195
Views
31
CrossRef citations to date
0
Altmetric
Genetics/Molecular Biology

RAPD-PCR analysis of genetic variation among isolates of Alternaria solani and Alternaria alternata from potato and tomato

, , &
Pages 813-821 | Accepted 13 May 1998, Published online: 28 Aug 2018

LITERATURE CITED

  • Adachi, Y., H. Wantanabe, K. Tanabe, N. Doke, S. Nishimura, and T. Tsuge. 1993. Nuclear ribosomal DNA as a probe for genetic variability in the Japanese pear pathotype of Alternaria alternata. Appl. Environm. Microbiol. 59: 3197–3205.
  • Adams, R. P., and T. Demeke. 1993. Systematic relationships in Juniperus based on random amplified polymorphic DNA. Taxon 42: 553–571.
  • Assigbetse, K. B., D. Fernandez, M. P. Dubois, and J. P. Geiger. 1994. Differentiation of Fusarium oxysporum f. sp. vasinfectum races on cotton by random amplified polymorphic DNA (RAPD) analysis. Phytopathology 84: 622–626.
  • Bonde, R. 1929. Physiological strains of Alternaria solani. Phytopathology 19: 533–548.
  • Brummer, E. C., J. H. Bouton, and G. Kochert. 1995. Analysis of annual Medicago species using RAPD markers. Genome 38: 362–367.
  • Chalmers, K. J., R. Waugh, J. I. Sprent, A. J. Simons, and W. Powell. 1992. Detection of genetic variation between and within populations of Gliricidia septum and G. maculata using RAPD markers. Heredity 69: 465–472.
  • Crowhurst, R. N., B. T. Hawthorne, E. H. A. Rilkkerink, and M. D. Templeton. 1991. Differentiation of Fusarium solani f. sp. Cucurbitae races 1 and 2 by random amplified polymorphic DNA. Curr. Genet. 20: 391–396.
  • Demeke, T., R. P. Adams, and R. Chibbar. 1992. Potential taxonomic use of random amplified polymorphic DNA (RAPD): a case study in Brassica. Theor. Appl. Genet. 84: 990–994.
  • Droby, S., A. Dinoor, D. Prusky, and R. Barkai-Golan. 1984. Pathogenicity of Alternaria alternata on potato in Israel. Phytopathology 74: 537–542.
  • Ellis, M. B., and I. A. S. Gibson. 1975. Alternaria solani #475 set 48. In: CMI descriptions of pathogenic fungi and bacteria. Commonwealth Mycological Institute, Kew, Surrey, England.
  • Excoffier, L., P. E. Smouse, and J. M. Quattro. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction sites. Genetics 131: 479–491.
  • Graham, J., and R. J. McNicol. 1995. An examination of the ability of RAPD markers to determine the relationships within and between Rubus species. Theor. Appl. Genet. 93: 1128–1132.
  • Guthrie, P. A. I., C. W. Magill, R. A. Fredriksen, and G. N. Odvody. 1992. Random amplified polymorphic DNA markers: a system for identifying and differentiating isolates of Colletotrichum graminicola. Phytopathology 82: 832–835.
  • Haley, S. D., P. N. Miklas, J. R. Stavely, J. Byrun, and J. D. Kelly. 1993. Identification of RAPD markers linked to major rust resistance gene block in common bean. Theor. Appl. Genet. 86: 505–512.
  • Hamelin, R. C., G. B. Ouellette, and L. Bernier. 1993. Identification of Gremmeniella abietina races with random amplified polymorphic DNA markers. Molec. Pl.-Microbe Interact. 5: 479–483.
  • Henning, R. G., and L. J. Alexander. 1959. Evidence of existence of physiologic races of Alternaria solani. Pl. Dis. Rep. 43: 298–308.
  • Holmes, G. J., J. W. Eckert, and J. I. Pitt. 1994. Revised description of Penicillium ulaiense and its role as a pathogen of citrus fruits. Phytopathology 85: 522–527.
  • Huang, Z. Y., E. B. Smalley, and R. P. Guries. 1995. Differentiation of Mycosphaerella dearnessii by cultural characteristics and RAPD analysis. Phytopathology 85: 522–527.
  • Huff, D. R., R. Peakall, and P. E. Smouse. 1993. RAPD variation within and among natural populations of outcrossing buffalograss [Buchloe dactyloides (Nut) Engelm.]. Theor. Appl. Genet. 86: 927–934.
  • Kusaba, M., and T. Tsuge. 1995. Phylogeny of Alternaria fungi known to produce host-specific toxins on the basis of variation in internal transcribed spacers of ribosomal DNA. Curr. Genet. 28: 491–498.
  • Lannèr, C., T. Bryngelsson, and M. Gustafsson. 1996. Genetic validity of RAPD markers at the intra- and interspecific level in wild Brassica species with n = 9. Theor. Appl. Genet. 93: 9–14.
  • Lynch, M., and B. G. Milligan. 1994. Analysis of population genetic structure with RAPD markers. Molec. Ecol. 3: 91–99.
  • Maclean, D. J., K. S. Braithwaite, J. A. G. Irwin, J. M. Manners, and J. V. Groth. 1995. Random amplified polymorphic DNA reveals relationships among diverse genotypes in Australian and American collections of Uromyces appendiculatus. Phytopathology 85: 757–765.
  • Michelmore, R. W., I. Paran, and R. V. Kesseli. 1991. Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc. Natl. Acad. Sci. U.S.A. 88: 9828–9832.
  • Neergaard, P. 1945. Danish species of Alternaria and Stemphylium. Oxford University Press, London. 560 pp.
  • Nishimura, S., K. Kohmoto, H. Otani, P. Ramachandran, and F. Tamura. 1982. Pathological and epidemiological aspects of Alternaria alternata infection depending on a host-specific toxin. Pp. 199–214 In: Plant infection: the physiological and biochemical basis. Eds., Y. Asada, W. R. Bushnell, S. Ouchi, and C. P. Vance. Japan Scientific Society Press, Tokyo/Springer-Verlag, Berlin Heidelberg, New York.
  • Nishimura, S., K. Kohmoto, H. Otani, P. Ramachandran, and F. Tamura, M. Sigihara, K. Kohmoto, and H. Otani. 1978. Two different phases in pathogenicity of the Alternaria pathogen causing black spot disease of Japanese pear. J. Fac. Agric. Tottori Univ. 13: 1–10.
  • Petrunak, D. M., and B. J. Christ. 1992. Isozyme variability in Alternaria solani and A. alternata. Phytopathology 82: 1343–1347.
  • Rafalski, J. A., S. V. Tingey, and J. G. K. Williams. 1991. RAPD markers—A new technology for genetic mapping and plant breeding. Agbiotech. News Inform. 3: 645–648.
  • Rands, R. D. 1917. Early blight of potato and related plants. Wisconsin Agric. Exp. Sta. Res. Bull. 42: 48.
  • Rohlf, F.J. 1989. NTYSYS-pc: Numerical taxonomy and multivariate analysis system. Exeter Publishers, Setauket, New York. 176 pp.
  • Simmons, E. G. 1992. Alternaria taxonomy: current status, viewpoint, challenge. Pp. 1–35. In: Alternaria: biology, plant diseases and metabolites. Eds., J. Chelkowski and A. Visconti. Elsevier, Amsterdam.
  • Smith, D. R., and G. R. Stanosz. 1995. Confirmation of two distinct populations of Sphaeropsis sapinea in the north central United States using RAPDs. Phytopathology 85: 699–704.
  • Voigt, K., S. Schleir, and B. Brückner. 1995. Genetic variability in Gibberella fujikuroi and some related species of the genus Fusarium based on random amplification of polymorphic DNA (RAPD). Curr. Genet. 27: 528–535.
  • Williams, J. G. K., A. R. Kubelik, K. J. Livak, J. A. Rifalski, and S. V. Tingey. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl. Acids Res. 18: 6531–6535.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.