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Research articles

Relationships, gene flow and species boundaries among New Zealand Fuscospora (Nothofagaceae: southern beech)

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Pages 389-406 | Received 21 Mar 2014, Accepted 28 Jul 2014, Published online: 12 Nov 2014

References

  • Acosta MC, Mathiasen P, Premoli AC 2012. Predominant regeneration strategy results in species-specific genetic patterns in sympatric Nothofagus s.s. congeners (Nothofagaceae). Australian Systematic Botany 60: 319–327. 10.1071/BT11277
  • Acosta MC, Premoli AC 2010. Evidence of chloroplast capture in South American Nothofagus (subgenus Nothofagus, Nothofagaceae). Molecular Phylogenetics and Evolution 54: 235–242. 10.1016/j.ympev.2009.08.008
  • Armstrong JM, Wylie AP 1965. A new basic chromosome number in the Family Fagaceae. Nature 206: 1340–1341. 10.1038/2051340b0
  • Beever RE, Houliston GJ, Armstrong TTJ 2013. Geographic patterns of genetic variation in Cordyline australis; does fingerprinting recover phenotypic and phenological patterns? New Zealand Journal of Botany 51: 3–12. 10.1080/0028825X.2012.728136
  • Botstein D, White RL, Skolnick M, Davis RW 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. American Journal of Human Genetics 32: 314–331.
  • Cockayne L 1926. Monograph of the New Zealand beech forests. Part 1. The ecology of the forests and taxonomy of the beeches. Wellington, Government Printer.
  • Cockayne L, Atkinson E 1926. On the New Zealand wild hybrids of Nothofagus. Genetica 8: 1–43. 10.1007/BF01481819
  • Dawson MI 2000. Index of chromosome numbers of indigenous New Zealand Spermatophytes. New Zealand Journal of Botany 38: 47–150. 10.1080/0028825X.2000.9512673
  • Department of Conservation undated. Piano Flat and Waikaia Forest. http://www.doc.govt.nz/upload/documents/parks-and-recreation/tracks-and-walks/southland/pianof-waikaiaforest.pdf (accessed 5 February 2014).
  • Earl DA, von Holdt BM 2012. Structure harvester: a website and program for visualizing structure output and implementing the Evanno method. Conservation Genetics Resources 4: 359–361. 10.1007/s12686-011-9548-7
  • Evanno G, Regnaut S, Goudet J 2005. Detecting the number of clusters of individuals using the software structure: a simulation study. Molecular Ecology 14: 2611–2620. 10.1111/j.1365-294X.2005.02553.x
  • Falush D, Stephens M, Pritchard JK 2003. Inference of population structure: extensions to linked loci and correlated allele frequencies. Genetics 164: 1567–1587.
  • Galbany-Casals M, Blanco-Moreno JM, Garcia-Jacas N, Breitwieser I, Smissen RD 2011. Genetic variation in Mediterranean Helichrysum italicum (Asteraceae: Gnaphalieae): do disjunct populations of subsp. microphyllum have a common origin? Plant Biology 13: 678–687.
  • Govaerts R, Frodin DG 1999. World checklist and bibliography of Fagales. Kew, Royal Botanic Gardens.
  • Haase P 1992. Isozyme variability and biogeography of Nothofagus truncata (Fagaceae). New Zealand Journal of Botany 30: 315–328. 10.1080/0028825X.1992.10412910
  • Haase P 1993a. Isozyme studies of New Zealand Nothofagus species (southern beech) using leaf extracts. Silvae Genetica 42: 46–51.
  • Haase P 1993b. Genetic variation, geneflow, and the ‘founder effect’ in pioneer populations of Nothofagus menziesii (Fagaceae), South Island, New Zealand. Journal of Biogeography 20: 79–85. 10.2307/2845741
  • Haase P 1994. Genetic relationships and inferred evolutionary divergence in the New Zealand taxa of Nothofagus – results from isozyme analysis. Australian Systematic Botany 7: 47–55. 10.1071/SB9940047
  • Heenan PB, Smissen RD 2013. Revised circumscription of Nothofagus and recognition of the segregate genera Fuscospora, Lophozonia, and Trisyngyne (Nothofagaceae). Phytotaxa 146: 1–31. 10.11646/phytotaxa.146.1.1
  • Hill RS, Read J 1991. A revised infrageneric classification of Nothofagus (Fagaceae). Botanical Journal of the Linnean Society 105: 37–72. 10.1111/j.1095-8339.1991.tb00199.x
  • Hooker JD 1844. Fagus cliffortioides. In: Hooker WJ ed. Icones plantarum 7. London, Hippolyte Baillière. Tab 673.
  • Hurst JM, Stewart GH, Perry GLW, Wiser SK, Norton DA 2012. Determinants of tree mortality in mixed old-growth Nothofagus forest. Forest Ecology and Management 270: 189–199. 10.1016/j.foreco.2012.01.029
  • Jones RC, Vaillancourt RE, Jordan GJ 2004. Microsatellites for use in Nothofagus cunninghamii (Nothofagaceae) and related species. Molecular Ecology Notes 4: 14–16. 10.1046/j.1471-8286.2003.00558.x
  • Knapp M, Stöckler K, Havell D, Delsuc F, Sebastiani F, Lockhart PJ 2005. Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech). PLoS Biology 3: e14. 10.1371/journal.pbio.0030014
  • Latta RG 2003. Gene flow, adaptive population divergence and comparative population structure across loci. New Phytologist 161: 51–58. 10.1046/j.1469-8137.2003.00920.x
  • Leathwick JR 1995. Climatic relationships of some New Zealand forest tree species. Journal of Vegetation Science 6: 237–248. 10.2307/3236219
  • Leathwick JR 1998. Are New Zealand's Nothofagus species in equilibrium with their environment? Journal of Vegetation Science 9: 719–732.
  • Leschen RA, Buckley TR, Harman HM, Schulmeister J 2008. Determining the origin and age of the Westland beech (Nothofagus) gap, New Zealand, using fungus beetle genetics. Molecular Ecology 17: 1256–1276. 10.1111/j.1365-294X.2007.03630.x
  • Liu K, Muse SV 2005. PowerMarker: integrated analysis environment for genetic marker data. Bioinformatics 21: 2128–2129. 10.1093/bioinformatics/bti282
  • Marchelli P, Gallo LA 2001. Genetic diversity and differentiation in a southern beech subjected to introgressive hybridization. Heredity 87: 284–293. 10.1046/j.1365-2540.2001.00882.x
  • Marchelli P, Gallo LA 2004. The combined role of glaciation and hybridization in shaping the distribution of genetic variation in a Patagonian southern beech. Journal of Biogeography 31: 451–460. 10.1046/j.0305-0270.2003.01008.x
  • Manos PS 1997. Systematics of Nothofagus (Nothofagaceae) based on rDNA spacer sequences (ITS): taxonomic congruence with morphology and plastid sequences. American Journal of Botany 84: 1137–1155. 10.2307/2446156
  • Manos PS, Nixon KC, Doyle JT 1993. Cladistic analysis of restriction site variation within the chloroplast DNA inverted repeat region of selected Hamamelididae. Systematic Botany 18: 551–562. 10.2307/2419533
  • Manos PS, Steele KP 1997. Phylogenetic analyses of “higher” Hamamelididae based on plastid sequence data. American Journal of Botany 84: 1407–1419. 10.2307/2446139
  • Martin PG, Dowd JM 1993. Using sequences of rbcL to study phylogeny and biogeography of Nothofagus species. Australian Systematic Botany 6: 441–447. 10.1071/SB9930441
  • Mayr E 1942. Systematics and the origin of species. New York, Columbia University Press.
  • McGlone MS, Hall MJ, Wilmshurst J 2011. Seasonality in the early Holocene: extending fossil-based estimates with a forest ecosystem model. The Holocene 21: 517–526. 10.1177/0959683610385717
  • McGlone MS, Mildenhall DC, Pole MS 1996. History and paleoecology of New Zealand Nothofagus forests. In: Veblen TT, Hill RS, Read J eds. The ecology and biogeography of Nothofagus forests. New Haven and London, Yale University Press. Pp. 83–125.
  • Meurk CD, Hall GMJ 2006. Options for enhancing forest biodiversity across New Zealand's managed landscapes based on ecosystem modelling and spatial design. New Zealand Journal of Ecology 30: 131–146.
  • Molloy BPJ, de Lange PJ, Clarkson BD 1999. Coprosma pedicellata (Rubiaceae), a new species from New Zealand. New Zealand Journal of Botany 37: 383–397. 10.1080/0028825X.1999.9512643
  • Morgan-Richards M, Smissen RD, Shepherd LD, Wallis GP, Hayward JJ, Chan C et al. 2009. A review of genetic analyses of hybridisation in New Zealand. Journal of the Royal Society of New Zealand 39: 15–34. 10.1080/03014220909510561
  • Nei M 1972. Genetic distance between populations. American Naturalist 106: 283–291. 10.1086/282771
  • Ogden J 1989. On the coenospecies concept and tree migrations during the oscillations of the Pleistocene climate. Journal of the Royal Society of New Zealand 19: 249–262. 10.1080/03036758.1989.10427180
  • Poole AL 1951. Hybrid southern beeches. New Zealand Journal of Forestry 6: 144–145.
  • Poole AL 1958. Studies of New Zealand Nothofagus species III—the entire-leaved species. Transactions of the Royal Society of New Zealand 85: 551–564.
  • Premoli AC, Mathiasen P, Acosta MC, Ramos VA. 2012. Phylogeographically concordant chloroplast DNA divergence in sympatric Nothofagus s.s. How deep can it be? New Phytologist 193: 261–275. 10.1111/j.1469-8137.2011.03861.x
  • Pritchard JK, Stephens M, Donnelly P 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945–959.
  • Quiroga P, Russel RV, Premoli AC 2005. Evidencia morfológica e isoenzimática de hibridación natural entre Nothofagus antarctica y N. pumilio en el noroeste patagónico (Morphological and isozyme evidence of natural hybridization between Nothofagus antarctica and N. pumilio in northwestern Patagonia). Bosque 26: 25–32. 10.4067/S0717-92002005000200004
  • Rieseberg LH, Church SA, Morjan CL 2004. Integration of populations and differentiation of species. New Phytologist 161: 59–69. 10.1046/j.1469-8137.2003.00933.x
  • Sauquet HE, Ho SYW, Gandolfo MA, Jordan GJ, Wilf P, Cantrill DJ et al. 2012. Testing the impact of calibration on molecular divergence times using a fossil-rich group: the case of Nothofagus (Fagales). Systematic Biology 61: 289–313. 10.1093/sysbio/syr116
  • Setoguchi H, Ono M, Doi Y, Koyama H, Tsuda M 1997. Molecular phylogeny of Nothofagus (Nothofagaceae) based on the atpB-rbcL intergenic spacer of the chloroplast DNA. Journal of Plant Research 110: 469–484. 10.1007/BF02506808
  • Smissen RD, Breitwieser I, Ward JM 2006. Genetic diversity in the New Zealand endemic species Helichrysum lanceolatum (Asteraceae: Gnaphalieae). New Zealand Journal of Botany 44: 237–247. 10.1080/0028825X.2006.9513021
  • Smissen RD, Heenan PB, Houliston G 2008. Genetic and morphological evidence for localised interspecific gene flow in Phormium (Hemerocallidaceae). New Zealand Journal of Botany 46: 287–297. 10.1080/00288250809509767
  • Smissen RD, Morse CW, Prada D, Ramón-Laca A, Richardson SJ 2012. Characterisation of seven polymorphic microsatellites for Nothofagus subgenus Fuscospora from New Zealand. New Zealand Journal of Botany 50: 227–231. 10.1080/0028825X.2012.662903
  • van Steenis CGGJ 1953. Results of the Archbold expeditions Papuan Nothofagus. Journal of the Arnold Arboretum 34: 301–374.
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731–2739. 10.1093/molbev/msr121
  • The Angiosperm Phylogeny Group 1998. An ordinal classification for the families of flowering plants. Annals of the Missouri Botanical Garden 85: 531–553. 10.2307/2992015
  • Thomsen TH 2002. Biogeography of Nothofagus subgenus Fuscospora in the South Island of New Zealand inferred from chloroplast DNA. Unpublished MSc thesis. Christchurch, University of Canterbury. 123 p.
  • Vergara R, Gitzendanner MA, Soltis DE, Soltis PS 2014. Population genetic structure, genetic diversity, and natural history of the South American species of Nothofagus subgenus Lophozonia (Nothofagaceae) inferred from nuclear microsatellite data. Ecology and Evolution 4: 2450–2471. 10.1002/ece3.1108
  • Wardle JA 1984. The New Zealand beeches: ecology, utilisation and management. Wellington, New Zealand Forest Service. 447 p.
  • Wardle P 1963. Evolution and distribution of the New Zealand flora, as affected by quaternary climates. New Zealand Journal of Botany 1: 3–17. 10.1080/0028825X.1963.10429318
  • Wardle P, Harris W, Buxton RP 1988. Effects of glacial climates on floristic distribution in New Zealand 2. The role of long-distance hybridisation in disjunct distributions. New Zealand Journal of Botany 26: 557–564. 10.1080/0028825X.1988.10410661
  • Wilcox MD, Ledgard NJ 1983. Provenance variation in the New Zealand species of Nothofagus. New Zealand Journal of Ecology 6: 19–31.
  • Worth JP, Jordan GJ, McKinnon GE, Vaillancourt RE 2009. The major Australian cool temperate rainforest tree Nothofagus cunninghamii withstood Pleistocene glacial aridity within multiple regions: evidence from the chloroplast. New Phytologist 182: 519–532. 10.1111/j.1469-8137.2008.02761.x

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