Analysis of reflectance spectra of tropical seagrass species and their value for mapping using multispectral satellite images

References

• Aziizah, N. N., V. P. Siregar, and S. B. Agus. 2015. “Analisis Reflektansi Spektral Lamun Menggunakan Spektrometer Di Pulau Tunda Serang, Banten.” Jurnal Teknologi Perikanan Dan Kelautan 6 (2): 199–208. doi:10.24319/jtpk.6.199-208.
   Google Scholar
• Aziizah, N. N., V. P. Siregar, and S. B. Agus. 2016. Analisis Reflektansi Spektral Lamun Dari Hasil Pengukuran in Situ Menggunakan Spektrometer Dan Citra Satelit Worldview-2 Di Pulau Tunda Serang, Banten. Bogor: Institut Pertanian Bogor.
   Google Scholar
• Bierwirth, P. N., T. J. Lee, and R. V. Burne. 1993. “Shallow Sea-Floor Reflectance and Water Depth Derived by Unmixing Multispectral Imagery.” Photogrammetric Engineering and Remote Sensing 59 (3): 331–338.
   Web of Science ®Google Scholar
• Björk, M., F. Short, E. Mcleod, and S. Beer. 2008. Managing Seagrasses for Resilience to Climate Change. Gland, Switzerland: IUCN.
   Google Scholar
• Clark, R. N., T. V. King, and N. S. Gorelick. 1987. “Automatic Continuum Analysis of Reflectance Spectra.” In Proceedings, Third AIS Workshop. JPL Publication 87-30, 138–142. Pasadena, California: Jet Propulsion Laboratory.
   Google Scholar
• Congalton, R. G., and K. Green. 2008. Assessing the Accuracy of Remotely Sensed Data: Principles and Practices. Boca Raton, FL: CRC Press.
   Google Scholar
• Dekker, A., V. Brando, J. Anstee, S. K. Fyfe, T. Malthus, and E. Karpouzli. 2006. “Remote Sensing of Seagrass Systems: Use of Spaceborne and Airborne Systems.” In Seagrasses: Biology, Ecology and Conservation, edited by A. Larkum, R. Orth, C. Duarte, and C. Duarte, 347−359. Dordrecht: Springer.
   Google Scholar
• Dekker, A. G., V. E. Brando, and J. M. Anstee. 2005. “Retrospective Seagrass Change Detection in a Shallow Coastal Tidal Australian Lake.” Remote Sensing of Environment 97: 415–433. doi:10.1016/j.rse.2005.02.017.
   Web of Science ®Google Scholar
• Du, H., C. I. Chang, H. Ren, F. M. D’Amico, and J. O. Jensen. 2004. “New Hyperspectral Discrimination Measure for Spectral Characterization.” Optical Engineering 43 (8): 1777–1786. doi:10.1117/1.1766301.
   Web of Science ®Google Scholar
• Eugenio, F., J. Marcello, and J. Martin. 2015. “High-Resolution Maps of Bathymetry and Benthic Habitats in Shallow-Water Environments Using Multispectral Remote Sensing Imagery.” IEEE Transactions on Geoscience and Remote Sensing 53 (7): 3539–3549. doi:10.1109/TGRS.2014.2377300.
   Web of Science ®Google Scholar
• Fyfe, S. K. 2003. “Spatial and Temporal Variation in Spectral Reflectance: Are Seagrass Species Spectrally Distinct?” Limnology and Oceanography 48 (1, part 2): 464−479. doi:10.4319/lo.2003.48.1_part_2.0464.
   Web of Science ®Google Scholar
• Green, E. P., P. J. Mumby, A. J. Edwards, and C. D. Clark. 2000. Remote Sensing Handbook for Tropical Coastal Management. Coastal Management Sourcebooks 3. (A. J. Edwards, Ed.). Paris: UNES.
   Google Scholar
• Gullstrom, M., L. D. Lyimo, M. Dahl, G. S. Samuelsson, M. Eggertsen, E. Anderberg, … M. Bjork. 2017.  Blue Carbon Storage in Tropical Seagrass Meadows Relates to Carbonate Stock Dynamics, Plant–Sediment Processes, and Landscape Context: Insights from the Western Indian Ocean. Ecosystems, 21(3), 551-566. doi:10.1007/s10021-017-0170-8
   Google Scholar
• Hedley, J., B. Russell, K. Randolph, and H. Dierssen. 2016. “A Physics-Based Method for the Remote Sensing of Seagrasses.” Remote Sensing of Environment 174: 134–147. doi:10.1016/j.rse.2015.12.001.
   Web of Science ®Google Scholar
• Hedley, J. D., A. R. Harborne, and P. J. Mumby. 2005. “Simple and Robust Removal of Sunglint for Mapping Shallow-Water Benthos.” International Journal of Remote Sensing 26 (10): 2107–2112. doi:10.1080/01431160500034086.
   Web of Science ®Google Scholar
• Hochberg, E. J., and M. J. Atkinson. 2000. “Spectral Discrimination of Coral Reef Benthic Communities.” Coral Reefs 19: 164–171. doi:10.1007/s003380000087.
   Web of Science ®Google Scholar
• Hossain, M. S., J. S. Bujang, M. H. Zakaria, and M. Hashim. 2015. “The Application of Remote Sensing to Seagrass Ecosystems: An Overview and Future Research Prospects.” International Journal of Remote Sensing 36 (1): 61–113. doi:10.1080/01431161.2014.990649.
   Web of Science ®Google Scholar
• Kirkman, H. 1996. “Baseline and Monitoring Methods for Seagrass Meadows.” Journal of Environmental Management 47: 191–201. doi:10.1006/jema.1996.0045.
   Web of Science ®Google Scholar
• Knudby, A., and L. Nordlund. 2011. “Remote Sensing of Seagrass in a Patchy Multi-Species Environment.” International Journal of Remote Sensing 32 (8): 2227–2244. doi:10.1080/01431161003692057.
   Web of Science ®Google Scholar
• Koedsin, W., W. Intararuang, R. J. Ritchie, and A. Huete. 2016. “An Integrated Field and Remote Sensing Method for Mapping Seagrass Species, Cover, and Biomass in Southern Thailand.” Remote Sensing 8 (292). doi:10.3390/rs8040292.
   Web of Science ®Google Scholar
• Kruse, F., A. B. Lefkoff, J. B, K. B. Heidebrecht, A. T. Shapiro, P. J. Barloon, and A. F. Goetz. 1993. “The Spectral Image Processing System (SIPS) - Interactive Visualization and Analysis of Imaging Spectrometer Data.” Remote Sensing of the Environment 44: 145–163. doi:10.1016/0034-4257(93)90013-N.
   Web of Science ®Google Scholar
• Kutser, T., E. Vahtmae, and L. Mersamaa. 2006. “Spectral Library of Macroalgae and Benthic Substrates in Estonian Coastal Waters.” Proceedings of the Estonian Academy of Sciences Biology and Ecology 55 (4): 329–340.
   Google Scholar
• Lyons, M., S. Phinn, and C. Roelfsema. 2011. “Integrating Quickbird Multi-Spectral Satellite and Field Data: Mapping Bathymetry, Seagrass Cover, Seagrass Species and Change in Moreton Bay, Australia in 2004 and 2007.” Remote Sensing 3: 42–64. doi:10.3390/rs3010042.
   Web of Science ®Google Scholar
• Lyzenga, D. R. 1978. “Passive Remote-Sensing Techniques for Mapping Water Depth and Bottom Features.” Applied Optics 17: 379–383. doi:10.1364/AO.17.000379.
   PubMed Web of Science ®Google Scholar
• Mishra, D., S. Narumalani, D. Rundquist, and M. Lawson. 2006. “Benthic Habitat Mapping in Tropical Marine Environments Using QuickBird Multispectral Data.” Photogrammetric Engineering & Remote Sensing 72 (9): 1037–1048. doi:10.14358/PERS.72.9.1037.
   Web of Science ®Google Scholar
• Mobley, C. D. 1994. Light and Water: Radiative Transfer in Natural Waters. Sand Diego: Academic Press.
   Google Scholar
• Mumby, P. J., and A. R. Harborne. 1999. “Development of a Systematic Classification Scheme of Marine Habitats to Facilitate Regional Management and Mapping of Caribbean Coral Reefs.” Biology Conservation 88: 155–163. doi:10.1016/S0006-3207(98)00108-6.
   Web of Science ®Google Scholar
• Nababan, M. G., Munasik, I. Yulianto, T. Kartawijaya, R. Prasetia, R. L. Ardiwijaya, … Y. Syaifudin. 2010. Status Ekosistem Di Taman Nasional Karimunjawa: 2010. Bogor: Wildlife Conservation Society-Indonesia Program.
   Google Scholar
• Nordlund, L. M., E. W. Koch, E. B. Barbier, and J. C. Creed. 2016. “Seagrass Ecosystem Services and Their Variability across Genera and Geographical Regions.” PLoS ONE 11 (10): e0163091. doi:10.1371/journal.pone.0163091.
   PubMed Web of Science ®Google Scholar
• Penuelas, J., J. A. Gamon, K. L. Griffin, and C. B. Field. 1993. “Assessing Community Type, Plant Biomass, Pigment Composition, and Photosynthetic Efficiency of Aquatic Vegetation from Spectral Reflectance.” Remote Sensing of Environment 46 (2): 110–118. doi:10.1016/0034-4257(93)90088-F.
   Web of Science ®Google Scholar
• Phinn, S. R., C. M. Roelfsema, V. Brando, and J. Anstee. 2008. “Mapping Seagrass Species, Cover and Biomass in Shallow Waters: An Assessment of Satellite Multi-Spectral and Airborne Hyper-Spectral Imaging Systems in Moreton Bay (Australia).” Remote Sensing of Environment 112: 3413–3425. doi:10.1016/j.rse.2007.09.017.
   Web of Science ®Google Scholar
• Pontius, R. G., Jr, and M. Millones. 2011. “Death to Kappa: Birth of Quantity Disagreement and Allocation Disagreement for Accuracy Assessment.” International Journal of Remote Sensing 32 (15): 4407–4429. doi:10.1080/01431161.2011.552923.
   Web of Science ®Google Scholar
• Prabowo, A. 2016. Statistik Balai Taman Nasional Karimunjawa Tahun 2016. Semarang: Balai Taman Nasional Karimunjawa tahun.
   Google Scholar
• Purkis, S. J., and R. Pasterkamp. 2004. “Integrating in Situ Reef-Top Reflectance Spectra with Landsat TM Imagery to Aid Shallow-Tropical Benthic Habitat Mapping.” Coral Reefs 23: 5–20. doi:10.1007/s00338-003-0351-0.
   Web of Science ®Google Scholar
• Richardson, A. D., S. P. Duigan, and G. P. Berlyn. 2002. “An Evaluation of Noninvasive Methods to Estimate Foliar Chlorophyll Content.” New Phytologist 153: 185–194. doi:10.1046/j.0028-646X.2001.00289.x.
   Web of Science ®Google Scholar
• Roelfsema, C. M., M. Lyons, E. M. Kovacs, P. Maxwell, M. I. Saunders, J. Samper-Villarreal, and S. R. Phinn. 2014. “Multi-Temporal Mapping of Seagrass Cover, Species and Biomass: A Semi-Automated Object Based Image Analysis Approach.” Remote Sensing of Environment 150: 172–187. doi:10.1016/j.rse.2014.05.001.
   Web of Science ®Google Scholar
• Roelfsema, C. M., and S. R. Phinn. 2009. A Manual for Conducting Georeferenced Photo Transects Surveys to Assess the Benthos of Coral Reef and Seagrass Habitats. Queensland: Centre for Remote Sensing & Spatial Information Science, School of Geography, Planning & Environmental Management, University of Queensland.
   Google Scholar
• Sims, D. A., and J. A. Gamon. 2002. “Relationships between Leaf Pigment Content and Spectral Reflectance across a Wide Range of Species, Leaf Structures and Developmental Stages.” Remote Sensing of Environment 81 (2–3): 337–354. doi:10.1016/S0034-4257(02)00010-X.
   Web of Science ®Google Scholar
• Slaton, M. R., J. E. R. Hunt, and W. K. Smith. 2001. “Estimating Near-Infrared Leaf Reflectance for Leaf Structural Characteristics.” American Journal of Botany 88: 278–284.
   PubMed Web of Science ®Google Scholar
• Stumpf, R. P., K. Holderied., and M. Sinclair. 2003. “Determination of Water Depth with High-Resolution Satellite Imagery over Variable Bottom Types.” Limnol-Oceanography 48: 547–556. doi:10.4319/lo.2003.48.1_part_2.0547.
   Web of Science ®Google Scholar
• Thorhaug, A., A. D. Richardson, and G. P. Berlyn. 2007. “Spectral Reflectance of the Seagrasses: Thalassia testudinum,Halodule Wrightii, Syringodium Filiforme and Five Marine Algae.” International Journal of Remote Sensing 28 (7): 1487–1501. doi:10.1080/01431160600954662.
   Web of Science ®Google Scholar
• Tol, S. J., R. G. Coles, and B. C. Congdon. 2016. “Dugong Dugon Feeding in Tropical Australian Seagrass Meadows: Implications for Conservation Planning.” PeerJ 4: e2194. doi:10.7717/peerj.2194.
   PubMed Web of Science ®Google Scholar
• Topouzelis, K., S. C. Spondylidis, A. Papakonstantinou, and N. Soulakellis (2016). “The Use of Sentinel-2 Imagery for Seagrass Mapping: Kalloni Gulf (Lesvos Island, Greece) Case Study.” Proceedings SPIE 9688, Fourth International Conference on Remote Sensing and Geoinformation of the Environment (RSCy2016), 96881F. SPIE. doi:10.1117/12.2242887
   Google Scholar
• Traganos, D., and P. Reinartz. 2018. “Mapping Mediterranean Seagrasses with Sentinel-2 Imagery.” Marine Pollution Bulletin 134: 197–209. doi:10.1016/j.marpolbul.2017.06.075.
   PubMed Web of Science ®Google Scholar
• Updike, T., and C. Comp. 2010. Radiometric Use of WorldView-2 Imagery. Longmont, Colorado: DigitalGlobe®.
   Google Scholar
• Waycott, M., C. M. Duarte, T. J. Carruthers, R. J. Orth, W. C. Dennison, S. Olyarnik, … S. L. Williams (2009). Accelerating loss of seagrasses across the globe threatens coastal ecosystems. PNAS, 106(30), 12377-12381. doi:10.1073/pnas.0905620106.
   Google Scholar
• Wicaksono, P. 2017. “Karakterisasi Respon Spektral Spesies Lamun Enhalus Acoroides Dan Cymodocea Rotundata Di Pulau Karimunjawa.” Globe 19 (1): 1–10.
   Google Scholar
• Wicaksono, P., and M. Hafizt. 2013. “Mapping Seagrass from Space: Addressing the Complexity of Seagrass LAI Mapping.” European Journal of Remote Sensing 46: 18–39. doi:10.5721/EuJRS20134602.
   Web of Science ®Google Scholar
• Wicaksono, P., and M. Kamal (2017). “Spectral Response of Healthy and Damaged Leaves of Tropical Seagrass Enhalus Acoroides, Thalassia Hemprichii, and Cymodocea Rotundata.” Proceedings SPIE 10421, Remote Sensing for Agriculture, Ecosystems, and Hydrology XIX, 104210L. Warsaw: SPIE.
   Google Scholar
• Wicaksono, P., and W. Lazuardi. 2018. “Assessment of PlanetScope Images for Benthic Habitat and Seagrass Species Mapping in a Complex Optically-Shallow Water Environment.” International Journal of Remote Sensing 39 (17): 5739–5765. doi:10.1080/01431161.2018.1506951.
   Web of Science ®Google Scholar