949
Views
159
CrossRef citations to date
0
Altmetric
Original Articles

An Anaerobic World in Sponges

, , , , , & show all
Pages 1-10 | Received 01 Jul 2004, Accepted 09 Sep 2004, Published online: 23 Feb 2007

REFERENCES

  • Amann , R I , Krumholz , L and Stahl , D A . 1990 . Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology . J Bacteriol , 172 ( 2 ) : 762 – 770 . [PUBMED] [INFOTRIEVE]
  • Belarbi , E H , Gómez , A C , Chisti , Y , Camacho , F G and Grima , E M . 2003 . Producing drugs from marine sponges . Biotechnol Adv , 21 : 585 – 598 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Blumenberg , M . 2003 . Biomarker aus Kaltwasser- und Tiefseekieselschwämmen , PhD thesis University of Hamburg .
  • Blunt , J W , Copp , B R , Munro , H GM , Northcote , P T and Prinsep , M R . 2003 . Marine natural products . Natural Prod Rept , 20 : 1 – 48 . [CROSSREF] [CSA]
  • Canfield , D E and Teske , A . 1996 . Late proterozoic rise in atmospheric oxygen concentration inferred from phylogenetic an sulphur-isotope studies . Nature , 382 : 127 – 132 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Cline , J D . 1969 . Spectrophotometric determination of hydrogen sulfide in natural waters . Limnol Oceanogr , 14 : 454 – 458 . [CSA]
  • Cornell , R M and Schwertmann , U . 1996 . The Iron Oxides—Structure, Properties, Reactions, Occurence and Use , 573 Weinheim Germany : VCH Verlagsgesellschaft mbH .
  • Daims , H , Brühl , A , Amann , R , Schleifer , K-H and Wagner , M . 1999 . The domain-specific probe EUB338 is insufficient for the detection of all bacteria: development and evaluation of a more comprehensive probe set . System Appl Microbiol , 22 : 434 – 444 . [CSA]
  • Debitus , C , Guella , G , Mancini , I , Waikedre , J , Guemas , J-P , Nicolas , J L and Pietra , F . 1998 . Quinolones from a bacterium and tyrosine metabolites from its host sponge, Suberea creba from the Coral Sea . J Mar Biotechnol , 6 : 136 – 141 . [PUBMED] [INFOTRIEVE] [CSA]
  • DeLong , E F , Taylor , L T , Marsh , T L and Preston , C M . 1999 . Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization . Appl Environ Microbiol , 65 ( 12 ) : 5554 – 5563 . [PUBMED] [INFOTRIEVE] [CSA]
  • Devereux , R , Kane , M D , Winfrey , J and Stahl , D A . 1992 . Genus- and group-specific hybridization probes for determinativ an envionmental studies of sulfate-reducing bacteria . System Appl Microbiol , 15 : 601 – 609 . [CSA]
  • Dubelier , N , Mülders , C , Ferdelman , T , Beer , Dd , Pernthaler , A , Klein , M , Wagner , M , Erseus , C , Thiermann , F , Krieger , J , Giere , O and Amann , R . 2001 . Endosymbiotic sulphate-reducing and sulfide-oxidizing bacteria in an oligochaete worm . Nature , 411 : 298 – 302 . [CROSSREF]
  • Ebel , R , Brenzinger , M , Kunze , A and Proksch , H J . 1997 . Wound activation of protoxins in marine sponge Aplysina aerophoba . J Chem Ecol , 23 : 1451 – 1462 . [CROSSREF] [CSA]
  • Faulkner , J D . 2002 . Marine natural products . Nat Prod Rept , 19 : 1 – 48 . [CSA]
  • Fossing , H and Jørgensen , B B . 1989 . Measurement of bacterial sulfate reduction in sediments: evaluation of a single-step chromium reduction method . Biogeochemistry , 8 : 205 – 222 . [CROSSREF]
  • Garson , M J , Flowers , A E , Webb , R I , Charan , R D and McCaffrey , E J . 1998 . A sponge/dinoflaggelate association in the haplosclerid demosponge Haliclona sp: cellular origin of cytotoxic alkaloids by Percoll density gradient fractionation . Cell Tissue Res , 293 : 365 – 373 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Gatti , S , Brey , T , Müller , W EG , Heilmayer , O and Holst , G . 2002 . Oxygen microoptodes: a new tool for oxygen measurements in aquatic animal ecology . Mar Biol , 140 : 1075 – 1085 . [CROSSREF] [CSA]
  • Gerodette , T and Flechsig , A O . 1979 . Sediment-induced reduction in the pumping rate of the tropical sponge Verongia lacunosa . Mar Biol , 55 : 103 – 110 . [CROSSREF]
  • Glöckner , F O , Fuchs , B M and Amann , R . 1999 . Bacterioplankton composition of lakes and oceans: a first comparison based on fluorescence in situ hybridization . Appl Environ Microbiol , 65 ( 8 ) : 3721 – 3726 . [CSA]
  • Grieshaber , M K , Hardewig , I , Kreutzer , U and Pörtner , H-O . 1994 . Physiological and metabolic responses to hypoxia in invertebrates . Rev Physiol Biochem Pharmacol , 125 : 44 – 129 .
  • Gruber , G and Reitner , J . 1991 . Isolated poriferan micro- and megascleres from the lower Campanian of Höver (northern Germany) and remarks on the phylogeny of the taxon Geodiidae (Demospongiae) . Berliner Geowissenschaftliche Abhandlungen (A) , 134 : 107 – 117 .
  • Gryglewicz , G and Gryglewicz , S . 2001 . Determination of elemental sulfur in coal by gas chromatography-mass spectrometry . Fresenius J Anal Chem , 370 : 60 – 63 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Guan , L L , Kanoh , K and Kamino , K . 2001 . Effect of exogenous siderophores on iron uptake activity of marine bacteria under iron-limited conditions . Appl Environ Microbiol , 67 ( 4 ) : 1710 – 1717 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Habicht , K and Canfield , D E . 1996 . Sulphur isotope fractionation in modern microbial mats and the evolution of the sulphur cycle . Nature , 382 : 342 – 343 . [CROSSREF]
  • Hahn , S , Stoilov , I L , TamHa , T B , Raederstorff , D , Doss , G A , Li , H-T and Djerassi , C . 1988 . Biosynthetic studies of marine lipids. 17. The course of chain elongation and desaturation in long-chain fatty acids of marine sponges . J Am Chem Soc , 110 ( 24 ) : 8117 – 8124 .
  • Hentschel , U , Hopke , J , Horn , M , Friedrich , A B , Wagner , M , Hacker , J and Moore , B S . 2002 . Molecular evidence for a uniform microbial community in sponges from different oceans . Appl Environ Microbiol , 68 ( 9 ) : 4431 – 4440 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hentschel , U , Schmid , M , Wagner , M , Fieseler , L , Gernert , C and Hacker , J . 2001 . Isolation and phylogenetic analysis of bacteria with antimicrobial activities from the Mediterranean sponges Aplysina aerophoba and Aplysina cavernicola . FEMS Microbiol Ecol , 35 : 305 – 312 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hoffmann , F . 2003 . Microbial sulfate reduction in the tissue of the cold-water sponge Geodia barretti. PhD thesis, University of Göttingen, Department of Geosciences Available online: ⟨http://webdoc.sub.gwdg.de/diss/2003/ hoffmann/index.html⟩
  • Hoffmann , F , Janussen , D , Dröse , W , Arp , G and Reitner , J . 2003a . Histological investigation of organisms with hard skeletons: a case study of siliceous sponges . Biotech Histochem , 78 ( 3–4 ) : 191 – 199 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hoffmann , F , Rapp , H T , Zöller , T and Reitner , J . 2003b . Growth and regeneration in cultivated fragments of the boreal deep water sponge Geodia barretti Bowerbank, 1858 (Geodiidae, Tetractinellida, Demospongiae) . J Biotechnol , 100 ( 2 ) : 109 – 118 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Hoffman , F , Larsen , O , Rapp , H T and Osinga , R . Mar Biol Res . “ Oxygen dynamics in choanosomal sponge explants ” . In Mar Biol Res. in press
  • Ilan , M and Abelson , A . 1995 . The life of a sponge in a sandy lagoon . Biol Bull , 189 : 363 – 369 .
  • Klitgaard , A B , Tendal , O S and Westerberg , H . 1997 . Mass occurence of large sponges (Porifera) in Faroe Island (NE Atlantic) shelf and slope areas: characteristics, distribution and possible causes . Proceedings of the 30th European Marine Biological Symposium, Southampton, UK, September , 1995 : 129 – 141 .
  • Knittel , K , Boetius , A , Lemke , A , Eilers , H , Lochte , K , Pfannkuche , O and Linke , P . 2003 . Activity, distribution, and diversity of sulfate reducers and other bacteria in sediments above gas hydrates (Cascadia Margin, Oregon) . Geomicrobiol , 20 : 269 – 294 . [CROSSREF]
  • Knoll , A H and Carroll , S B . 1999 . Early animal evolution: emerging views from comparative biology and geology . Science , 284 : 2129 – 2137 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Kohring , L L , Ringelberg , D B , Devereux , R , Stahl , D A , Mittelman , M. W. and White , D C . 1994 . Comparison of phylogenetic relationships based on phospholipid fatty acid profiles and ribosomal RNA sequence similarities among dissimilatory sulfate-reducing bacteria . FEMS Microbiol Lett , 119 : 303 – 308 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Lee , E-Y , Lee , H K , Lee , YK , Sim , J C and Lee , J-H. 2003 . Diversity of symbiotic archaeal communities in marine sponges from Korea . Biomol Eng , 20 : 299 – 304 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Li , C W , Chen , J Y and Hua , T E . 1998 . Precambrian sponges with cellular structures . Science , 279 : 879 – 882 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Lidgren , G and Bohlin , L . 1986 . Studies of Swedish marine organisms VII. A novel biologically active indole alkaloid from the sponge Geodia baretti . Tetrahed Lett , 27 ( 28 ) : 3283 – 3284 . [CROSSREF]
  • Manz , W , Amann , R , Ludwig , W , Wagner , M and Schleifer , K-H. 1992 . Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: problems and solutions . System Appl Microbiol , 15 : 593 – 600 . [CSA]
  • Manz , W , Arp , G , Schumann-Kindel , G , Szewzyk , U and Reitner , J . 2000 . Widefield deconvolution epifluorescence microscopy combined with fluorescence in situ hybridization reveals the spatial arrangement of bacteria in sponge tissue . J Microbiol Meth , 40 : 125 – 134 . [CROSSREF] [CSA]
  • Manz , W , Eisenbrecher , M , Neu , T R and Szewzyk , U . 1998 . Abundance and spatial organization of gram-negative sulfate-reducing bacteria in activated sludge investigated by in situ probing with specific 16S rRNA targeted oligonucleotides . FEMS Microbiol Ecol , 25 : 43 – 61 . [CROSSREF] [CSA]
  • Margot , H , Acebal , C , Toril , E , Amils , R and Puentes , J LF . 2002 . Consistent association of crenarchaeal Archaea with sponges of the genus Axinella . Mar Biol , 140 : 739 – 745 . [CROSSREF] [CSA]
  • Minz , D , Flax , J L , Green , S J , Muyzer , G , Cohen , Y , Wagner , M , Rittmann , B E and Stahl , D A . 1999 . Diversity of sulfate-reducing bacteria in oxic and anoxic regions of a microbial mat characterized by comparative analysis of dissimilatory sulfite reductase genes . Appl Environ Microbiol , 65 ( 10 ) : 4666 – 4671 . [PUBMED] [INFOTRIEVE] [CSA]
  • Müller , W EG , Grebenjuk , V A , Thakur , N L , Thakur , A N , Batel , R , Krasko , A , Müller , I M and Breter , H J . 2004 . Oxygen-controlled bacterial growth in the sponge Suberites domuncula: towards a molecular understanding of the symbiotic relationships between sponge and bacteria . Appl Environ Microbiol , 70 ( 4 ) : 2332 – 2341 . [CROSSREF] [CSA]
  • Müller , W EG , Wiens , M , Batel , R , Steffen , R , Schröder , H , Borojevic , R and Custodio , M . 1999 . Establishment of a primary cell culture from a sponge: primmorphs . Mar Ecol Progress Ser , 178 : 205 – 219 . [CSA]
  • Mußmann , M , Ishii , K , Rabus , R and Amann , R . 2005 . Diversity and distribution of cultured and uncultured delta proteobacteria in an intertidal mud flat of the Wadden Sea . Environ Microbiol , 7 ( 3 ) : 403 – 418 .
  • Osinga , R , Armstrong , E , Burgess , J G , Hoffmann , F , Reitner , J and Schumann-Kindel , G . 2001a . Sponge-microbe associations and their importance for sponge bioprocess engineering . Hydrobiologia , 461 : 55 – 62 . [CROSSREF] [CSA]
  • Osinga , R , Kleijn , R , Groenendijk , E , Niesink , P , Tramper , J and Wijffels , R H . 2001b . Development of in vivo sponge cultures: Particel feeding by the tropical sponge Pseudosuberites aff. andrewsi . Mar Biotechnol , 3 : 544 – 554 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Osinga , R , Tramper , J and Wijffels , R H . 1999 . Cultivation of marine sponges . Mar Biotechnol , 1 : 509 – 532 . [PUBMED] [INFOTRIEVE] [CSA]
  • Pape , T , Blumenberg , M , Thiel , V and Michaelis , W . 2004 . Biphytanes as biomarkers for sponge-associated bacteria . Boll. Mus. Ist. biol. Univ. Genova , 68 : 509 – 515 .
  • Pennec , G L , Perovic , S , Ammar , M SA , Grebenjuk , V A , Steffen , R , Brümmer , F and Müller , W EG . 2003 . Cultivation of primmorphs from the marine sponge Suberites domuncula: morphogenesic potential of silicon and iron. A review . J Biotechnol , 100 ( 2 ) : 93 – 108 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Pernthaler , A , Preston , C M , Pernthaler , J , DeLong , E F and Amann , R . 2002 . Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea . Appl Environ Microbiol , 68 ( 2 ) : 661 – 667 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Pile , A J , Patterson , M R , Savarese , M , Chernykh , V I and Fialkov , V A . 1997 . Trophic effects of sponge feeding within Lake Baikal's littoral zone. 1. In situ pumping rate . Limnol Oceanogr , 42 ( 1 ) : 171 – 178 . [CSA]
  • Pile , A J , Patterson , M R and Witman , J D . 1996 . In situ grazing on planktion <10 μm by the boreal sponge Mycale lingua . Mar Ecol Prog Seri , 141 : 95 – 102 . [CSA]
  • Pomponi , S A and Willoughby , R . 1994 . “ Sponge cell culture for production of bioactive metabolites ” . In Sponges in time and space , Edited by: Soest , R WMv , Kempen , T MG and Braekman , J C. 395 – 400 . Rotterdam : A. A. Balkema .
  • Preston , C M , Wu , K Y , Molinski , T F and DeLong , E F . 1996 . A psychrophilic crenarcheon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov . Proc Natl Acad Sci USA , 93 : 6241 – 6246 . [PUBMED] [INFOTRIEVE] [CSA]
  • Ravenschlag , K , Sahm , K , Knoblauch , C , Jörgensen , B B and Amann , R . 2000 . Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine arctic sediments . Appl Environ Microbiol , 66 ( 8 ) : 3592 – 3602 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Reiswig , H M . 1971 . In situ pumping activities of tropical Demospongiae . Mar Biol , 9 : 38 – 50 . [CROSSREF] [CSA]
  • Reiswig , H M . 1974 . Water transport, respiration and energetics of three tropical marine sponges . J Exp Mar Biol Ecol , 14 : 2310 – 249 .
  • Reiswig , H M . 1981 . Partial carbon and energy budgets of the bacteriosponge Verongia fistularis (Porifera: Demospongiae) in Barbados . Mar Ecol Prog Ser , 2 : 273 – 293 .
  • Reitner , J and Mehl , D . 1995 . Early paleozoic diversification of sponges: new data and evidences . Geol Paläontol Mitt Innsbruck , 20 : 335 – 347 .
  • Reitner , J and Wörheide , G . 2002 . “ Non-Lithistid fossil Demospongiae—origins of their palaeobiodiversity and highlights in history of preservation ” . In Systema Porifera , Edited by: Hooper , J NA and Soest , R WMv . 52 – 68 . New York : Kluwer .
  • Revsbech , N P and Jørgensen , B B. 1986 . Microelectrodes: their use in microbial ecology . Advances in Microb Ecol , 9 : 293 – 352 .
  • Santavy , D L , Willenz , P and Colwell , R R . 1990 . Phenotypic study of bacteria associated with the carribean sclerosponge, Ceratoporella nicholsoni . Appl Environ Microbiol , 56 : 1750 – 1762 . [PUBMED] [INFOTRIEVE] [CSA]
  • Schönberg , C HL , Hoffmann , F and Gatti , S . 2004 . Using microsensors to measure sponge physiology. Boll. Mus. Ist. biol. Univ . Genova , 68 : 593 – 604 . [CSA]
  • Schumann-Kindel , G , Bergbauer , M , Manz , W , Szewyk , U and Reitner , J . 1997 . Aerobic and anaerobic microorganisms in modern sponges: a possible relationship to fossilization-processes . Facies , 36 : 268 – 272 .
  • Shen , Y , Buick , R and Canfield , D E . 2001 . Isotopic evidence for microbial sulphate reduction in the early Archaean era . Nature , 410 : 77 – 81 . [PUBMED] [INFOTRIEVE] [CROSSREF]
  • Sigalevich , P , Meshorer , E , Helman , Y and Cohen , Y . 2000 . Transition from anaerobic to aerobic growth conditions for the sulfate-reducing bacterium Desulfovibrio oxyclinaeresults in flocculation . Appl Environ Microbiol , 66 ( 11 ) : 5005 – 5012 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sjögren , M , Göransson , U , Johnson , A-L , Dahlström , M , Andersson , R , Bergman , J , Jonsson , P R and Bohlin , L . 2004 . Antifouling activity of brominated cyclopeptides from the marine sponge Geodia barretti . J Nat Prod , 67 ( 3 ) : 368 – 372 . [CROSSREF]
  • Sölter , S , Dieckmann , R , Blumenberg , M and Francke , W . 2002 . Barettin, revisited' . Tetrahed Lett , 43 ( 18 ) : 3385 – 3386 . [CROSSREF]
  • Stahl , D A and Amann , R I . 1991 . “ Development and application of nucleic acid probes in bacterial systematics ” . In Sequencing and Hybridization Techniques in Bacterial Systematics , Edited by: Stackebrandt , E and Godfellow , M. 205 – 248 . Chichester, UK : John Wiley & Sons .
  • Teske , A , Ramsing , N B , Habicht , K , Fukui , M , Küver , J , Jörgensen , B B and Cohen , Y . 1998 . Sulfate-reducing bacteria and their activities in cyanobacterial mats of Solar Lake (Sinai, Egypt) . Appl Environ Microbiol , 64 : 2943 – 2951 . [PUBMED] [INFOTRIEVE] [CSA]
  • Thakur , N L and Müller , W EG . 2004 . Biotechnological potential of marine sponges . Curr Sci , 86 ( 11 ) : 1506 – 1512 .
  • Thiel , V , Blumenberg , M , Hefter , J , Pape , T , Pomponi , S , Reed , J , Reitner , J , Wörheide , G and Michaelis , W . 2002 . A chemical view of the most ancient metazoa—biomarker chemotaxonomy of hexactinellid sponges . Naturwissenschaften , 89 : 60 – 66 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Thiel , V , Jenisch , A , Wörheide , G , Löwenberg , A , Reitner , J and Michaelis , W . 1999 . Mid-chain branched alkanoic acids from “living fossil“ demosponges: a link to ancient sedimentary lipids' . Org Geochem , 30 : 1 – 14 . [CROSSREF] [CSA]
  • Turon , X , Becerro , M A and Uriz , M J . 2000 . Distribution of brominated compounds within the sponge Aplysina aerophoba: coupling of X-ray microanalysis with cryofixation techniques . Cell Tiss Res , 301 : 311 – 322 . [CROSSREF] [CSA]
  • Unson , M D , Holland , N D and Faulkner , D J . 1994 . A brominated secondary matabolite synthesized by the cyanobacterial symbiont of a marine sponge and accumulation of the crystalline metabolite in the sponge tissue . Mar Biol , 124 : 1 – 10 . [CROSSREF] [CSA]
  • Vacelet , J , Fiala-Médioni , A , Fisher , C R and Boury-Esnault , N . 1996 . Symbiosis between methane-oxidizing bacteria and a deep-sea carnivorous cladorhizid sponge . Mar Ecol Prog Ser , 145 : 77 – 85 . [CSA]
  • Vogel , S . 1977 . Current-induced flow through living sponges in nature . Proceedings of the National Academy of Science USA , 74 ( 5 ) : 2069 – 2071 . [CSA]
  • Webster , N S , Watts , J EM and Hill , R T . 2001a . Detection and phylogenetic analysis of novel Crenarcheote and Euryarcheote 16S Ribosomal RNA gene sequence from a Great Barrier Reef sponge . Mar Biotechnol , 3 : 600 – 608 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Webster , N S , Wilson , K J , Blackall , L L and Hill , R T . 2001b . Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile . Appl Environ Microbiol , 67 ( 1 ) : 434 – 444 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Wilkinson , C R . 1984 . Immunological evidence for Precambrian origin of bacterial symbioses in marine sponges . Proc R Soc Lond B , 220 : 509 – 517 .
  • Wilkinson , C R and Garrone , R . 1980 . “ Nutrition of marine sponges. Involvement of symbiotic bacteria in the uptake of dissolved carbon ” . In Nutrition in Lower Metazoa , Edited by: Smith , D C and Tiffon , Y . 157 – 161 . Oxford : Pergamon Press .
  • Yahel , G , Sharp , J H , Marie , D , Häse , C and Genin , A . 2003 . In situ feeding and element removal in the symbiont-bearing sponge Theonella swinhoei: bulk DOC is the major source for carbon . Limnol Oceanogr , 48 ( 1 ) : 141 – 149 . [CSA]

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.