Potential for Microscale Bacterial Fe Redox Cycling at the Aerobic-Anaerobic Interface

REFERENCES

• Arnold , RG , Hoffmann , MR , DiChristina , TJ and Picardal , FW. 1990 . Regulation of dissimilatory Fe(III) reduction activity in Shewanella putrefaciens . Appl Environ Microbiol , 56 : 2811 – 2817 .
   PubMed Web of Science ®Google Scholar
• Benz , M , Brune , A and Schink , B . 1998 . Anaerobic and aerobic oxidation of ferrous iron at neutral pH by chemoheterotrophic nitrate-reducing bacteria . Arch Microbiol , 169 : 159 – 165 .
   PubMed Web of Science ®Google Scholar
• Blake , R and Johnson , DB. 2000 . “ Phylogenetic and biochemical diversity among acidophilic bacteria that respire on iron ” . In Environmental Metal-Microbe Interactions , Edited by: Lovley , DR . pp. 53 – 78 . Washington, DC : ASM Press . In:
   Google Scholar
• Brendel , PJ and Luther , GW. 1995 . Development of a gold amalgam voltammetric microelectrode for the determination of dissolved Fe, Mn, O-2, and S(-II) in porewaters of marine and freshwater sediments . Environ Sci Technol , 29 : 751 – 761 .
   PubMed Web of Science ®Google Scholar
• Brock , TD and Gustafson , J . 1972 . Sulfolobus: a new genus of sulfur-oxidizing bacteria living at low pH and high temperature . Arch Microbiol , 84 : 54 – 68 .
   Web of Science ®Google Scholar
• Caccavo , F , Blakemore , RP and Lovley , DR. 1992 . A hydrogen-oxidizing, Fe(III)-reducing microorganism from the Great Bay estuary, New Hampshire . Appl Environ Microbiol , 58 : 3211 – 3216 .
   PubMed Web of Science ®Google Scholar
• Christensen , TH , Kjeldsen , P , Albrechtsen , HJ , Heron , G , Nielsen , PH , Bjerg , PL and Holm , PE. 1994 . Attenuation of landfill leachate polluntants in aquifers . Crit Rev Environ Sci Technol , 24 : 119 – 202 .
   Web of Science ®Google Scholar
• Cornell , RM and Schwertmann , U. 1996 . The Iron Oxides , New York : VCH .
   Google Scholar
• Davison , W . 1993 . Iron and manganese in lakes . Earth Sci Rev , 34 : 119 – 163 .
   Web of Science ®Google Scholar
• Davison , W and Seed , G . 1983 . The kinetics of the oxidation of ferrous iron in synthetic and natural waters . Geochim Cosmochim Acta , 47 : 67 – 79 .
   Web of Science ®Google Scholar
• DiChristina , TJ and Delong , EF. 1993 . Design and application of rRNA-targeted oligonucleotide probes for the dissimilatory iron- and manganese-reducing bacterium Shewanella putrefaciens . Appl Environ Microbiol , 59 : 4152 – 4160 .
   PubMed Web of Science ®Google Scholar
• Edwards , KJ , Bond , PL , Gihring , TM and Banfield , JF. 2000 . An archaeal iron-oxidizing extreme acidophile important in acid mine drainage . Science , 287 : 1701 – 1876 .
   Web of Science ®Google Scholar
• Edwards , KJ , Rogers , DR , Wirsen , CO and McCollom , TM. 2003 . Isolation and characterization of novel psychrophilic, neutrophilic, Fe-oxidizing chemolithoautotrophic α - and γ -Proteobacteria from the deep sea . Appl Environ Microbiol , 69 : 2906 – 2913 .
   PubMed Web of Science ®Google Scholar
• Ehrenreich , A and Widdel , F . 1994 . Anaerobic oxidation of ferrous iron by purple bacteria, a new type of phototrophic metabolism . Appl Environ Microbiol , 60 : 4517 – 4526 .
   PubMed Web of Science ®Google Scholar
• Ehrlich , HL. 1995 . Geomicrobiology , New York : Marcel Dekker .
   Google Scholar
• Emerson , D. 2000 . “ Microbial oxidation of Fe(II) and Mn(II) at circumneutral pH ” . In Environmental Metal-Microbe Interactions , Edited by: Lovley , DR . pp. 31 – 52 . Washington, DC : ASM Press . In:
   Google Scholar
• Emerson , D and Moyer , C . 1997 . Isolation and characterization of novel lithotrophic iron-oxidizing bacteria that grow at circumneutral pH . Appl Environ Microbiol , 63 : 4784 – 4792 .
   PubMed Web of Science ®Google Scholar
• Emerson , D and Moyer , C . 2002 . Neutrophilic Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition . Appl Environ Microbiol , 68 : 3085 – 3093 .
   PubMed Web of Science ®Google Scholar
• Emerson , D and Revsbech , NP . 1994a . Investigation of an iron-oxidizing microbial mat community located near Aarhus, Denmark: Field studies . Appl Environ Microbiol , 60 : 4022 – 4031 .
   PubMed Web of Science ®Google Scholar
• Emerson , D and Revsbech , NP . 1994b . Investigation of an iron-oxidizing microbial mat community located near Aarhus, Denmark: Laboratory studies . Appl Environ Microbiol , 60 : 4032 – 4038 .
   PubMed Web of Science ®Google Scholar
• Emerson , D , Weiss , JV and Megonigal , JP. 1999 . Iron-oxidizing bacteria are associated with ferric hydroxide precipitates (Fe-plaque) on the roots of wetland plants . Appl Environ Microbiol , 65 : 2758 – 2761 .
   PubMed Web of Science ®Google Scholar
• Fredrickson , JK , Zachara , JM , Kennedy , DW , Dong , H , Onstott , TC , Hinman , NW and Li , S . 1998 . Biogenic iron mineralization accompanying the dissimilatory reduction of hydrous ferric oxide by a groundwater bacterium . Geochim Cosmochim Acta , 62 : 3239 – 3257 .
   Web of Science ®Google Scholar
• Frenzel , P , Bosse , U and Janssen , PH. 1999 . Rice roots and methanogenesis in a paddy soil: ferric iron as an alternative electron acceptor in the rooted soil . Soil Biol Biochem , 31 : 421 – 430 .
   Web of Science ®Google Scholar
• Ghiorse , WC. 1984 . Biology of iron- and manganese-depositing bacteria . Annu Rev Microbiol , 38 : 515 – 550 .
   PubMed Web of Science ®Google Scholar
• Harvey , PI and Crundwell , FK. 1997 . Growth of Thiobacillus ferrooxidans: a novel experimental design for batch growth and bacterial leaching studies . Appl Environ Microbiol , 63 : 2586 – 2592 .
   PubMed Web of Science ®Google Scholar
• Huettel , M , Ziebis , W , Forster , S and Luther , GW. 1998 . Advective transport affecting metal and nutrient distributions and interfacial fluxes in permeable sediments . Geochim Cosmochim Acta , 62 : 613 – 631 .
   Web of Science ®Google Scholar
• Hunter , KS , Wang , Y and VanCappellen , P . 1998 . Kinetic modeling of microbially-driven redox chemistry of subsurface environments: coupling transport, microbial metabolism and geochemistry . J Hydrol , 209 : 53 – 80 .
   Web of Science ®Google Scholar
• Jahnke , R . 1985 . A model for microenvironments in deep-sea sediments, formation and effects on porewater profiles . Limnol Oceanogr , 30 : 956 – 965 .
   Web of Science ®Google Scholar
• Johnson , DB. 1998 . Biodiversity and ecology of acidophilic microorganisms . FEMS Microbiol Ecol , 27 : 307 – 317 .
   Web of Science ®Google Scholar
• Johnson , DB , McGinness , S and Ghauri , MA. 1993 . Biogeochemical cycling of iron and sulfur in leaching environments . FEMS Microbiol Rev , 11 : 63 – 70 .
   Web of Science ®Google Scholar
• Jones , JG. 1983 . A note on the isolation and enumeration of bacteria which deposit and reduce ferric iron . J Appl Bact , 54 : 305 – 310 .
   Google Scholar
• Jorgensen , BB. 1977 . Bacterial sulfate reduction within reduced microniches of oxidized marine sediments . Mar Biol , 41 : 7 – 17 .
   Web of Science ®Google Scholar
• Jorgensen , BB. 1989 . “ Biogeochemistry of chemoautotrophic bacteria ” . In Biochemistry of Autotrophic Bacteria , Edited by: Schlegel , HG and Bowien , B . pp. 117 – 146 . Madison, WI : Science Tech Publishers . In:
   Google Scholar
• Jorgensen , BB and Revsbech , NP. 1983 . Colorless sulfur bacteria, Beggiatoa spp. and Thiovulum spp., in O2 and H2S microgradients . Appl Environ Microbiol , 45 : 1261 – 1270 .
   PubMed Web of Science ®Google Scholar
• Kucera , S and Wolfe , RS. 1957 . A selective enrichment method for Gallionella ferruginea . J Bacteriol , 74 : 344 – 349 .
   PubMed Web of Science ®Google Scholar
• Kusel , K and Dorsch , T. 2000 . Effect of supplemental electron donors on the microbial reduction of Fe(III), sulfate, and CO2 in coal mining-impacted freshwater lake sediments . Microb Ecol , 40 : 238 – 249 .
   PubMed Web of Science ®Google Scholar
• Kusel , K , Dorsch , T , Acker , G and Stackebrandt , E. 1999 . Microbial reduction of Fe(III) in acidic sediments: isolation of Acidiphilium cryptum JF-5 capable of coupling the reduction of Fe(III) to the oxidation of glucose . Appl Environ Microbiol , 65 : 3633 – 3640 .
   PubMed Web of Science ®Google Scholar
• Lovley , DR. 1991 . Dissimilatory Fe(III) and Mn(IV) reduction . Microbiol Rev , 55 : 259 – 287 .
   PubMedGoogle Scholar
• Lovley , DR. 2000 . “ Fe(III) and Mn(IV) reduction ” . In Environmental Metal-Microbe Interactions , Edited by: Lovley , DR . pp. 3 – 30 . Washington, DC : ASM Press . In:
   Google Scholar
• Lovley , DR. 2002 . “ Fe(III)- and Mn(IV)-reducing prokaryotes ” . In The Prokaryotes , Edited by: Dworkin , SFM , Rosenberg , E , Schleifer , KH and Stackebrandt , E. New York : Springer-Verlag . In press
   Google Scholar
• Lovley , DR and Anderson , RT. 2000 . The influence of dissimilatory metal reduction on the fate of organic and metal contaminants in the subsurface . J Hydrol , 8 : 77 – 88 .
   Google Scholar
• Lovley , DR and Phillips , EJP. 1986 . Organic matter mineralization with reduction of ferric iron in anaerobic sediments . Appl Environ Microbiol , 51 : 683 – 689 .
   PubMed Web of Science ®Google Scholar
• Lovley , DR and Phillips , EJP. 1994 . Novel processes for anaerobic sulfate production from elemental sulfur by sulfate-reducing bacteria . Appl Environ Microbiol , 60 : 2394 – 2399 .
   PubMed Web of Science ®Google Scholar
• Luther , GW , Reimers , CE , Nuzzio , DB and Lovalvo , D. 1999 . In situ deployment of voltammetric, potentiometric and amperometric microelectrodes from a ROV to determine O2, Mn, Fe, S(−2) and pH in porewaters . Environ Sci Technol , 33 : 4352 – 4356 .
   Web of Science ®Google Scholar
• Luther , GWI , Kostka , JE , Church , TM , Sulzberger , B and Stumm , W . 1992 . Seasonal iron cycling in the salt-marsh sedimentary environment: the importance of ligand complexes with Fe(II) and Fe(III) in the dissolution of Fe(III) minerals and pyrite, respectively . Mar Chem , 40 : 81 – 103 .
   Web of Science ®Google Scholar
• McCarty , PL . 1971 . “ Energetics and bacterial growth ” . In Organic Compounds in Aquatic Environments , Edited by: Faust , SD and Hunter , JV . pp. 91 – 113 . New York : Marcel Dekker . In:
   Google Scholar
• Millero , FJ , Sotolongo , S and Izaguirre , M . 1987 . The oxidation kinetics of Fe(II) in seawater . Geochim Cosmochim Acta , 51 : 793 – 801 .
   Web of Science ®Google Scholar
• Nelson , DC , Jorgensen , BB and Revsbech , NP. 1986 . Growth pattern and yield of a chemoautotrophic Beggiatoa sp. in oxygen-sulfide microgradients . Appl Environ Microbiol , 52 : 225 – 233 .
   PubMed Web of Science ®Google Scholar
• Neubauer , SC , Emerson , D and Megonigal , JP. 2002 . Life at the energetic edge: kinetics of circumneutral iron oxidation by lithotrophic iron-oxidizing bacteria isolated from the wetland-plant rhizosphere . Appl Environ Microbiol , 68 : 3988 – 3995 .
   PubMed Web of Science ®Google Scholar
• Nevin , KP and Lovley , DR. 2002 . Mechanisms of Fe(III) oxide reduction in sedimentary environments . Geomicrobiol J , 19 : 141 – 159 .
   Web of Science ®Google Scholar
• Peine , A , Tritschler , A , Kusel , K and Peiffer , S . 2000 . Electron flow in an iron-rich acidic sediment—evidence for an acidity-driven iron cycle . Limnol Oceanogr , 45 : 1077 – 1087 .
   Web of Science ®Google Scholar
• Pronk , JT and Johnson , DB. 1992 . Oxidation and reduction of iron by acidophilic bacteria . Geomicrobiol J , 10 : 153 – 171 .
   Web of Science ®Google Scholar
• Ratering , S and Schnell , S . 2000 . Localization of iron-reducing activity in paddy soil by profile studies . Biogeochemistry , 48 : 341 – 365 .
   Web of Science ®Google Scholar
• Rittmann , BE and McCarty , PL. 2001 . Environmental Biotechnology , 754 p Boston : McGraw-Hill .
   Google Scholar
• Roden , EE and Wetzel , RG. 1996 . Organic carbon oxidation and suppression of methane production by microbial Fe(III) oxide reduction in vegetated and unvegetated freshwater wetland sediments . Limnol Oceanogr , 41 : 1733 – 1748 .
   Web of Science ®Google Scholar
• Schippers , A and Jorgensen , BB. 2002 . Biogeochemistry of pyrite and iron sulfide oxidation in marine sediments . Geochim Cosmochim Acta , 66 : 85 – 92 .
   Web of Science ®Google Scholar
• Silverman , MP and Lundgren , DG. 1959 . Studies on the chemoautotrophic iron bacterium Ferrobacillus ferrooxidans. II. Manometric studies . J Bacteriol , 78 : 326 – 331 .
   PubMed Web of Science ®Google Scholar
• Singer , PC and Stumm , W . 1972 . Acid mine drainage–the rate limiting step . Science , 167 : 1121 – 1123 .
   Web of Science ®Google Scholar
• Sobolev , D and Roden , EE. 2001 . Suboxic deposition of ferric iron by bacteria in opposing gradients of Fe(II) and oxygen at circumneutral pH . Appl Environ Microbiol , 67 : 1328 – 1334 .
   PubMed Web of Science ®Google Scholar
• Sobolev , D and Roden , EE. 2002 . Evidence for rapid microscale bacterial redox cycling of iron in circumneutral environments . Anton van Leeuw , I81 : 587 – 597 .
   Web of Science ®Google Scholar
• Sobolev , D and Roden , E. 2004 . Characterization of a neutrophilic, chemolithoautotrophic Fe(II)-oxidizing β -Proteobacterium from freshwater wetland sediments . Geomicrobiol J , 21 : 1 – 10 .
   Web of Science ®Google Scholar
• Straub , KL and Buchholz-Cleven , BEE. 1998 . Enumeration and detection of anaerobic ferrous-iron oxidizing, nitrate-reducing bacteria from diverse European sediments . Appl Environ Microbiol , 64 : 4846 – 4856 .
   PubMed Web of Science ®Google Scholar
• Straub , KL , Benz , M and Schink , B . 2001 . Iron metabolism in anoxic environments at near neutral pH . FEMS Microbiol Ecol , 34 : 181 – 186 .
   PubMed Web of Science ®Google Scholar
• Straub , KL , Benz , M , Schink , B and Widdel , F . 1996 . Anaerobic, nitrate-dependent microbial oxidation of ferrous iron . Appl Environ Microbiol , 62 : 1458 – 1460 .
   PubMed Web of Science ®Google Scholar
• Stumm , W. 1992 . Chemistry of the solid-water interface , New York : John Wiley & Sons .
   Google Scholar
• Stumm , W and Morgan , JJ. 1996 . Aquatic Chemistry , New York : John Wiley & Sons .
   Google Scholar
• Stumm , W and Sulzberger , B . 1992 . The cycling of iron in natural environments: Considerations based on laboratory studies of heterogeneous redox processes . Geochim Cosmochim Acta , 56 : 3233 – 3257 .
   Web of Science ®Google Scholar
• Taillefert , M , Bono , A and Luther , G . 2000 . Reactivity of freshly formed Fe(III) in synthetic solutions and (pore)waters: voltammetric evidence of an aging process . Environ Sci Technol , 34 : 2169 – 2177 .
   Web of Science ®Google Scholar
• Tebo , BM and He , LM. 1999 . “ Microbially mediated oxidation precipitation reactions ” . In Mineral-Water Interfacial Reactions , Edited by: Sparks , DL and Grundl , TJ . pp. 393 – 414 . Washington, DC : Americal Chemical Society . In:
   Google Scholar
• Thamdrup , B . 2000 . Bacterial manganese and iron reduction in aquatic sediments . Adv Microb Ecol , 16 : 41 – 84 .
   Web of Science ®Google Scholar
• Thamdrup , B , Fossing , H and Jorgensen , BB. 1994 . Manganese, iron, and sulfur cycling in a coastal marine sediment, Aarhus Bay, Denmark . Geochim Cosmochim Acta , 58 : 5115 – 5129 .
   Web of Science ®Google Scholar
• Thamdrup , B , Finster , K , Hansen , JW and Bak , F . 1993 . Bacterial disproportionation of elemental sulfur coupled to chemical reduction of iron or manganese . Appl Environ Microbiol , 59 : 101 – 108 .
   PubMed Web of Science ®Google Scholar
• Thauer , RK , Jungermann , K and Decker , K . 1977 . Energy conservation in chemotrophic anaerobic bacteria . Bacteriol Rev , 41 : 100 – 180 .
   PubMedGoogle Scholar
• vandenEnde , FP , Meier , J and vanGermerden , H . 1997 . Syntrophic growth of sulfate-reducing bacteria and colorless sulfur bacteria during oxygen limitation . FEMS Microbiol Ecol , 23 : 65 – 80 .
   Web of Science ®Google Scholar
• vonGunten , U and Schneider , W . 1991 . Primary products of the oxygenation of iron(II) at an oxic anoxic boundary–nucleation, aggregation, and aging . J Colloid Interface Sci , 145 : 127 – 139 .
   Web of Science ®Google Scholar
• Weiss , JV , Emerson , D , Backer , SM and Megonigal , JP. 2003 . Enumeration of Fe(II)-oxidizing and Fe(III)-reducing bacteria in the root zone of wetland plants: Implications for a rhizosphere iron cycle . Biogeochemistry , 64 : 77 – 96 .
   Web of Science ®Google Scholar
• Westermann , P. 1993 . “ Wetland and swamp microbiology ” . In Aquatic Microbiology: an Ecological Approach , Edited by: Ford , TE. pp. 295 – 302 . Boston : Blackwell Scientific . In:
   Google Scholar
• Widdel , F , Schnell , S , Heising , S , Ehrenreich , A , Assmus , B and Schink , B . 1993 . Ferrous iron oxidation by anoxygenic phototrophic bacteria . Nature , 362 : 834 – 835 .
   Web of Science ®Google Scholar