569
Views
9
CrossRef citations to date
0
Altmetric
Systematics

Resolving the Melampsora epitea complex

, , &
Pages 391-407 | Received 09 Nov 2016, Accepted 02 May 2017, Published online: 22 Jun 2017

Literature cited

  • Arthur JC. 1962. Manual of the rusts in United States and Canada. New York, New York: Hafner Publishing Company. 438 p.
  • Azbukina ZM. 1974. Rust fungi of the Soviet Far East. Moscow, Russia: Nauka Publishers. p. 120–140. Russian.
  • Bagyanarayana G. 2005. The species of Melampsora on Salix (Salicaceae). In: Pei MH, McCracken AR, eds. Rust diseases of willow and poplar. Wallingford, UK: CABI Publishing. p. 20–50.
  • Bennett C, Aime MC, Newcombe G. 2011. Molecular and pathogenic variation within Melampsora on Salix in western North America reveals numerous cryptic species. Mycologia 103:1004–1018.
  • Bubner B, Wunder S, Zaspel I, Zander M, Gloger J, Fehrenz S, Ulrichs C. 2014. Melampsora rust species on biomass willows in central and north-eastern Germany. Fungal Biology 118:910–923.
  • Cao ZM, Li ZQ. 1999. Rust fungi of Qinling Mountains. Beijing, China: China Forestry Publishing House. p. 29–41. Chinese.
  • Carstens BC, Dewey TA. 2010. Species delimitation using a combined coalescent and information-theoretic approach: an example from North American myotis bats. Systematic Biology 59:400–414.
  • Clement M, Posada D, Crandall K. 2000. TCS: a computer program to estimate gene genealogies. Molecular Ecology 9:1657–1660.
  • Damadi SM, Pei MH, Smith JA, Abbasi M. 2011. A new species of Melampsora rust on Salix elbursensis from Iran. Forest Pathology 41:392–397.
  • Drummond AJ, Rambaut A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 7:214.
  • Ezard T, Fujisawa T, Barraclough T. 2009. Species limits by threshold statistics. [cited 2015 August 15]. Available from: http://R-Forge.R-project.org/projects/splits/
  • Farr DF, Rossman AY. 2015. Fungal Databases, Systematic Mycology and Microbiology Laboratory, Agricultural Research Service, United States Department of Agriculture. [cited 2015 April 1]. Available from: http://nt.ars-grin.gov/fungaldatabases/
  • Fujisawa T, Barraclough TG. 2013. Delimiting species using single-locus data and the generalized mixed Yule coalescent (GMYC) approach: a revised method and evaluation on simulated datasets. Systematic Biology 1:1–18.
  • González-García S, Mola-Yudego B, Dimitriou I, Aronsson P, Murphy R. 2012. Environmental assessment of energy production based on long term commercial willow plantations in Sweden. Science of the Total Environment 421:210–219.
  • Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41:95–98.
  • Hiratsuka N, Kaneko S. 1982. A taxonomic revision of Melampsora on willows in Japan. Reports of the Tottori Mycological Institute 20:1–32.
  • Hiratsuka N, Sato S, Katsuya K, Kakishima M, Hiratsuka Y, Kaneko S, Ono Y, Sato T, Harada Y. 1992. The rust flora of Japan. Tsukuba, Ibaraki, Japan: Tsukuba Shuppankai. 1205 p.
  • Huelsenbeck JP, Ronquist, F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755.
  • Hylander N, Jørstad I, Nannfeldt JA. 1953. Enumeratio uredinearum Scandinavicarum. Opera Botanica 1:1–102.
  • Jørstad I. 1934. A study on Kamtchatka Uredinales. Oslo, Norway: I kommisjon hos Jacob Dybwad. 183 p.
  • Kenaley SC, Smart LB, Hudler GW. 2014. Genetic evidence for three discrete taxa of Melampsora (Pucciniales) affecting willows (Salix spp.) in New York State. Fungal Biology 118:704–720.
  • Klebahn H. 1897. Vorläufiger Bericht ϋber Kulturversuche mit heteroecischen Rospilizen. Zeitschrift fϋr Pflanzen Krankhieten 7:129–130. German.
  • Klebahn H. 1899. Kulturvershche mit heterocischen Rostpilzen = 7 \* ROMAN VII. Zeitschrift fϋr Pflanzen Krankhieten 9:137–147. German.
  • Klebahn H. 1900. Kulturvershche mit Rostpilzen. = 8 \* ROMAN VIII. Jahrbücher für Wissenschaftliche Botanik 34:347–404. German.
  • Klebahn H. 1902. Kulturvershche mit Rostpilzen = 10 \* ROMAN X. Zeitschrift fϋr Pflanzen Krankhieten 12:17–44. German.
  • Klebahn H. 1914. Uredineae. Leipzig, Germany: Kryptogamenflora der Mark Brandenburg Va. Gebrüder Borntraeger. p. 69–903. German.
  • Kubatko LS, Carstens BC, Knowles LL. 2009. STEM: species tree estimation using maximum likelihood for gene trees under coalescence. Bioinformatics 1:1–3.
  • Kuzovkina Y, Quigley M. 2005. Willows beyond wetlands: uses of Salix L. species for environmental projects. Water, Air, & Soil Pollution 162:183–204.
  • Liu WX. 2005. A taxonomic study of Melampsora species on Salicaceae plants in Inner Mongolia [master’s thesis]. Hohhot, China: Inner Mongolia Agricultural University. 44 p. Chinese.
  • Matsumoto T. 1915. Impfversuche mit Melampsora auf Japanischen Weiden. Transactions of the Sapporo Natural History Society 6:22–35. German.
  • Milne JM, Helfer S, Kirk C, Hollingsworth PM, Ennos RA. 2012. Molecular evidence indicates that subarctic willow communities in Scotland support a diversity of host-associated Melampsora rust taxa. Fungal Biology 116:603–612.
  • Pei MH. 2005. A brief review of Melampsora rusts on Salix. In: Pei MH, McCracken AR, eds. Rust diseases of willow and poplar. Wallingford, UK: CABI Publishing. p. 11–28.
  • Pei MH, Bayon C, Ruiz C. 2005. Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information. Mycological Research 109:401–409.
  • Pei MH, Royle DJ, Hunter T. 1993. Identity and host alternation of some willow rusts (Melampsora spp.) in England. Mycological Research 97: 845–851.
  • Posada D, Crandall KA. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817–818.
  • Rambaut A, Drummond AJ. 2007. Tracer version 1.4. [cited 2015 August 15]. Available from: http://beast.bio.ed.ac.uk/Tracer
  • Schneider O. 1905. Weitere Versuche mit schweizerischen Weidenmelampsoren. Vorlaufige Mitteilung. Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene. 2.Naturwissenschaftliche Abteilung 15: 232–234. German.
  • Smith JA, Blanchette RA, Newcombe G. 2004. Molecular and morphological characterization of the willow rust fungus, Melampsora epitea, from arctic and temperate hosts in North America. Mycologia 96:1330–1338.
  • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312–1313.
  • Tai FL. 1979. Sylloge fungorum sinicorum. Beijing, China: Science Press. 1527 p. Chinese.
  • Thűmen F. 1879. Melampsora salicina der Weidenrost. Eine monographische. Mittheilungen aus dem forstlichen Versuchswesen Österreichs 2:25–46. German.
  • Virtudazo EV, Nakamura H, Kakishima M. 2001. Phylogenetic analysis of sugarcane rusts based on sequences of ITS, 5.8 S rDNA and D1/D2 regions of LSU rDNA. Journal of General Plant Pathology 67:28–36.
  • White TJ, Bruns T, Lee SB, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. New York, New York: Academic Press. p. 315–322.
  • Wilson M, Henderson DM. 1966. The British rust fungi. Cambridge, UK: Cambridge University Press. 404 p.
  • Zhao P, Tian CM, Yao YJ, Wang Q, Kakishima M, Yamaoka Y. 2014. Melampsora salicis-sinicae (Melampsoraceae, Pucciniales), a new rust fungus found on willows in China. Mycoscience 55:390–399.
  • Zhao P, Tian CM, Yao YJ, Wang Q, Yamaoka Y, Kakishima M. 2013. New records of Melampsora species on willows in China. Mycotaxon 123:81–89.
  • Zhao P, Tian CM, Yao YJ, Wang Q, Yamaoka Y, Kakishima M. 2015a. Two new species and one new record of Melampsora on willows from China. Mycological Progress 14:66.
  • Zhao P, Wang QH, Tian CM, Kakishima M. 2015b. Integrating a numerical taxonomic method and molecular phylogeny for species delimitation of Melampsora species (Melampsoraceae, Pucciniales) on willows in China. PLoS One 17:e0144883.
  • Zhao P, Wang QH, Tian CM, Yao YJ, Wang Q, Yamaoka Y, Kakishima M. 2015c. A morphological and molecular survey of Japanese Melampsora species on willows reveals a new species and two new records. Mycological Progress 14:101.
  • Zhuang JY. 1986. Uredinales from east Himalaya. Acta Microbiologica Sinica 5:75–85.
  • Zhuang JY. 1989. Rust fungi from the desert of northern Xinjiang. Acta Microbiologica Sinica 8:259–269.
  • Zhuang JY. 1994. An annotated checklist of rust fungi from the Mt. Qomolangma region (Tibetan Everest Himalaya). Mycosystema 7:37–87.
  • Zhuang JY, Wang SR. 2006. Uredinales of Gansu in northwestern China. Journal of Fungal Research 4: 1–11.
  • Zhuang WY. 2005. Fungi of northwestern China. New York, New York: Mycotaxon Ltd. 432 p.
  • Ziller WG. 1974. The tree rusts of western Canada. Ottawa, Canada: Environment Canada, Forestry Service. 272 p.

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.