226
Views
0
CrossRef citations to date
0
Altmetric
Genetics & Genomics

Two novel InDels within the promoter of SIRT1 are associated with growth traits in chickens

, , , , , , , , , , & show all
Pages 445-453 | Received 10 May 2021, Accepted 23 Sep 2021, Published online: 19 Jan 2022

References

  • Bellet, M. M., S. Masri, G. Astarita, P. Sassone-Corsi, M. A. Della Fazia, and G. Servillo. 2016. “Histone Deacetylase SIRT1 Controls Proliferation, Circadian Rhythm, and Lipid Metabolism during Liver Regeneration in Mice.” Journal of Biological Chemistry 291 (44): 23318–23329. doi:10.1074/jbc.M116.737114.
  • Chakrabarti, P., T. English, S. Karki, L. Qiang, R. Tao, J. Kim, Z. Luo, et al. 2011. “SIRT1 Controls Lipolysis in Adipocytes via FOXO1-mediated Expression of ATGL.” Journal of Lipid Research 52 (9): 1693–1701. doi:10.1194/jlr.M014647.
  • Chosokabe, M., A. Noguchi, M. Hoshikawa, M. Masuzawa, and M. Takagi. 2019. “SIRT1 Expression Is Associated with Cell Proliferation in Angiosarcoma.” Anticancer Research 39 (3): 1143–1150. doi:10.21873/anticanres.13223.
  • Fulco, M., R. L. Schiltz, S. Iezzi, M. T. King, P. Zhao, Y. Kashiwaya, E. Hoffman, et al. 2003. “Sir2 Regulates Skeletal Muscle Differentiation as a Potential Sensor of the Redox State.” Molecular Cell 12 (1): 51–62. doi:10.1016/S1097-2765(03)00226-0.
  • Gallardo-Montejano, V. I., G. Saxena, C. M. Kusminski, C. Yang, J. L. Mcafee, L. Hahner, K. Hoch, et al. 2016. “Nuclear Perilipin 5 Integrates Lipid Droplet Lipolysis with PGC-1α/SIRT1-dependent Transcriptional Regulation of Mitochondrial Function.” Nature Communications 7 (1): 12723. doi:10.1038/ncomms12723.
  • Greiss, S., and A. Gartner. 2009. “Sirtuin/Sir2 Phylogeny, Evolutionary Considerations and Structural Conservation.” Molecules and Cells 28 (5): 407–415. doi:10.1007/s10059-009-0169-x.
  • Han, R. L., Y. Wei, X. T. Kang, H. Chen, G. R. Sun, G. X. Li, Y. C. Bai, et al. 2012. “Novel SNPs in the PRDM16 Gene and Their Associations with Performance Traits in Chickens.” Molecular Biology Reports 39 (3): 3153–3160. doi:10.1007/s11033-011-1081-y.
  • Han, R. L., Z. J. Li, M. J. Li, J. Q. Li, X. Y. Lan, G. R. Sun, X. T. Kang, and H. Chen. 2011. “Novel 9-bp Indel in Visfatin Gene and Its Associations with Chicken Growth.” British Poultry Science 52 (1): 52–57. doi:10.1080/00071668.2010.537310.
  • Havis, E., and D. Duprez. 2020. “EGR1 Transcription Factor Is a Multifaceted Regulator of Matrix Production in Tendons and Other Connective Tissues.” International Journal of Molecular Sciences 21 (5): 1664. doi:10.3390/ijms21051664.
  • Hernelahti, M., H. O. Tikkanen, J. Karjalainen, and U. M. Kujala. 2005. “Muscle Fiber-type Distribution as a Predictor of Blood Pressure: A 19-year Follow-up Study.” Hypertension 45 (5): 1019–1023. doi:10.1161/01.HYP.0000165023.09921.34.
  • Hou, X., S. Xu, K. A. Maitland-Toolan, K. Sato, B. Jiang, Y. Ido, F. Lan, et al. 2008. “SIRT1 Regulates Hepatocyte Lipid Metabolism through Activating AMP-activated Protein Kinase.” The Journal of Biological Chemistry 283 (29): 20015–20026. doi:10.1074/jbc.M802187200.
  • Kemper, J. K., S. E. Choi, and D. H. Kim. 2013. “Sirtuin 1 Deacetylase: A Key Regulator of Hepatic Lipid Metabolism.” Vitamins & Hormones 91: 385–404. doi:10.1016/B978-0-12-407766-9.00016-X.
  • Li, H., G. Sun, Y. Tian, R. Han, G. Li., and X. Kang. 2013. “MicroRNAs-1614-3p Gene Seed Region Polymorphisms and Association Analysis with Chicken Production Traits.” Journal of Applied Genetics 54 (2): 209–213. doi:10.1007/s13353-013-0142-4.
  • Li, X., S. Zhang, G. Blander, T. G. Jeanette, K. Monty, and G. Leonard. 2007. “SIRT1 Deacetylates and Positively Regulates the Nuclear Receptor LXR.” Molecular Cell 28 (1): 91–106. doi:10.1074/jbc.M110.122978.
  • Li, Z. J., X. Y. Lan, J. J. Sun, J. Wang, Y. Z. Huang, W. J. Guo, B. Zhang, et al. 2012. “Molecular Characterization and Haplotype Combination of PrRP Gene Polymorphism and Its Association with Production Traits in Chinese Native Goats.” Small Ruminant Research 105 (1–3): 69–78. doi:10.1016/j.smallrumres.2012.01.004.
  • Liang, F., S. Kume, and D. Koya. 2009. “SIRT1 and Insulin Resistance.” Nature Reviews Endocrinology 5 (7): 367–373. doi:10.1016/j.jdiacomp.2015.08.022.
  • Livak K. J., and T. D. Schmittgen. 2001. “Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.” Methods 25 (4): 402–408.
  • Melhem, H., F. Hansmannel, A. Bressenot, S. F. Battaglia-Hsu, V. Billioud, J. M. Alberto, J. L. Guneant, et al. 2015. “Methyl-deficient Diet Promotes Colitis and SIRT1-mediated Endoplasmic Reticulum Stress.” Gut 65 (4): 595–606. doi:10.1136/gutjnl-2014-307030.
  • Nei, M., and A. K. Roychoudhury. 1974. “Sampling Variances of Heterozygosity and Genetic Distance.” Genetics 76 (2): 379–390. doi:10.1093/genetics/76.2.379.
  • Pfluger, P. T., D. Herranz, S. Velasco-Miguel, M. Serrano, and M. H. Tschop. 2008. “Sirt1 Protects against High-fat Diet-induced Metabolic Damage.” Proceedings of the National Academy of Sciences 105 (28): 9793–9798. doi:10.1073/pnas.0802917105.
  • Picard, F., and L. Guarente. 2005. “Molecular Links between Aging and Adipose Tissue.” International Journal of Obesity 29 (Suppl 1): S36–9. doi:10.1038/sj.ijo.0802912.
  • Picard, F., M. Kurtev, N. Chung, A. Topark-Ngarm, T. Senawong, R. Machado De Oliveira, M. Leid, et al. 2004. “Sirt1 Promotes Fat Mobilization in White Adipocytes by Repressing PPAR-gamma.” Nature 429 (6993): 771–776. doi:10.1038/nature02583.
  • Ponugoti, B., D. H. Kim, Z. Xiao, Z. Smith, J. Miao, M. Zang, S. Y. Wu, et al. 2010. “SIRT1 Deacetylates and Inhibits SREBP-1C Activity in Regulation of Hepatic Lipid Metabolism.” The Journal of Biological Chemistry 285 (44): 33959–33970. doi:10.1074/jbc.M110.122978.
  • Qiang, L., H. V. Lin, J. Y. Kim-Muller, C. L. Welch, W. Gu, and D. Accili. 2011. “Proatherogenic Abnormalities of Lipid Metabolism in SirT1 Transgenic Mice are Mediated through Creb Deacetylation.” Cell Metabolism 14 (6): 758–767. doi:10.1016/j.cmet.2011.10.007.
  • Rekiel, A., J. Więcek, M. Batorska, and J. Kulisiewicz. 2015. “Effect of Piglet Birth Weight on Carcass Muscle and Fat Content and Pork Quality - A Review.” Annals of Animal Science 15 (2): 271–287. doi:10.2478/aoas-2014-0088.
  • Ren, J., N. Xu, Z. Ma, Y. Li, C. Li, Y. Wang, Y. Tian, et al. 2018. “Characteristics of Expression and Regulation of Sirtuins in Chicken (Gallus Gallus).” Genome 60 (5): 431–440. doi:10.1139/gen-2016-0125.
  • Revollo, J. R., and X. Li. 2013. “The Ways and Means that Fine Tune Sirt1 Activity.” Trends in Biochemical Sciences 38 (3): 160–167. doi:10.1016/j.tibs.2012.12.004.
  • Rodgers, J. T., and P. Puigserver. 2007. “Fasting-dependent Glucose and Lipid Metabolic Response through Hepatic Sirtuin 1.” Proceedings of the National Academy of Sciences of the United States of America 104 (31): 12861–12866. doi:10.1073/pnas.0702509104.
  • Simmons, G. E., Jr, W. M. Pruitt, and K. Pruitt. 2015. “Diverse Roles of SIRT1 in Cancer Biology and Lipid Metabolism.” International Journal of Molecular Sciences 16 (1): 950–965. doi:10.3390/ijms16010950.
  • Simoneau, J. A., and C. Bouchard. 1995. “Genetic Determinism of Fiber Type Proportion in Human Skeletal Muscle.” Faseb Journal Official Publication of the Federation of American Societies for Experimental Biology 9 (11): 1091–1095. doi:10.1006/excr.1995.1283.
  • Staun, H. 1972. “The Nutritional and Genetic Influence on Number and Size of Muscle Fibres and Their Response to Carcass Quality in Pigs.” World Review of Animal Production 18-26.
  • Vinciguerra, M., M. Fulco, A. Ladurner, V. Sartorelli, and N. Rosenthal. 2010. “SirT1 in Muscle Physiology and Disease: Lessons from Mouse Models.” Disease Models & Mechanisms 3 (5–6): 298–303. doi:10.1242/dmm.004655.
  • Wang, Y., J. Viscarra, S. J. Kim, and H. S. Sul. 2015. “Transcriptional Regulation of Hepatic Lipogenesis.” Nature Reviews Molecular Cell Biology 16 (11): 678–689. doi:10.1038/nrm4074.
  • Wu, F., and A. G. Yeh. 1999. “Urban Spatial Structure in a Transitional Economy.” Journal of the American Planning Association 65 (4): 377–394. doi:10.1080/01944369908976069.
  • Xu, F., Z. Gao, J. Zhang, C. A. Rivera, J. Yin, J. Weng, and J. Ye. 2010. “Lack of SIRT1 (Mammalian Sirtuin 1) Activity Leads to Liver Steatosis in the SIRT1± Mice: A Role of Lipid Mobilization and Inflammation.” Endocrinology 151 (6): 2504–2514. doi:10.1210/en.2009-1013.
  • Yang, Q. B., Y. L. He, X. W. Zhong, W. G. Xie, and J. G. Zhou. 2019. “Resveratrol Ameliorates Gouty Inflammation via Upregulation of Sirtuin 1 to Promote Autophagy in Gout Patients.” Inflammopharmacology 27 (1): 47–56. doi:10.1007/s10787-018-00555-4.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.