Biology of the ectomycorrhizal genus Rhizopogon. V. Phylogenetic relationships in the Boletales inferred from LSU rDNA sequences

LITERATURE CITED

• Begerow D, Bauer R, Oberwinkler F. 1997. Phylogenetic studies on nuclear large subunit ribosomal DNA sequences of smut fungi and related taxa. Can J Bot 75: 2045–2056.
   Google Scholar
• Besl H, Bresinsky A 1997. Chemosystematics of Suillaceae and Gomphidiaceae (suborder Suilllineae). Pl Syst Evol 206: 223–242.
   Web of Science ®Google Scholar
• Besl H, Bresinsky A, Dorsch R, Fischer M. 1996. Zur verwandtschaftlichen stellung der gattung Melanogaster (Melanogastraceae, Basidiomycetes). Z Mykol 62:195–199.
   Google Scholar
• Binder M, Fischer M. 1997. Molekularbiologische charakterisierung der gattungen Boletellus und Xerocomus: Xerocomus pruinatus (Fr. & Hoek) Quel. und verwandte arten. Boll Gruppo Micol G Bresadola 40: 79–90.
   Google Scholar
• Bresinsky A, Jarosch M, Fischer M, Schonberger I, Wittmann-Bresinsky B. 1999. Phylogenetic relationships within Paxillus s. 1. (Basidiomycetes, Boletales): separation of a southern hemisphere genus. Pl Biol 1: 327–333.
   Web of Science ®Google Scholar
• Bruns TD, Fogel R, Taylor JW. 1990. Amplification and sequencing of DNA from fungal herbarium specimens. Mycologia 82: 175–184.
   Web of Science ®Google Scholar
• Bruns TD, Fogel R, Taylor JW., White TJ, Palmer JD. 1989. Accelerated evolution of a false-truffle from a mushroom ancestor. Nature 339: 140–142.
   PubMed Web of Science ®Google Scholar
• Bruns TD, Fogel R, Taylor JW., White TJ, Palmer JD., Szaro TM. 1992. Rate and mode differences between nuclear and mitochondrial small-subunit rRNA genes in mushrooms. Mol Biol Evol 9: 836–855.
   PubMed Web of Science ®Google Scholar
• Bruns TD, Fogel R, Taylor JW., White TJ, Palmer JD., Szaro TM., Gardes M, Cullings KW, Pan JJ, Taylor DL, Horton TR, Kretzer A, Garbelotto M, Li Y. 1998. A sequence database for the identification of ectomycorrhizal basidiomycetes by phylogenetic analysis. Mol Ecol 7: 257–272.
   Web of Science ®Google Scholar
• Castellano MA, Trappe JM, Maser Z, Maser C. 1989. Key to spores of the genera of hypogeous fungi of north temperate forests with special reference to animal mycophagy. Eureka, California: Mad River Press. 186 p.
   Google Scholar
• Dodge CW. 1931. Alpova, a new genus of Rhizopogonaceae, with further notes on Leucogaster and Arcangeliella. Ann Missouri Bot Gard 18: 457–265.
   Google Scholar
• Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19: 11–15.
   Google Scholar
• Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–791.
   PubMed Web of Science ®Google Scholar
• Fischer E. 1933. Gastromyceteae. In: Engler A, Prantl K, eds. Die natürlichen Pflanzen familien. 2nd ed. Leipzig: Wilhelm Engelmann. Vol. 7a. p 1–122.
   Google Scholar
• Hasegawa M, Kishino H, Yano T. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J Mol Evol 22: 160–174.
   PubMed Web of Science ®Google Scholar
• Hawksworth DL, Kirk PM, Sutton BC, Pegler DN. 1995. Ainsworth and Bisby's dictionary of the fungi. 8th ed. Wallingford, UK: CAB International. 616 p.
   Google Scholar
• Heim R. 1971. The interrelationships between Agaricales and Gasteromycetes. In: Peterson RH, ed. Evolution in the higher basidiomycetes. Knoxville, Tennesee: University of Tennesee Press. p 481–504.
   Google Scholar
• Hibbett DS, Pine EM, Langer E, Langer G, Donoghue MJ. 1997. Evolution of gilled mushrooms and puffballs inferred from ribosomal DNA sequences. Proc Natl Acad Sci USA 94: 12002–12006.
   PubMed Web of Science ®Google Scholar
• Hughey BD, Adams GC, Bruns TD, Hibbet DS. 2000. Phylogeny of Colostoma, the gelatinous-stalked puffball, based on nuclear and mitochondrial ribosomal DNA sequences. Mycologia 92: 94–104.
   Web of Science ®Google Scholar
• Jarosch M, Bresinsky A. 1999. Speciation and phylogenetic distances within Paxillus s. str. (Basidiomycetes, Boletales). Pl Biol (Stuttgart) 1: 701–706.
   Web of Science ®Google Scholar
• Kishino H, Hasegawa M. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of the Hominoidea. J Mol Evol 29: 170–179.
   PubMed Web of Science ®Google Scholar
• Kreisel H. 1969. Grundzüge eines natürlichen Systems der Pilze. Jena: Gustav Fischer. 245 p.
   Google Scholar
• Kretzer A, Bruns TD. 1997. Molecular revisitation of the genus Gastrosuillus. Mycologia 89: 586–589.
   Web of Science ®Google Scholar
• Kretzer A, Bruns TD.. 1999. Use of atp6 in fungal phylogenetics: an example from the Boletales. Mol Phyl Evol 13: 483–492.
   PubMed Web of Science ®Google Scholar
• Kretzer A, Bruns TD., Li Y, Szaro T, Bruns TD. 1996. Internal transcribed spacer sequences from 38 recognized species of Suillus sensu lato: phylogenetic and taxonomic implications. Mycologia 88: 776–785.
   Web of Science ®Google Scholar
• Maddison WP, Maddison DR. 1992. MacClade: analysis of phylogeny and character evolution. Version 3.0. Sunderland, Massachusetts: Sinauer Associates. 398 p.
   Google Scholar
• Miller OK Jr., Miller HH. 1988. Gasteromycetes: morphology and developmental features. Eureka, California: Mad River Press. 157 p.
   Google Scholar
• Molina R, Massicotte HB, Trappe JM. 1992. Specificity phenomena in mycorrhizal symbioses: community-ecological consequences and practical implications. In: Allen MF, ed. Mycorrhizal functioning, an integrative plantfungal process. New York: Chapman and Hall. p 357–423.
   Google Scholar
• Moncalvo J, Wang H, Hseu R. 1995. Phylogenetic relationships in Ganoderma inferred from the internal transcribed spacers and 25S ribosomal DNA sequences. Mycologia 87: 223–238.
   Web of Science ®Google Scholar
• Platt JL, Spatafora JW. 2000. Evolutionary relationships of nonsexual lichenized fungi: molecular phylogenetic hypotheses for the genera Siphula and Thanmolia from SSU and LSU rDNA. Mycologia 92: 475–487.
   Web of Science ®Google Scholar
• Singer R. 1986. The Agaricales in modern taxonomy. 4th ed. Koenigstein, Germany: Koeltz Scientific Books. 981 p.
   Google Scholar
• Smith AH. 1971. Taxonomy of ectomycorrhiza-forming fungi. In: Hacskaylo E, ed. Mycorrhizae. Miscellaneous Publication 1189. Washington, DC: US Department of Agriculture, Forest Service. p 1–8.
   Google Scholar
• Smith AH.. 1973. Agaricales and related secotioid Gasteromycetes. In: Ainsworth GC, Sparrow FK, Sussman FS, eds. The fungi IVB, a taxonomic review with keys: basidiomycetes and lower fungi. London: Academic Press. p. 421–450.
   Google Scholar
• Smith AH., Singer R. 1959. Studies on secotiaceous fungi-IV Gastroboletus, Truncocolumella and Chamonixia. Brittonia 11: 205–223.
   Google Scholar
• Smith AH., Singer R., Thiers HD. 1964. A contribution toward a monograph of North American species of Suillus. Ann Arbor, Michigan: Publ by the authors. 116 p.
   Google Scholar
• Smith AH., Singer R., Thiers HD., Zeller SM. 1966. A preliminary account of the North American species of Rhizopogon. Mem New York Bot Gard 14: 1–178.
   Google Scholar
• Swofford DL. 1998. PAUP*: phylogenetic analysis using parsimony, version 4.0 for Macintosh. Sunderland, Massachusetts: Sinauer Associates Inc.
   Google Scholar
• Thiers HD. 1971. Some ideas concerning the phylogeny and evolution of the boletes. In: Peterson RH, ed. Evolution in the higher basidiomycetes. Knoxville, Tennesee: University of Tennesee Press. p 423–440.
   Google Scholar
• Thiers HD.. 1975. The status of the genus Suillus in the United States. Beih Nova Hedwigia 51: 247–278.
   Google Scholar
• Thiers HD.. 1984. The secotioid syndrome. Mycologia 76: 1–8.
   Web of Science ®Google Scholar
• Trappe JM. 1975. A revision of the genus Alpova with notes on Rhizopogon and the Melanogastraceae. Beih Nova Hedwigia 51: 279–309.
   Google Scholar
• Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified DNA from several Cryptococcus species. J Bacterid 172: 4238–4246.
   PubMed Web of Science ®Google Scholar
• Zeller SM. 1949. Keys to the orders, families, and genera of the Gasteromycetes. Mycologia 41: 36–58.
   Web of Science ®Google Scholar