444
Views
7
CrossRef citations to date
0
Altmetric
Original Papers: Soil Biology

Phylogenetic and physiological characterization of indigenous azospirillum isolates in Thailand

, , &
Pages 413-421 | Received 08 Oct 2003, Accepted 26 Jan 2004, Published online: 20 Sep 2011

References

  • Baldani , VLD and Döbereiner , J . 1980 . Host-plant specificity in the infection of cereals with Azospirillum spp . Soil Biol. Biochem. , 12 : 433 – 439 .
  • Bashan , Y and Holguin , G . 1997 . Azospirillum-plant rclationships: Environmental and physiological advances (1990–1996) . Can. J. Microbiol. , 43 : 103 – 121 .
  • Beyeler , M , Michaux , P , Keel , C and Haas , D . 1997 . “ Effect of enhanced production of indole-3-acetic acid by the biological control agent Pseudomonas fluorescens CHAO on plant growth ” . In Plant Growth-Promoting Rhizobacteria Present Status and Future Prospects , Edited by: Kobayashi , A , Homma , Y , Kodama , F , Kondo , N and Akino , S . 310 – 312 . Paris : OECD .
  • Beijerinck , MW . 1925 . Über ein Spirillum, welches frei en Stickstoff binden kann? . Zentralbl. Bakteriol. , 63 : 353 – 359 .
  • Boddey , RM , Baldani , VLD , Baldani , n and Döbereiner , J . 1986 . Effect of inoculation of Azospirillum spp. on nitrogen accumulation by field-grown wheat . Plant Soil , 95 : 109 – 121 .
  • Cáceres , EAR . 1982 . Improved medium for isolation of Azospirillum spp . Appl. Environ. Microbiol. , 44 : 990 – 991 .
  • Crozier , A , Arruda , P , Jasmim , JM , Monteiro , AM and Sandberg , G . 1988 . Analysis of indole-3-acetic acid and related indoles in culture medium from Azospirillum lipoferum and Azospirillum brasilense . Appl. Environ. Microbiol. , 54 : 2833 – 2837 .
  • Dekhil , SB , Cahill , M , Stackebrandt , E and Sly , LI . 1997 . Transfer of Conglomeromonas largomobilis subsp. largomobilis to the genus Azospirillum as Azospirillum largomobile comb. nov., and elevation of Conglomeromonas largomobilis subsp. parooensis to the new type species of Conglomeromonas, Conglomeromonas parooensis sp. nov . Syst. Appl. Microbiol. , 20 : 72 – 77 .
  • Döbereiner , J . 1980 . “ Forage grasses and grain crops ” . In Methods for Evaluating Biological Nitrogen Fixation , Edited by: Bergersen , FJ . 535 – 536 . Chichester : John Wiley and Sons Ltd. .
  • Döbereiner , J , Marriel , IE and Nery , M . 1976 . Ecological distribution of Spirillum lipoferum Beijerinck . Can. J. Microbiol. , 22 : 1464 – 1473 .
  • Eckert , B , Weber , OB , Kirchhof , G , Halbritter , A , Stoffels , M and Hartmann , A . 2001 . Azospirillum doebereinerae sp. nov., a nitrogen-fixing bacterium associated with the C4-grass Miscanthus . Int. J. Syst. Evol. Microbiol. , 51 : 17 – 26 .
  • EI-Khawas , HM , Ibrahim , IA , Anwar , HM and Hegazi , NA . 1996 . “ In vitro propagation using phytohOtmone produced by associative diazotrophs ” . In Abstracts of the 7th International Symposium on Nitrogen Fixation with Non-legumes , Edited by: Malik , KA , Mirza , MS and Ladha , JK . 67 – 67 . Faisalabad, , Pakistan : Sheikh Ghulam Ali (PVT) Ltd. .
  • Falk , EC , Johnson , JL , Baldani , VLD , Döbereiner , J and Krieg , NR . 1986 . Deoxyribonucleic and ribonucleic acid homology studies of the genera Azospirillum and Conglomeromonas . Int. J. Syst. Bacterial. , 36 : 80 – 95 .
  • Fulchieri , M and Frioni , L . 1994 . Azospirillum inoculation on maize (Zea mays): Effect on yield in a field experiment in central Argentina . Soil Biol. Biochem. , 26 : 921 – 923 .
  • Glick , BR . 1995 . The enhancement of plant growth by free-living bacteria . Can. J. Microbiol. , 41 : 109 – 117 .
  • Glickmann , E and Dessaux , Y . 1995 . A critical examination of the specificity of the Salkowski reagent for indolic compounds produced by phytopathogenic bacteria . Appl. Environ. Microbiol. , 61 : 793 – 796 .
  • Gunarto , L , Adachi , K and Senboku , T . 1999 . Isolation and selection of indigenous Azospirillum spp. from a subtropical island, and effect of inoculation on growth of lowland rice under several levels of N application . Biol. Fertil. Soils , 28 : 129 – 135 .
  • Haahtela , K , Wartiovaara , T , Sundman , V and Skujins , J . 1981 . Root-associated N2 fixation (acetylene reduction) by Enterobacteriaceae and Azospirillum strains in cold-climate spodosols . Appl. Environ. Microbiol. , 41 : 203 – 206 .
  • Hartmann , A , Singh , M and Klingmilller , W . 1983 . Isolation and characterization of Azospirillum mutants excreting high amounts of indoleacetic acid . Can. J. Microbiol. , 29 : 916 – 923 .
  • Holguin , G , Patten , CL and Glick , BR . 1999 . Genetics and molecular biology of Azospirillum . Biol. Fertil. Soils , 29 : 10 – 23 .
  • Khammas , KM , Ageron , E , Grimont , PAD and Kaiser , P . 1991 . Azospirillum irakense sp. nov., a nitrogen-fixing bacterium associated with rice roots and rhizosphere soil . Int. J. Syst. Bacteriol. , 41 : 580 – 581 .
  • Kirchhof , G , Reis , VM , Baldani , JI , Eckert , B , Döbereiner , J and Hartmann , A . 1997 . Occurrence, physiological and molecular analysis of endophytic diazo trophic bacteria in gramineous energy plants . Plant Soil , 194 : 45 – 55 .
  • Kumar , S , Tamura , K , Jakobsen , IB and Nei , M . 2001 . MEGA2: Molecular Evolutionary Genetics Analysis software . Biolnformatics , 17 : 1244 – 1245 .
  • Magalhães , FM , Baldani , JI , Souto , SM , Kuykendall , JR and D6bereiner , J . 1984 . A new acid-tolerant Azospirillum species . Int. J. Syst. Bacteriol. , 34 : 355 – 357 .
  • Mascarua-esparza , MA , Villa-Gonzalez , R and Caballero-Mellado , J . 1988 . Acetylene reduction and indoleacetic acid production by Azospirillum isolates from Cactaceous plants . Plant Soil , 106 : 91 – 95 .
  • Murty , MG and Ladha , JK . 1988 . Influence of Azospirillum inoculation on the mineral uptake and growth of rice under hydroponic conditions . Plant Soil , 108 : 281 – 285 .
  • Nosko , P , Bliss , LC and Cook , FD . 1994 . The association of freeliving-fixing bacteria with the root of High Arctic graminoids . Arct. Alp. Res. , 26 : 180 – 186 .
  • Ochiai , H and Kaku , H . 1999 . Genetic relationships among Xanthomonas species and Pathovors based on RFLP analyses of PCR-amplified 16S, 23S rDNA and rDNA internal transcribed spacer . Ann. Phytopathol. Soc. Jpn. , 65 : 437 – 446 .
  • Okon , Y and Kapulnik , Y . 1986 . Development and function of Azospirillum-inoculated roots . Plant Soil , 90 : 3 – 6 .
  • Patriquin , DG and Döbereiner , J . 1978 . Light microscopy observations of tetrazolium-reducing bacteria in the endorhizosphere of maize and other grasses in Brazil . Can. J. Microbiol. , 24 : 734 – 742 .
  • Pearson , WR and Lipman , DJ . 1988 . Imported tools for biological sequence comparison- . Proc. Natl. Acad. Sci. U.S.A. , 85 : 2444 – 2448 .
  • Reinhold , B , Hurek , T , Fendrik , I , Pot , B , Gillis , M , Kerstars , K , Thielemans , S and De Ley , J . 1987 . Azospirillum halopraeferens sp. nov., a nitrogen-fixing organism associated with roots of Kallar grass (Leptochloa fusca (L.) Kunth) . Int. J. Syst. Bacteriol. , 37 : 43 – 51 .
  • Reynders , L and Vlassak , K . 1979 . Conversion of tryptophan to indoleacetic acid by Azospirillum brasilense . Soil Biol. Biochem. , 11 : 547 – 548 .
  • Saitou , N and Nei , M . 1987 . The neighbor-joining method: A new method for reconstructing phylogenetic trees . Mol. Biol. Evol. , 4 : 406 – 425 .
  • Salamone , IEG , Nelson , L and Brown , G . 1997 . “ Plant growth promotion by Pseudomonas PGPR cytokinin producers ” . In Proceeding of the Fourth International Workshop on Plant Growth-Promoting Rhizobacteria Edited by: Ogoshi , A , Kobayashi , K , Homma , Y , Kodama , F , Kondo , N and Akino , S . 316 – 319 . Sapporo
  • Sambrook , J and Russell , DW . 2001 . Molecular Cloning: A Laboratory Manual , New York : Cold Spring Harbor Laboratory Press .
  • Schmidt , EL , Zidwick , MJ and Abebe , HM . 1986 . Bradyrhizobium japonicum serocluster 123 and diversity among member isolates . Appl. Environ. Microbiol. , 51 : 1212 – 1215 .
  • Skerman , VBD , Sly , LI and Williamson , M . 1983 . Conglomeromonas largomobilis gen. Nov., sp. nov., a sodium-sensitive, mixed-flagellated organism from fresh water . Int. J. Syst. Bacteriol. , 33 : 300 – 308 .
  • Steenhoudt , A and Vanderleyden , J . 2000 . Azospirillum, a free-living nitrogen-fixing bacterium closely associated with grasses: genetic, biochemical and ecological aspects . FEMS Microbiol Rev. , 24 : 487 – 506 .
  • TarrJJ , Krieg , NR and Dobereiner , J . 1979 . A taxonomic study of the Spirillum lipaferum group, with descriptions of a new genus, Azospirillum gen. nov. and two species, Azospirillum lipaferum (Beijerinck) comb. nov. and Azospirilfum brasilense sp. nov . Int. J. Syst. Bacterial. , 29 : 79 – 80 .
  • Thompson , JD , Gibson , TJ , Plewniak , F , Jeanmougin , F and Higgins , DG . 1997 . The clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools . Nucl. Acids Res. , 25 : 4876 – 4882 .
  • Thompson , JD , Higgins , DG and Gibson , TJ . 1994 . Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice . Nuc!. Acids Res. , 22 : 4673 – 4680 .
  • Wollum , AG II . 1982 . “ Cultural methods for soil microorganisms ” . In Methods of Soil Analysis Part 2, Agronomy 9 , Edited by: Page , Al . 791 – 796 . WI : American Society of Agronomy, Inc. and Soil Science Society of America, Inc. .
  • Xia , Y , Embley , TM and O'Donnell , AG . 1994 . Phylogenetic analysis of Azospirillum by direct sequencing of PCR-amplified 16S rDNA . Syst. Appl. Microbial. , 17 : 197 – 201 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.