Ophiostoma haidaense, sp. nov., a new member of the O. piceae species complex associated with yellow-cedar, Callitropsis nootkatensis

LITERATURE CITED

• Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215:403–410. doi:10.1016/S0022-2836(05)80360-2.
   PubMed Web of Science ®Google Scholar
• Chang R, Duong TA, Taerum SJ, Wingfield MJ, Zhou X, Yin M, De Beer ZW. 2019. Ophiostomatoid fungi associated with the spruce bark beetle Ips typographus, including 11 new species from China. Persoonia. 42(1):50–74. doi:10.3767/persoonia.2019.42.03.
   PubMedGoogle Scholar
• Chung WH, Kim JJ, Yamaoka Y, Uzunovic A, Masuya H, Breuil C. 2006. Ophiostoma breviusculum sp. nov. (Ophiostomatales, Ascomycota) is a new species in the Ophiostoma piceae complex associated with bark beetles infesting larch in Japan. Mycologia. 98(5):801–814. doi:10.1080/15572536.2006.11832651.
   PubMed Web of Science ®Google Scholar
• Comeau VM, Daniels LD, Zeglen S. 2021. Climate induced yellow-cedar decline on the island archipelago of Haida Gwaii. Ecosphere. 12(3):e03427. doi:10.1002/ecs2.3427.
   Web of Science ®Google Scholar
• Darriba D, Posada D, Kozlov AM, Stamatakis A, Morel B, Flouri T. 2020. ModelTest-NG: a new and scalable tool for the selection of DNA and protein evolutionary models. Mol Biol Evol. 37:291–294. doi:10.1093/molbev/msz189.
   PubMed Web of Science ®Google Scholar
• Davidson RW. 1958. Additional species of Ophiostomataceae from Colorado. Mycologia. 50(5):661–670. doi:10.1080/00275514.1958.12024761.
   Web of Science ®Google Scholar
• de Beer ZW, Procter M, Wingfield MJ, Marincowitz S, Duong TA. 2022. Generic boundaries in the Ophiostomatales reconsidered and revised. Stud Mycol. 101:57–120. doi:10.3114/sim.2022.101.02.
   PubMedGoogle Scholar
• de Beer Zh, Wingfield MJ. 2013. Emerging lineages in the Ophiostomatales. In: Seifert KA, De Beer ZW, and Wingfield MJ, et al., editors. The Ophiostomatoid Fungi: expanding frontiers [CBS Biodiversity Series no. 12.]. Utrecht: CBS-KNAW Fungal Biodiversity Institute. p. 21–46.
   Google Scholar
• DiGuistini S, Wang Y, Liao NY, Taylor G, Tanguay P, Feau N, Henrissat B, Chan SK, Hesse-Orce U, Alamouti SM, et al. 2011. Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. Proc Natl Acad Sci USA. 108(6):2504–2509. doi:10.1073/pnas.1011289108.
   PubMed Web of Science ®Google Scholar
• Dowding P. 1970. Colonization of freshly bared pine sapwood surfaces by staining fungi. Trans Br Mycol. 55:399–412. doi:10.1016/S0007-1536(70)80061-4.
   Web of Science ®Google Scholar
• Feau N, Herath P, Hamelin RC. 2023. DNA-barcoding identification of plant pathogens for disease diagnostics. In: Foroud NA, Neilson JAD, editors. Plant-pathogen interactions. Methods in molecular biology. Vol. 2659. New York (NY): Humana. p. 37–49.
   Google Scholar
• Griffin HD. 1968. The genus Ceratocystis in Ontario. Can J Bot. 46:689e718. doi:10.1139/b68-094.
   Google Scholar
• Haridas S, Wang Y, Lim L, Massoumi Alamouti S, Jackman S, Docking R, Robertson G, Birol I, Bohlmann J, Breuil C, et al. 2013. The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera. BMC Genom. 14:373. doi:10.1186/1471-2164-14-373.
   PubMed Web of Science ®Google Scholar
• Harrington TC, McNew D, Steimel J, Hofstra D, Farrell R. 2001. Phylogeny and taxonomy of the Ophiostoma piceae complex and the Dutch elm disease fungi. Mycologia. 93(1):111–136. doi:10.1080/00275514.2001.12061284.
   Web of Science ®Google Scholar
• Hennon PE. 1990. Fungi on Chamaecyparis nootkatensis. Mycologia. 82(1):59–66. doi:10.1080/00275514.1990.12025841.
   Web of Science ®Google Scholar
• Hennon PE, D’Amore DV, Schaberg PG, Wittwer DT, Shanley CS. 2012. Shifting climate, altered niche, and a dynamic conservation strategy for yellow-cedar in the north pacific coastal rainforest. BioScience. 62:147–158. doi:10.1525/bio.2012.62.2.8.
   Web of Science ®Google Scholar
• Hennon PE, Shaw CG III, Hansen EM. 1990. Symptoms and fungal associations of declining Chamaecyparis nootkatensis in southeast Alaska. Plant Dis. 74:267–273. doi:10.1094/PD-74-0267.
   Web of Science ®Google Scholar
• Jacobs K, Bergdahl DR, Wingfield MJ, Halik S, Seifert KA, Bright DE, Wingfield BD. 2004. Leptographium wingfieldii introduced into North America and found associated with exotic Tomicus piniperda and native bark beetles. Mycol Res. 108:411–418. doi:10.1017/S0953756204009748.
   PubMed Web of Science ®Google Scholar
• Jankowiak R, Bilański P, Strzałka B, Linnakoski R, Bosak A, Hausner G. 2019. Four new Ophiostoma species associated with conifer-and hardwood-infesting bark and ambrosia beetles from the Czech Republic and Poland. Antonie van Leeuwenhoek. 112:1501–1521. doi:10.1007/s10482-019-01277-5.
   PubMed Web of Science ®Google Scholar
• Jankowiak R, Szewczyk G, Bilański P, Jazłowiecka D, Harabin B, Linnakoski R. 2021. Blue-stain fungi isolated from freshly felled Scots pine logs in Poland, including Leptographium sosnaicola sp. nov. For Pathol. 51:e12672. doi:10.1111/efp.12672.
   Web of Science ®Google Scholar
• Karchesy JJ, Kelsey RG, González-Hernández MP. 2018. Yellow-cedar, Callitropsis (Chamaecyparis) nootkatensis, secondary metabolites, biological activities, and chemical ecology. J Chem Ecol. 44:510–524. doi:10.1007/s10886-018-0956-y.
   PubMed Web of Science ®Google Scholar
• Karnovsky MJ. 1965. A formaldehyde-glutaraldehyde fixative of high osmolarity for use in electron microscopy. J Cell Biol. 27:137A.
   Web of Science ®Google Scholar
• Katoh K, Standley DM. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30:772–780. doi:10.1093/molbev/mst010.
   PubMed Web of Science ®Google Scholar
• Kim JJ, Kim SH, Lee S, Breuil C. 2003. Distinguishing Ophiostoma ips and O. montium two bark beetle-associated sapstain fungi. FEMS Microb Lett. 222:187–192. doi:10.1016/S0378-1097(03)00304-5.
   PubMed Web of Science ®Google Scholar
• Kirisits T. 2013. Dutch elm disease and other Ophiostoma diseases. In: Gonthier P, Nicolotti G, editors. Infectious forest diseases. Wallingford (UK): CABI; p. 256–282.
   Google Scholar
• Li J, Masuya H, Okane I, Yamaoka Y. 2016. Ophiostoma sugadairense, a new species in the Ophiostoma piceae complex associated with bark beetles infesting Japanese larch in Japan. Mycoscience. 58(3):154–168. doi:10.1016/j.myc.2016.12.003.
   Web of Science ®Google Scholar
• Linnakoski R, De Beer ZW, Ahtiainen J, Sidorov E, Niemelä P, Pappinen A, Wingfield MJ. 2010. Ophiostoma spp. associated with pine-and spruce-infesting bark beetles in Finland and Russia. Persoonia. 25(1):72–93. doi:10.3767/003158510X550845.
   PubMedGoogle Scholar
• Mathiesen-Käärik A. 1960. Studies on the ecology, taxonomy and physiology of Swedish insect-associated blue stain fungi, especially the genus Ceratocystis. Oikos. 11:1–25. doi:10.2307/3564881.
   Google Scholar
• O’Donnell K, Cigelnik E. 1997. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol Phyl Evol. 7:103–116. doi:10.1006/mpev.1996.0376.
   PubMed Web of Science ®Google Scholar
• Plourde KV, Bernier L. 2014. A rapid virulence assay for the Dutch elm disease fungus Ophiostoma novo-ulmi by inoculation of apple (Malus × domestica ‘Golden Delicious’) fruits. Plant Pathol. 63:1078–1085. doi:10.1111/ppa.12177.
   Web of Science ®Google Scholar
• Powell MA, Eaton RA, Webber JF. 1994. The role of microarthropods in the defacement of sawn lumber by sapstain and mould fungi. Can J For Res. 25:1148–1156. doi:10.1139/x95-127.
   Google Scholar
• Samson RA, Houbraken J, Thrane U. 2010. CBS-KNAW Fungal Biodiversity Centre; The Netherlands: 2010. Food Indoor Fungi. p. 390.
   Google Scholar
• Six DL. 2003. Bark beetle-fungus symbioses. In: Bourtzis K, Miller T, editors. Insect Symbiosis. Boca Raton (FL, USA): CRC Press; p. 97–114.
   Google Scholar
• Smith RS. 1970. Black stain in yellow cedar heartwood. Can J Bot. 48(10):1731–1739. doi:10.1139/b70-256.
   Google Scholar
• Smith RS, Cserjesi AJ. 1970. Degradation of nootkatin by fungi causing black heartwood stain in yellow cedar. Can J Bot. 48(10):1727–1729. doi:10.1139/b70-255.
   Google Scholar
• Solheim H. 1986. Species of Ophiostomataceae isolated from Picea abies infested by the bark beetle Ips typographic. Nord J Bot. 6(2):199–207. doi:10.1111/j.1756-1051.1986.tb00874.x.
   Web of Science ®Google Scholar
• Stamatakis A. 2014. RAxML Version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics. 30:1312–1313. doi:10.1093/bioinformatics/btu033.
   PubMed Web of Science ®Google Scholar
• Stöver BC, Müller KF. 2010. TreeGraph 2: combining and visualizing evidence from different phylogenetic analyses. BMC Bioinf. 11:7. doi:10.1186/1471-2105-11-7.
   PubMed Web of Science ®Google Scholar
• Swofford DL. 2003. PAUP*. Phylogenetic analysis using parsimony (* and other methods). Version 4. Sunderland: Sinauer Associates.
   Google Scholar
• Uzunovic A, Seifert KA, Kim SH, Breuil C. 2000. Ophiostoma setosum, a common sapwood staining fungus from western North America, a new species of the Ophiostoma piceae complex. Mycol Res. 104(4):486–494. doi:10.1017/S0953756299001446.
   Google Scholar
• Uzunovic A, Weber J. 1998. Comparison of bluestain fungi grown in vitro and in freshly cut pine billets. Eur J For Path. 28:323–333. doi:10.1111/j.1439-0329.1998.tb01187.x.
   Web of Science ®Google Scholar
• Wang Z, Liu Y, Wang H, Meng X, Liu X, Decock C, Zhang X, Lu Q. 2020. Ophiostomatoid fungi associated with Ips subelongatus, including eight new species from northeastern China. IMA Fungus. 11:1–29. doi:10.1186/s43008-019-0026-2.
   PubMed Web of Science ®Google Scholar
• Wang Z, Zhou Q, Zheng G, Fang J, Lu Q. 2021. Abundance and diversity of ophiostomatoid fungi associated with the Great Spruce Bark Beetle (Dendroctonus micans) in the Northeastern Qinghai-Tibet Plateau. Front Microbiol. 12:721395. doi:10.3389/fmicb.2021.721395.
   PubMed Web of Science ®Google Scholar
• White TJ, Bruns T, Lee SB, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York: Academic; p. 315–322.
   Google Scholar
• Whitney HS, Blauel RA. 1972. Ascospore dispersion in Ceratocystis spp. and Europhium clavigerum in conifer resin. Mycologia. 64(2):410–414. doi:10.1080/00275514.1972.12019275.
   Web of Science ®Google Scholar
• Wong CM, Daniels LD. 2017. Novel forest decline triggered by multiple interactions among climate, an introduced pathogen and bark beetles. Global Chang Biol. 23(5):1926–1941. doi:10.1111/gcb.13554.
   PubMed Web of Science ®Google Scholar
• Yin M, Wingfield MJ, Zhou X, De Beer ZW. 2016. Multigene phylogenies and morphological characterization of five new Ophiostoma spp. associated with spruce-infesting bark beetles in China. Fungal Biol. 120(4):454–470. doi:10.1016/j.funbio.2015.12.004.
   PubMed Web of Science ®Google Scholar
• Yun YH, Hyun MW, Suh DY, Kim SH. 2009. Characterization of a sapstaining fungus, Ophiostoma floccosum, isolated from the sapwood of Pinus thunbergii in Korea. Mycobiology. 37(1):5–9. doi:10.4489/MYCO.2009.37.1.005.
   PubMedGoogle Scholar
• Zhao T, Kandasamy D, Krokene P, Chen J, Gershenzon J, Hammerbacher A. 2019. Fungal associates of the tree-killing bark beetle, Ips typographus, vary in virulence, ability to degrade conifer phenolics and influence bark beetle tunneling behavior. Fungal Ecol. 38:71–79. doi:10.1016/j.funeco.2018.06.003.
   Web of Science ®Google Scholar