of DNA fingerprints with performance and with heterosis in Japanese quail lines from two origins and under reciprocal recurrent or within-line selection for early egg production . Genetics Selection Evolution , 32 : 289 – 302 .
   PubMed Web of Science ®Google Scholar
• Mueller , UG and Wolfenbarger , LL . 1999 . AFLP genotyping and fingerprinting . Trends in Ecology and Evolution , 14 : 389 – 394 .
   PubMed Web of Science ®Google Scholar
• Myburg , AA , Remington , DL , O'Malley , DM , Sederoff , RR and Whetten , RW . 2001 . High-throughput AFLP analysis using infrared dye-labeled primers and an automated DNA sequencer . Biotechniques , 30 : 348 – 357 .
   PubMed Web of Science ®Google Scholar
• Ovilo , C , Cervera , MT , Castellanos , C and Martinez-Zapater , JM . 2000 . Characterization of Iberian pig genotypes using AFLP markers . Animal Genetics , 31 : 117 – 122 .
   PubMed Web of Science ®Google Scholar
• Papa , R , Troggio , M , Ajmone-Marsan , P and Nonnis Marzano , F . 2005 . An improved protocol for the production of AFLP markers in complex genomes by means of capillary electrophoresis . Journal of Animal Breeding and Genetics , 122 : 62 – 68 .
   PubMed Web of Science ®Google Scholar
• Roussot , O , Feve , K , Plisson-Petit , F , Pitel , F , Faure , JM , Beaumont , C and Vignal , A . 2003 . AFLP linkage map of the Japanese quail Coturnix japonica . Genetics Selection Evolution , 35 : 559 – 572 .
   PubMed Web of Science ®Google Scholar
• Schmidt , H , Taniwaki , MH , Vogel , RF and Niessen , L . 2004 . Utilization of AFLP markers for PCR-based identification of Aspergillus carbonarius and indication of its presence in green coffee samples . Journal of Applied Microbiology , 97 : 899 – 909 .
   PubMed Web of Science ®Google Scholar
• Tsuji , S , Itoh , K , Sasazaki , S , Mannen , H , Oyama , K , Shojo , M and Mukai , F . 2004 . An association study using AFLP markers and application to a beef cattle breeding population . Animal Genetics , 35 : 40 – 43 .
   PubMed Web of Science ®Google Scholar
• Van Den Braak , N , Simons , G , Gorkink , R , Reijans , M , Eadie , K , Kremers , K , Van Soolingen , D , Savelkoul , P , Verbrugh , H and Van Belkum , A . 2004 . A new high-throughput AFLP approach for identification of new genetic polymorphism in the genome of the clonal microorganism Mycobacterium tuberculosis . Journal of Microbiological Methods , 56 : 49 – 62 .
   PubMed Web of Science ®Google Scholar
• Van Haeringen , WA , Den Bieman , MG , Lankhorst , AE , Van Lith , HA and Van Zutphen , LF . 2002 . Application of AFLP markers for QTL mapping in the rabbit . Genome , 45 : 914 – 921 .
   PubMed Web of Science ®Google Scholar
• Vignal , A , Milan , D , SanCristobal , M and Eggen , A . 2002 . A review on SNP and other types of molecular markers and their use in animal genetics . Genetics Selection Evolution , 34 : 275 – 305 .
   PubMed Web of Science ®Google Scholar
• Vos , P , Hogers , R , Bleeker , M , Reijans , M , Van De Lee , T , Hornes , M , Frijters , A , Pot , J , Peleman , J , Kuiper , M and Zabeau , M . 1995 . AFLP: a new technique for DNA fingerprinting . Nucleic Acids Research , 23 : 4407 – 4414 .
   PubMed Web of Science ®Google Scholar
• Watanabe , T , Yoshida , M , Nakajima , M and Taniguchi , N . 2005 . Linkage mapping of AFLP and microsatellite DNA markers with the body color- and sex-determining loci in the guppy (Poecilia reticulata) . Zoological Science , 22 : 883 – 889 .
   PubMed Web of Science ®Google Scholar
• Wimmers , K , Murani , E , Ponsuksili , S , Yerle , M and Schellander , K . 2002 . Detection of quantitative trait loci for carcass traits in the pig by using AFLP . Mammalian Genome , 13 : 206 – 210 .
   PubMed Web of Science ®Google Scholar
• Wong , HL , Yeoh , HH and Lim , SH . 1999 . Customisation of AFLP analysis for cassava varietal identification . Phytochemistry , 50 : 919 – 924 .
   PubMed Web of Science ®Google Scholar
• Wong , KY , Chuan , YC , Aggarwal , A , Tham , L , Kong , WM and Tan , P . 2004 . Identifying patterns of DNA for tumor diagnosis using capillary electrophoresis-amplified fragment length polymorphism (CE-AFLP) screening . Journal of Bioinformatics and Computational Biology , 2 : 569 – 587 .
   PubMedGoogle Scholar