Phylogenetic relationships of millipedes in the subclass Penicillata (Diplopoda) with a key to the genera

References

• Attems C. 1907. Javanische Myriopoden, gesammelt von direktor K. Kraepelin im jahre 1903. Mitt Naturhist Mus Hamburg. 24:77–142.
   Google Scholar
• Brölemann HW. 1917. Macroxenus, nouveau genre de Myriapodes Psélaphognathes. Bull Soc Hist Nat Afr Noire. 8(6):114-118.
   Google Scholar
• Brölemann HW. 1931. Myriapodes recueillis en Nouvelle-Calédonie et aux Loyality. Arch Zool Exp Gen. 72(2):275–316.
   Google Scholar
• Castresana J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol. 17(4):540–552.
   Web of Science ®Google Scholar
• Chamberlin RV. 1940. On a diplopod collection from Barro Colorado Island. Panama. Bull Univ Utah Biol Ser. 5(6):1–16.
   Google Scholar
• Chamberlin V. 1947. On some millipeds from Micronesia. Entomol News. 58:41–47.
   Google Scholar
• Cognato AI, Vogler AP. 2001. Exploring data interaction and nucleotide alignment in a multiple gene analysis of Ips (Coleoptera: Scolytinae). Syst Biol. 50(6):758–780.
   PubMed Web of Science ®Google Scholar
• Condé B. 1951a. Un Pénicillate inédit de Nouvelle Zélande (Myriapodes, Diplopodes). RecCant Mus. 6(1):9–14.
   Google Scholar
• Condé B. 1951b. Pénicillates de Basse-Egypte (Myriapodes Diplopodes). Bull Soc Zool Fr. 76:55–63.
   Google Scholar
• Condé B. 1954. Un Polyxénidé aveugle (Diplopodes Pénicillates). Bull Soc Zool Fr. 79:415–418.
   Google Scholar
• Condé B. 1970. Essai sur l’évolution des Diplopodes Pénicillates. Bull Mus Nat Hist Nat 2e série. 41:48–52.
   Google Scholar
• Condé B. 1996. Une approche des Diplopoda Penicillata de L’amérique du Nord. In: Geoffroy J-J, Mauriès J-P, Nguyen Duy-Jacquemin M, editors. Acta Myriapodologica. Memoir Mus Natl Hist. 169:127–135.
   Google Scholar
• Condé B, Jacquemin M. 1963. Diplopodes Pénicillates récoltés à Bombay parPA. Remy. Rev Fr Entomol. 30:68–78.
   Google Scholar
• Condé B, Nguyen Duy-Jacquemin M. 2008. Classification actuelle des Diplopodes Pénicillates (Myriapodes) avec nouvelles définitions des taxa. Bull Soc Zool Fr. 133:291–302.
   Google Scholar
• Cook OF. 1896. A new diplopod fauna in Liberia. Am Nat. 30:593–595.
   Google Scholar
• Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792–1797.
   PubMed Web of Science ®Google Scholar
• Enghoff H. 1984. Phylogeny of Millipedes – a cladistic analysis. J Zoolog Syst Evol Res. 22:8–26.
   Google Scholar
• Farris JS, Albert VA, Källersjö M, Lipscomb D, Kluge AG. 1996. Parsimony jackknifing outperforms neighbor-joining. Cladistics. 12:99–124.
   PubMed Web of Science ®Google Scholar
• Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol. 3(5):294–299.
   PubMedGoogle Scholar
• Gervais P. 1844. Études sur les Myriapodes. Ann Sci Nat sér 3. 2:51–80.
   Google Scholar
• Giribet G, Carranza S, Baguñà J, Riutort M, Ribera C. 1996. First molecular evidence for the existence of a Tardigrada +Arthropoda clade. Mol Biol Evol. 13:76–84.
   PubMed Web of Science ®Google Scholar
• Giribet G, Edgecombe GD, Wheeler WC. 2001. Arthropod phylogeny based on eight molecular loci and morphology. Nature. 413:157–161.
   PubMed Web of Science ®Google Scholar
• Goloboff PA. 1999. Analyzing large data sets in reasonable times: solutions for composite optima. Cladistics. 15:415–428.
   PubMed Web of Science ®Google Scholar
• Goloboff PA, Catalano SA. 2016. TNT version 1.5, including a full implementation of phylogenetic morphometrics. Cladistics. 32:221–238.
   PubMed Web of Science ®Google Scholar
• Ishii K, Nguyen Duy-Jacquemin M, Condé B. 1999. The first penicillate millipedes from the vicinity of Manaus, Central Amazonia, Brazil (Diplopoda: Polyxenida). Amazoniana. 15:239–267.
   Google Scholar
• Jones S. 1937. On two new south Indian pselaphognathous Diplopods. Zool Anz. 119(5–6):138–146.
   Google Scholar
• Jones S. 1944. Mechanism of defence in a Pselaphognathous Diplopod, Unixenus padmanabhii Jones [abstract]. Proc Indian Science Cong. 31(3):94–95.
   Google Scholar
• Kraus O, Brauckmann C. 2003. Fossil giants and surviving dwarfs. Arthropleurida and Pselaphognatha (Atelocerata, Diplopoda): characters, phylogenetic relationships and construction. Verh Nat Ver Hambg. 40:5–50.
   Google Scholar
• Kumar S, Stecher G, Tamura K. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol and Evol. 33:1870–1874.
   PubMed Web of Science ®Google Scholar
• Latreille PA. 1831. Cours d'Entomologie et d'histoire naturelle des Crustacés des Arachnides, des Myriapodes et des Insectes à l'usage des élèves de l'école du Muséum d'Histoire Naturelle. Paris: Muséum d'Histoire Naturelle. Roret; 1–568. doi:10.5962/bhl.title.4854
   Google Scholar
• Latreille PA. 1804. Histoire naturelle, générale et particulière, des Crustacés et des Insectes. Tome septième (1802–1804; An X-XII). Paris, Dufart; p. 467.
   Google Scholar
• Linnaeus C. 1758. Systema Naturae per Regnia tria Naturae, secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis. Editio Decima, Reformata, Tomus. 1:1–823.
   Google Scholar
• Lucas H. 1840. Histoire naturelle des Crustacés, des Arachnides et des Myriapodes. In: Blanchard, editor. Hist. natur. des animaux articulès. 47–600.
   Google Scholar
• Marquet ML, Condé B. 1950. Contribution à la connaissance des Diplopodes Pénicillates d'Afrique et de la région madécasse. Mém Inst Sci Mad Sér A. 4:113–134.
   Google Scholar
• Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES science gateway for inference of large phylogenetic trees. Proceedings of the Gateway Computing Environments Workshop (GCE); New Orleans, LA. p. 1–8.
   Google Scholar
• Miyazawa H, Ueda C, Yahata K, Su Z-H. 2014. Molecular phylogeny of Myriapoda provides insights into evolutionary patterns of the mode in post-embryonic development. Sci Rep. 4(4127):1–9.
   Google Scholar
• Nguyen Duy-Jacquemin M. 2006. Condexenus, a new genus of the millipede family Synxenidae (Diplopoda, Polyxenida) from Namibia. Norw J Entomol. 53:237–248.
   Google Scholar
• Nguyen Duy-Jacquemin M. 2009. Revision of the genera of Polyxenidae bearing pseudoarticulated gnathochilarial sensilla (Diplopoda, Polyxenida, Polyxenidae), with the description of two new species. Zoosystema. 31:829–848.
   Web of Science ®Google Scholar
• Nguyen Duy-Jacquemin M, Azar D. 2004. The oldest records of Polyxenida (Myriapoda, Diplopoda): new discoveries from the Cretaceous ambers of Lebanon and France. Geodiversitas. 26:631–641.
   Web of Science ®Google Scholar
• Nguyen Duy-Jacquemin M, Uys C, Geoffroy J-J. 2011. Two remarkable new species of Penicillata (Diplopoda, Polyxenida) from Table Mountain National Park (Cape Town, South Africa). ZooKeys. 156:85–103.
   Web of Science ®Google Scholar
• Pocock RI. 1894. Res ligusticae. XXI. Contributions to the knowledge of the Diplopoda of Liguria. Ann Mus Genova ser. 214 (157):505–525.
   Google Scholar
• Rasnitsyn AP, Golovatch SI. 2004. The identity of Phryssonotus burmiticus (Cockerell, 1917) (Diplopoda, Polyxenida, Synxenidae) in Cretaceous amber from Myanmar. J Syst Palaeontol. 2:153–157.
   Web of Science ®Google Scholar
• Regier JC, Wilson HM, Shultz JW. 2005. Phylogenetic analysis of Myriapoda using three nuclear protein-coding genes. Mol Phylogenet Evol. 34:147–158.
   PubMed Web of Science ®Google Scholar
• Schubart O. 1947. Os Diplopoda da viagem do naturalista Antenar Leitão de Carvalho aos Rios Araguiai e Amazonas em 1939 e 1940. Bol Mus Nac Rio de Janeiro Nova sér Zool. 82:1–74.
   Google Scholar
• Schwendinger PJ, Giribet G. 2005. The systematics of the south-east Asian genus Fangensis Rambla, 1994 (Opiliones: Cyphophthalmi: Stylocellidae). Invertebr Syst. 19:297–323.
   Web of Science ®Google Scholar
• Scudder SH. 1885. Myriapoda. In: Zittel KA. editor. Handbuch der Palaeontologie, München und Leipzig. 2:721–731.
   Google Scholar
• Short M, Huynh C. 2009. Phryssonotus novaehollandiae (Silvestri, 1923): the sole Australian representative of the millipede Family Synxenidae. Soil Org. 81:695–700.
   Google Scholar
• Silvestri F. 1897. Systema Diplopodum. Ann Mus Genova sér 2a. 16:121–254.
   Google Scholar
• Silvestri F. 1899. Diplopoda nova aL. Biró in Nova-Guinea collecta. Természetrajzi füzetek. 22:205–212.
   Google Scholar
• Silvestri F. 1903. Note diplopodologische. IV, pselaphognatha dell'America meridionale. Boll Mus Torino. 18:15–21.
   Google Scholar
• Silvestri F. 1917. Materiali per una revisione dei Diplopoda Oniscomorpha. II. Specie di Sphaeroteriidae delle regioni Australiana e neozelandese a me note. Boll Lab Zool Gen Agr Portici. 12:61–85.
   Google Scholar
• Silvestri F. 1923. Notizia della presenza del genere Synxenus (Myriapoda Diplopoda) in Catalogna e descrizione di quattro specie. Treb Mus Ci Nat Barcelona. 4(5):5–15.
   Google Scholar
• Silvestri F. 1948. Tavola sinottica dei generi dei Diplopoda Penicillata. Boll Lab Entomol Agr Portici. 8:214–220.
   Google Scholar
• Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313.
   PubMed Web of Science ®Google Scholar
• Talavera G, Castresana J. 2007. Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst Biol. 56:564–577.
   PubMed Web of Science ®Google Scholar
• Vaidya G, Lohman DJ, Meier R. 2011. SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics. 27:171–180.
   PubMed Web of Science ®Google Scholar
• Verhoeff KW. 1924. Results of Dr. E. Mjöberg’s Swedish scientific expeditions to Australia 1910–1913. 34. Myriapoda: Diplopoda. Ark zool. 16(5):1–142.
   Google Scholar
• Verhoeff KW. 1939. Diplopoden der insel mauritius und ihre zoogeographische bedeutung. Jenaische Ztschr F Naturw. 73:37–96.
   Google Scholar
• Verhoeff KW. 1934. Diplopoda Tausendfüssler, Symphyla Zwergfüssler, Pauropoda Wenigfüssler, Chilopoda Hundertfüssler. In: Brohmer P, Ehrmann P, Ulmer, G. editors. Die Tierwelt Mitteleuropas II. Band 3. Lief. Leipzig: Verlag von Quelle & Meyer. p. 1–120.
   Google Scholar
• Verhoeff K. 1941. Uber Diplopoden aus der Turkei. 2. Turkischer Diplopoden – aufsatz. Rev Fac Sci Univ Istanbul ser B. 6(3–4): 278–310.
   Google Scholar
• Villers J. 1789. Caroli Linnaei Entomologia, faunae Suecicae descriptionibus aucta Scopoli, Geoffroy, de Geer, Fabricii, Schrank. 4. Aptera. Sumptibus Piestre et Delamolliere, Lugduni, CCXIII. p. 556.
   Google Scholar
• Whiting MF, Carpenter JC, Wheeler QD, Wheeler WC. 1997. The Strepsiptera problem: phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology. Syst Biol. 46:1–68.
   PubMed Web of Science ®Google Scholar
• Xiong B, Kocher TD. 1991. Comparison of mitochondrial DNA sequences of seven morphospecies of black flies (Diptera: Simuliidae). Genome. 34:306–311.
   PubMed Web of Science ®Google Scholar