Carbonate and Phosphate Precipitation by Chromohalobacter marismortui

REFERENCES

• Addadi , L , Raz , S and Weiner , S . 2003 . Taking advantage of disorder: amorphous calcium carbonates and its roles in biomineralization . Adv Mater , 15 : 959 – 970 . [CSA]
   Web of Science ®Google Scholar
• Ahimou , F , Denis , F A , Touhami , A and Dufrene , Y F . 2002 . Probing microbial cell surface charges by atomic force microscopy . Langmuir , 18 : 9937 – 9941 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Akbulut , A and Kadir , S . 2003 . Huntite deposits in the Neogene lacustrine sediments of the Cameli Basin, Denizli, SW Turkey . Carbonates Evaporites , 18 : 1 – 9 . [CSA]
   Web of Science ®Google Scholar
• Beavon , J and Heatley , N G . 1962 . The occurrence of struvite (magnesium ammonium phosphate hexahydrate) in microbial cultures . J Gen Microbiol , 31 : 167 – 169 . [CSA]
   Google Scholar
• Ben Chekroun , K , Rodríguez-Navarro , C , González-Muñoz , M T , Arias , J M , Cultrone , G and Rodríguez-Gallego , M . 2004 . Precipitation and growth morphology of calcium carbonate induced by Myxococcus xanthus: implications for recognition of bacterial carbonates . J Sediment Res , 74 : 868 – 876 . [CSA]
   Web of Science ®Google Scholar
• Berner , R A . 1975 . The role of magnesium in crystal growth of calcite and aragonite from seawater . Geochim Cosmochim Acta , 39 : 489 – 504 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Beveridge , T J and Fyfe , W S . 1985 . Metal fixation by bacterial cell walls . Canadian J Earth Sci , 22 : 1892 – 1898 . [CSA]
   Web of Science ®Google Scholar
• Bosak , T , Souza-Egipsy , V and Newman , K . 2004 . A laboratory model for abiotic peloid formation . Geobiology , 2 : 189 – 198 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Braissant , O , Cailleau , G , Dupraz , C and Verrecchia , A P . 2003 . Bacterially induced mineralization of calcium carbonate in terrestrial environment: the role of exopolysaccharides and amino-acids . J Sediment Res , 73 : 485 – 490 . [CSA]
   Web of Science ®Google Scholar
• Buczynski , C and Chafetz , H S . 1991 . Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy . J Sediment Petrol , 61 : 226 – 233 . [CSA]
   Web of Science ®Google Scholar
• Cailleau , P , Dragone , D , Girou , A , Humbert , L , Jacquin , C and Roques , H . 1977 . Etude expérimentale de la précipitation des carbonates de calcium en présence de l'ion magnésium . Bull Societé Française Minéral Crystallographie , 100 : 81 – 88 . [CSA]
   Google Scholar
• Cailleau , G , Braissant , O , Dupraz , C , Aragno , M and Verrecchia , E V . 2005 . Biologically induced accumulation of CaCO3 in orthox soils of Biga . Ivory Coast Catena , 59 : 1 – 17 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Calvert , S E and Pedersen , T F . 1996 . Sedimentary geochemistry of manganese: implications for the environment of formation of manganiferous black shales . Econ Geol Bull Soc Econ Geol , 91 : 36 – 47 . [CSA]
   Web of Science ®Google Scholar
• Cañaveras , J C , Sánchez-Moral , S , Soler , V and Sáiz-Jiménez , C . 2001 . Microorganisms and microbially induced fabrics in cave walls . Geomicrobiol J , 18 : 223 – 240 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Castanier , S , Le Métayer-Levrel , G and Perthuisot , J P . 1999 . Ca-carbonate precipitation and limestone genesis—the microbiologist point of view . Sediment Geol , 126 : 9 – 23 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Chafetz , H S and Buczynski , C . 1992 . Bacterially induced lithification of microbial mats . Palaios , 7 : 277 – 293 . [CSA]
   Google Scholar
• Cody , R D . 1991 . Organo-crystalline interactions in evaporite systems: the effects of crystallization inhibition . J Sediment Petrol , 61 : 704 – 718 . [CSA]
   Google Scholar
• Da Silva , S , Bernet , N , Delegenés , J P and Moletta , R . 2000 . Effect of culture conditions on the formation of struvite by Myxococcus xanthus . Chemosphere , 40 : 1289 – 1296 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
   PubMed Web of Science ®Google Scholar
• Davies , J P , Bubbela , B and Fergusson , J . 1977 . Simulation of carbonate diagenetic processes: formation of dolomite, huntite and monohydrocalcite by the reactions between nesquehonite and brine . Chem Geol , 19 : 187 – 214 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Deelman , J C . 2005 . “ Low temperature formation of dolomite and magnesite ” . In Geology Series, version 2.1 , Eindhoven : Compact Disc Publication .
   Google Scholar
• Dill , H G , Pollmann , H , Bosecker , K , Hahn , L and Mwiya , S . 2002 . Supergene mineralization in mining residues of the Matchless cupreous pyrite deposits (Namibia)—A clue to the origin of modern and fossil duricrusts in semiarid climates . J Geochem Explor , 75 : 43 – 70 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Ehrlich , H L . 2002 . Geomicrobiology. , 4th Ed. , New York : Marcel Dekker, Inc . Revised and Expanded
   Google Scholar
• Fernández-Díaz , L , Putnis , A , Prieto , M and Putnis , C V . 1996 . The role of magnesium in the crystallization of calcite and aragonite in a porous medium . J Sediment Res , 66 : 482 – 491 . [CSA]
   Web of Science ®Google Scholar
• Ferrer , M R , Quevedo-Sarmiento , J , Béjar , V , Delgado , R , Ramos-Cormenzana , A and Rivadeneyra , M A . 1988 . Calcium-carbonate formation by Deleya-halophila—effect of salt concentration and incubation-temperature . Geomicrobiol J , 6 : 49 – 57 . [CSA]
   Web of Science ®Google Scholar
• Ferris , F G , Fyfe , W S and Beveridge , T J . 1991 . “ Bacteria as nucleation sites for authigenic minerals ” . In Diversity of Environmental Biogeochemistry. Development in Geochemistry , Edited by: Berthelin , J . vol. 6 , 319 – 326 . Amsterdam : Elsevier .
   Google Scholar
• Fyfe , W S . 1964 . Geochemistry of Solids , New York : McGraw-Hill .
   Google Scholar
• Goldsmith , J R and Graf , D L . 1957 . The system CaO-MnO-CO2: solid-solution and decomposition relations . Geochim Cosmochim Acta , 11 : 310 – 334 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• González , L A . 1989 . Inorganic calcium carbonate precipitation: controls on mineralogy, morphology and trace elemental composition , Ann Arbor , MI : University Microfilm International .
   Google Scholar
• González , L A , Carpenter , S J and Lohmann , K C . 1992 . Inorganic calcite morphology. Roles of fluid chemistry and fluid-flow . J Sediment Petrol , 62 : 382 – 399 . [CSA]
   Google Scholar
• Graf , D L and Goldsmith , J R . 1956 . Some hydrothermal syntheses of dolomite and protodolomite . J Geol , 64 : 173 – 187 . [CSA]
   Web of Science ®Google Scholar
• Gutzmer , J and Beukes , N J . 1998 . The manganese formation of the Neoproterozoic Penganga Group, India—Revision of an enigma . Econ Geol Bull Soc Econ Geol , 93 : 1091 – 1112 . [CSA]
   Web of Science ®Google Scholar
• Iannace , S , Nicolais , L and Huang , S J . 1997 . Water sorption of glycol-modified crosslinked gelatine based hydrogels . J Mater Sci , 32 : 1405 – 1408 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Kastner , M , Zheng , Y , Laier , T , Jenkins , W and Ito , T . 1997 . “ Geochemistry of fluids and flow regime in the décollement zone at the northern Barbados Ridge ” . In Proceeding of the Ocean Drilling Program Scientific Results Edited by: Shipley , T H , Ogawa , Y , Blum , P and Bahr , J M . Vol. 156 , 311 – 319 .
   Google Scholar
• Kelleher , I J and Redfern , S AT . 2002 . Hydrous calcium magnesium carbonate, a possible precursor to the formation of sedimentary dolomite . Molecular Simulation , 28 : 557 – 572 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Kitano , Y and Hood , D W . 1962 . Calcium carbonate crystals formed from sea water by inorganic processes . J Ocean Soc Japan , 18 : 208 – 219 . [CSA]
   Google Scholar
• Kuhl , T , Guo , Y , Alderfer , J L , Berman , A D , Leckband , D , Israelachvili , J and Hui , S W . 1996 . Direct measurement of polyethylene glycol induced depletion attraction between lipid bilayers . Langmuir , 12 : 3003 – 3014 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Lowenstam , H A and Weiner , S . 1989 . On Biomineralization , Oxford : Oxford University Press .
   Google Scholar
• Lytle , D A , Johnson , C H and Rice , E W . 2002 . A systematic comparison of the electrokinetic properties of environmentally important microorganism in water . Coll Surf B , 24 : 91 – 101 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Maier , R M , Pepper , I L and Gerba , Ch P . 2000 . Environmental Microbiology , San Diego , CA : Academic Press .
   Google Scholar
• Martín , J D . 2004 . Using XPowder—a software package for powder X-ray diffraction analysis 105 http://www.xpowder.com.D.L. GR-1001/04. ISBN: 84-609-1497-6, Spain
   Google Scholar
• Martín-Algarra , A and Sánchez-Navas , A . 2000 . “ Bacterially mediated authigenesis in Mesozoic stromatolites from condensed pelagic sediments (Betic Cordillera, Southern Spain) ” . In Marine Authigenesis: From Global to Microbial , Edited by: Glenn , C R , Lucas , J and Prévôt-Lucas , L . Vol. 66 , 499 – 525 . Tulsa , OK : S.E.P.M. Special Publication .
   Google Scholar
• Morita , R Y . 1980 . Calcite precipitation by marine bacteria . Geomicrobiol J , 2 : 63 – 82 . [CSA]
   Web of Science ®Google Scholar
• Morse , J W and Mackenzie , F T . 1990 . “ Geochemistry of Sedimentary Carbonates ” . In Develop Sediment 48 , Amsterdam : Elsevier .
   Google Scholar
• Mutlu , H , Kadir , S and Akbulut , A . 1999 . Mineralogy and water chemistry of the Lake Acigol, Denizly, Turkey . Carbonates Evaporites , 14 : 191 – 199 . [CSA]
   Web of Science ®Google Scholar
• Nriagu , J O and Moore , P B . 1984 . Phosphate Minerals , 442 New York : Springer .
   Google Scholar
• Peacor , D R , Essene , E J and Gaines , A M . 1987 . Petrologic and crystal-chemical implications of cation order-disorder in kutnahorite [CaMn(CO3)2] . Amer Mineral , 72 : 319 – 328 . [CSA]
   Web of Science ®Google Scholar
• Peckmann , J , Paul , J and Thiel , V . 1999 . Bacterially mediated formation of diagenetic aragonite and native sulfur in Zechstein carbonates (Upper Permian, Central Germany) . Sediment Geol , 126 : 205 – 222 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Politi , Y , Arad , R , Klein , E and Addadi , L . 2004 . Sea urchin spine calcite forms via a transient amorphous calcium carbonate phase . Science , 306 : 1161 – 1164 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
   PubMed Web of Science ®Google Scholar
• Raz , S , Addadi , L and Weiner , S . 2000 . Formation of high magnesian calcites via an amorphous precursor phase: Possible biological implications . Adv Mater , 12 : 38 – 42 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Reeder , R J . 1983 . “ Crystal chemistry of the rhomboedral carbonates ” . In Carbonates: Mineral Chem, Rev Mineral Edited by: Reeder , R J . Vol. 11 , 1 – 47 .
   Google Scholar
• Reitner , J . 1993 . Modern cryptic microbialite/metazoan facies from Lizard Island (Great Barrier Reef, Australia): Formation and concepts . Facies , 29 : 3 – 40 . [CSA]
   Google Scholar
• Rivadeneyra , M A , Delgado , R , Delgado , G , Del Moral , A , Ferrer , M R and Ramos-Cormenzana , A . 1993 . Precipitation of carbonates by Bacillus sp isolated from saline soils . Geomicrobiol J , 11 : 175 – 184 . [CSA]
   Web of Science ®Google Scholar
• Rivadeneyra , M A , Delgado , R , Quesada , E and Ramos-Cormenzana , A . 1991 . Precipitation of calcium-carbonate by Deleya halophila in media containing NaCl as sole salt . Curr Microbiol , 22 : 185 – 190 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Rivadeneyra , M A , Delgado , G , Ramos-Cormenzana , A and Delgado , R . 1998 . Biomineralization of carbonates by Halomonas eurihalina in solid and liquid media with different salinities: crystal formation sequence . Res Microbiol , 149 : 277 – 287 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
   PubMed Web of Science ®Google Scholar
• Rivadeneyra , M A , Gutierrez-Calderón , A , Rivadeneyra , A M and Ramos-Cormenzana , A . 1999 . A study of struvite precipitation and urease activity in bacteria isolated from patients with urinary infections and their possible involvement in the formation of renal calculi . Urol Inter , 63 : 188 – 192 . [CSA] [CROSSREF]
   PubMed Web of Science ®Google Scholar
• Rivadeneyra , M A , Párraga , J , Delgado , R , Ramos-Cormenzana , A and Delgado , G . 2004 . Biomineralization of carbonates by Halobacillus trueperi in solid and liquid media with different salinities . FEMS Microbiol Ecol , 48 : 39 – 46 . [CSA] [CROSSREF]
   PubMed Web of Science ®Google Scholar
• Rivadeneyra , M A , Pérez-García , I and Ramos-Cormenzana , A . 1992a . Struvite precipitation by soil and fresh water bacteria . Curr Microbiol , 24 : 343 – 347 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Rivadeneyra , M A , Pérez-García , I and Ramos-Cormenzana , A . 1992b . Influence of ammonium ion on bacterial struvite production . Geomicrobiol J , 10 : 125 – 137 . [CSA]
   Web of Science ®Google Scholar
• Rivadeneyra , M A , Ramos-Cormenzana , A and García-Cervigón , A . 1983 . Bacterial formation of struvite . Geomicrobiol J , 3 : 151 – 163 . [CSA]
   Web of Science ®Google Scholar
• Rivadeneyra , M A , Ramos-Cormenzana , A and García-Cervigón , A . 1985 . Etude de l'influence du rapport Mg/Ca sur la formation de carbonates par des bacteria telluriques . Can J Microbiol , 31 : 229 – 231 . [CSA]
   Web of Science ®Google Scholar
• Robinson , H . 1898 . On the formation of struvite by microorganisms . Proc Camb Phil Soc , 6 : 360 – 362 . [CSA]
   Google Scholar
• Rosen , B P . 1987 . Bacterial calcium transport . Biochem Biophys Acta , 906 : 101 – 110 . [PUBMED] [INFOTRIEVE] [CSA]
   PubMed Web of Science ®Google Scholar
• Sánchez-Navas , A and Martín-Algarra , A . 2001 . Genesis of apatite in phosphate stromatolites . Eur J Mineral , 13 : 361 – 376 . [CSA] [CROSSREF]
   Web of Science ®Google Scholar
• Simkiss , K and Wilbur , K M . 1989 . “ Biomineralization Cell ” . In Biology and Mineral Deposition , San Diego , CA : Academic Press .
   Google Scholar
• Van der Mei , H C , de Vries , J and Busscher , H J . 2000 . X-ray photoelectron spectroscopy for the study of microbial cell surfaces . Surf Sci Rep , 39 : 1 – 24 . [CSA]
   Web of Science ®Google Scholar
• Van Lith , Y , Warthmann , R , Vasconcelos , C and McKenzie , J . 2003 . Microbial fossilization in carbonate sediments: a result of the bacterial surface involvement in dolomite precipitation . Sedimentology , 50 : 237 – 245 . [CSA]
   Web of Science ®Google Scholar
• Ventosa , A , Gutierrez , M C , García , M T and Ruiz-Berraquero , F . 1989 . Classification of “Chomobacterium marismortui” in a New Genus, Chromohalobacter gen.nov., as Chromohalobacter marismortui comb. nov., nom.rev . Inter J System Bacteriol , 39 : 382 – 385 . [CSA]
   Google Scholar
• Walsh , P J , Blackwelder , P , Gill , K A , Danulate , E and Mommsen , T P . 1991 . Carbonate deposits in marine fish intestines—A new source of biomineralization . Limnol Oceanog , 36 : 1227 – 1232 . [CSA]
   Web of Science ®Google Scholar
• Wolt , J D . 1994 . Soil Solution Chemistry: Applications to Environmental Science and Agriculture , New York : Wiley .
   Google Scholar