Phylogenetic relationships of Australian and New Zealand Armillaria species

LITERATURE CITED

• Anderson JB, Bailey SS, Pukkila PJ. 1989. Variation in ribosomal DNA among biological species of Armillaria, a genus of root-infecting fungi. Evolution 43: 1652–1662.
   PubMed Web of Science ®Google Scholar
• Anderson JB, Bailey SS, Pukkila PJ., Petsche DM, Smith ML. 1987. Restriction fragment polymorphisms in biological species of Armillaria mellea. Mycologia 79: 69–76.
   Web of Science ®Google Scholar
• Anderson JB, Bailey SS, Pukkila PJ., Petsche DM, Smith ML., Stasovski E. 1992. Molecular phylogeny of Northern Hemisphere species of Armillaria. Mycologia 84: 505–516.
   Web of Science ®Google Scholar
• Boesewinkel HJ. 1977. New plant disease records in New Zealand: records in the period 1969–1976. N Z J Agric Res 20: 583–589.
   Web of Science ®Google Scholar
• Bremer K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42: 795–803.
   PubMed Web of Science ®Google Scholar
• Chillali M, Wipf D, Guillaumin JJ, Mohammed C, Botton B. 1998. Delineation of the European Armillaria species based on the sequences of the internal transcribed spacer (ITS) of ribosomal DNA. New Phytol 138: 553–561.
   Web of Science ®Google Scholar
• Coetzee MPA, Wingfield BD, Coutinho TA, Wingfield MJ. 2000a. Identification of the causal agent of Armillaria root rot in pine plantations in South Africa. Mycologia 92: 777–785.
   Web of Science ®Google Scholar
• Coetzee MPA, Wingfield BD, Coutinho TA, Wingfield MJ., Harrrington TC, Dalevi D, Coutinho TA, Wingfield MJ. 2000b. Geographical diversity of Armillaria mellea s. s. based on phylogenetic analysis. Mycologia 92: 105–113.
   Web of Science ®Google Scholar
• Donoghue MJ, Olmstead RG, Smith JF, Palmer JD. 1992. Phylogenetic relationships of Dipsacales based on rbcL sequences. Ann Mo Bot Gard 79: 333–345.
   Web of Science ®Google Scholar
• Duchesne LC, Anderson JB. 1990. Location and direction of transcription of the 5S rRNA gene in Armillaria. Mycol Res 94: 266–269.
   Web of Science ®Google Scholar
• Eriksson T. 1998. AutoDecay ver. 4.0. Program distributed by the author. Bergius Foundation, Royal Swedish Academy of Science, Stockholm.
   Google Scholar
• Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–791.
   PubMed Web of Science ®Google Scholar
• Harrington TC, Wingfield BD. 1995. A PCR-based identification method for species of Armillaria. Mycologia 87: 280–28.
   Web of Science ®Google Scholar
• Hasegawa M, Kishino H, Yano T-A. 1985. Dating the humanape splitting by a molecular clock of mitochondrial DNA. J Mol Evol 22: 160–174.
   PubMed Web of Science ®Google Scholar
• Herink J. 1973. Taxonomie václavky obecné Armillaria mellea (Vahl ex Fr.) Kummer. In: Hasek J, ed. Sympozium o vaclavky obecne. September 1972. Lesnicka fakulta VSZ Brno. p 21–50.
   Google Scholar
• Hood IA. 1989. Armillaria root disease in New Zealand forests. N Z J For Sci 19: 180–197.
   Google Scholar
• Hood IA. 1992. An illustrated guide to the fungi on wood in New Zealand. Auckland: Auckland University Press. 424 p.
   Google Scholar
• Hood IA., Redfern DB, Kile GA. 1991. Armillaria in planted hosts. In: Shaw CG, Kile GA, eds. Armillaria root disease. USDA Agricultural Handbook No. 691. Washington, DC: USDA. p 122–149.
   Google Scholar
• Hood IA., Redfern DB, Kile GA., Sandberg CJ. 1987. Occurrence of Armillaria rhizomorph populations in the soil beneath indigenous forests in the Bay of Plenty, New Zealand. N Z J For Sci 17: 83–99.
   Google Scholar
• Hsiau PT-W. 1996. The taxonomy and phylogeny of the mycangial fungi from Dendroctonus brevicomis and D. frontalis (Coleoptera: Scolytidae) [Ph.D. Thesis]. Ames, Iowa: Iowa State Univ. 92 p.
   Google Scholar
• Kile GA, McDonald GI, Byler JW. 1991. Ecology and disease in natural forests. In: Shaw CG, Kile GA, eds. Armillaria root disease. USDA Agricultural Handbook No. 691. Washington, DC: USDA. p 102–121.
   Google Scholar
• Kile GA, McDonald GI, Byler JW., Watling R. 1981. An expanded concept of Armillaria luteobubalina. Trans Br Mycol Soc 77: 75–83.
   Web of Science ®Google Scholar
• Kile GA, McDonald GI, Byler JW., Watling R., Wading R. 1983. Armillaria species from south-eastern Australia. Trans Br Mycol Soc 81: 129–140.
   Web of Science ®Google Scholar
• Kile GA, McDonald GI, Byler JW., Watling R., Wading R., Watling R. 1988. Identification and occurrence of Australian Armillaria species, including A. pallidula sp. nov. and comparative studies between them and non-Australian tropical and Indian Armillaria. Trans Br Mycol Soc 91: 305–315.
   Web of Science ®Google Scholar
• Pearce MH, Malajczuk N, Kile GA. 1986. The occurrence and impact of Armillaria luteobubalina in the Karri (Eucalyptus diversicolor F. Muell.) forest of western Australia. Aust Forest Res 16: 243–259.
   Web of Science ®Google Scholar
• Piercey-Normore MD, Egger KN, Bérubé JA. 1998. Molecular phylogeny and evolutionary divergence of North American biological species of Armillaria. Mol Phylogenet Evol 10: 49–66.
   PubMed Web of Science ®Google Scholar
• Podger FD, Kile GA, Watling R, Fryer J. 1978. Spread and effects of Armillaria luteobubalina sp. nov. in an Australian Eucalyptus regnans plantation. Trans Br Mycol Soc 71: 77–87.
   Web of Science ®Google Scholar
• Raabe RD. 1962. Host list of the root rot fungus, Armillaria mellea. Hilgardia 33: 25–88.
   Google Scholar
• Shaw CG, MacKenzie M, Toes EHA, Hood IA. 1981. Cultural characteristics and pathogenicity to Pinus radiata of Armillaria novae-zelandiae arid A. limonea. N Z J For Sci 11: 65–70.
   Web of Science ®Google Scholar
• Shearer BL. 1994. The major plant pathogens occurring in native ecosystems of south-western Australia. J R Soc West Aust 77: 113–122.
   Google Scholar
• Shearer BL., Tippett JT. 1988. Distribution and impact of Armillaria luteobubalina in the Eucalyptus marginata forest of south-western Australia. Aust J Bot 36: 433–445.
   Web of Science ®Google Scholar
• Smith ML, Anderson JB. 1989. Restriction fragment length polymorphisms in mitochondrial DNAs of Armillaria: identification of North American biological species. Mycol Res 93: 247–256.
   Web of Science ®Google Scholar
• Staude F. 1857. Die schwämme Mitteldeutschlands insbesonderes des Herzogthums. Coburg. 148 p.
   Google Scholar
• Stevenson G. 1964. The Agaricales of New Zealand: V. Tricholomataceae. Kew Bull 19: 1–59.
   Google Scholar
• Swofford DL. 1998. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Vers. 4. Sunderland, Massachusetts: Sinauer Associates.
   Google Scholar
• Terashima K, Cha JY, Yajima T, Igarashi T, Miura K. 1998. Phylogenetic analysis of Japanese Armillaria based on the intergenic spacer (IGS) sequences of their ribosomal DNA. Eur J For Pathol 28: 11–19.
   Web of Science ®Google Scholar
• Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673–4680.
   PubMed Web of Science ®Google Scholar
• Volk TJ, Burdsall HH. 1995. A nomenclatural study of Armillaria and Armillariella species (Basidiomycotina, Tricholomataceae). Oslo: Eko-trykk A/S. 121 p.
   Google Scholar
• Volk TJ, Burdsall HH., Banik MT. 1996. Armillaria nabsnona, a new species from western North America. Mycologia 88: 484–491.
   Web of Science ®Google Scholar
• Watling R, Kile GA, Burdsall HH. 1991. Nomenclature, taxonomy, and identification. In: Shaw CG, Kile GA, eds. Armillaria root disease. USDA Agricultural Handbook No. 691. Washington, DC: USDA. p 1–9.
   Google Scholar
• White TJ, Bruns T, Lee S, Tailor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. San Diego: Academic Press. p 315–322.
   Google Scholar