Radionuclide Geomicrobiology of the Deep Biosphere

REFERENCES

• Ahrland , S. 1986 . “ Solution chemistry and kinetics of ionic reactions ” . In The Chemistry of the Actinide Elements , Edited by: Katz , J J , Morss , L R and Seaborg , G T . Vol. 2, part 2 , 1480 – 1546 . New York : Chapman and Hall .
   Google Scholar
• Albrecht-Gary , A M , Blanc , S , Rochel , N , Ocakatan , A Z and Abdallah , M A . 1994 . Bacterial iron transport: coordination properties of pyoverdine PaA, a peptidic siderophore of Pseudomonas aeruginosa . Inorg Chem , 33 : 6391 – 6402 .
   Web of Science ®Google Scholar
• Amend , J P and Teske , A . 2005 . Expanding frontiers in deep subsurface microbiology . Palaeogeogr Palaeocl , 219 : 131 – 155 .
   Web of Science ®Google Scholar
• Anderson , C R , Fru , E C , James , R E , Kennedy , C B and Pedersen , K . 2006a . In situ ecological development of a bacteriogenic iron oxide producing microbial community from subsurface granitic rock environment . Geobiol J , 4 : 29 – 42 .
   Web of Science ®Google Scholar
• Anderson , C R , Jakobsson , A-M and Pedersen , K . 2006b . Autoradiographic comparisons of radionuclide adsorption between subsurface anaerobic biofilms and granitic host rocks . Geomicrobiol J , 23 : 15 – 29 .
   Web of Science ®Google Scholar
• Anderson , C R , Jakobsson , A-M , Albinsson , Y and Pedersen , K . 2007 . Influence of in situ biofilm coverage on the radionuclide adsorption capacity and metal desorption characteristics of subsurface granite . Environ Sci Technol , 41 : 830 – 836 .
   PubMed Web of Science ®Google Scholar
• Anderson , C R and Pedersen , K . 2003 . In situ growth of Gallionella biofilms and partitioning of lanthanides and actinides between biological material and ferric oxy-hydroxides . Geobiol J , 1 : 169 – 176 .
   Web of Science ®Google Scholar
• Anderson , C R and Pedersen , K . 2004 . Adsorption and retention of 238U and 232Th from groundwater using BIOS. Materials Research Society: Scientific Basis for Nuclear Waste Management XXVII . Mat Res Soc Proc , 807 : 817 – 822 .
   Google Scholar
• Ansoborlo , É , Amekraz , B , Moulin , C , Moulin , V , Taran , F , Bailly , T , Burgada , R , Hengé-Napoli , M-H , Jeanson , A , Den Auwer , C , Bonin , L and Moisy , P . 2007 . Review of actinide decorporation with chelating agents . C R Chim , 10 : 1010 – 1019 .
   Web of Science ®Google Scholar
• Banaszak , JE. 1999 . Subsurface interactions of actinide species and microorganisms: implications for the bioremediation of actinide–organic mixtures . J Radioanal Nuc Chem , 241 : 385 – 435 .
   Web of Science ®Google Scholar
• Banwart , S , Gustafsson , J P and Laaksharju , M . 1999 . Hydrological and reactive processes during rapid recharge to fracture zones: the Äspö large scale redox experiment . Appl Geochem , 14 : 873 – 892 .
   Web of Science ®Google Scholar
• Barkleit , A , Moll , H and Bernhard , G . 2008 . Interaction of U(VI) with lipopolysaccharide . Dalton Trans , 21 : 2879 – 2886 .
   PubMed Web of Science ®Google Scholar
• Barkleit , A , Moll , H and Bernhard , G . 2009 . Complexation of U(VI) with peptidoglycan . Dalton Trans , 27 : 5379 – 5385 .
   PubMed Web of Science ®Google Scholar
• Bau , M. 1999 . Scavenging of dissolved yttrium and rare earth elements by precipitating iron oxyhydroxide: experimental evidence for Ce oxidation, Y-Ho fractionation, and lanthanide tetrad effect . Geochim Cosmochim Acta , 63 : 66 – 77 .
   Web of Science ®Google Scholar
• Bau , M , Usui , A , Pracejus , B , Mita , N , Kanai , Y , Irber , W and Dulski , P . 1998 . Geochemistry of low-temperature water–rock interaction: evidence from natural waters, andesite, and iron-oxyhydroxide precipitates at Nishiki-Numa iron-spring, Hokkaido, Japan . Chem Geol , 151 : 293 – 307 .
   Web of Science ®Google Scholar
• Bennett , P C , Hiebert , F K and Rogers , J R . 2000 . Microbial control of mineral–groundwater equilibria: macroscale to microscale . Hydrogeol J , 8 : 47 – 62 .
   Web of Science ®Google Scholar
• Beveridge , T J , Makin , S A , Kadurugamuwa , J L and Li , Z . 1997 . Interactions between biofilms and the environment . FEMS Microbiol Rev , 20 : 291 – 303 .
   PubMed Web of Science ®Google Scholar
• Beveridge , T J and Fyfe , W S . 1985 . Metal fixation by bacterial walls . Can J Earth Sci , 22 : 1893 – 1898 .
   Web of Science ®Google Scholar
• Binstead , R A , Zuberbühler , A D and Jung , B . 2004 . “ SPECFIT Global Analysis System Version 3.0.35 ” .
   Google Scholar
• Birch , L and Bachofen , R . 1990 . Complexing agents from microorganisms . Experientia , 46 : 827 – 834 .
   Google Scholar
• Bouby , M , Billard , I and MacCordick , J . 1998a . Complexation of U(VI) with the siderophore pyoverdine . Radiochim Acta , 80 : 95 – 100 .
   Web of Science ®Google Scholar
• Bouby , M , Billard , I and MacCordick , J . 1999 . Selective behavior of the siderophore pyoverdine A towards UO2 2+, Th4+, U4+ and other cations . Czechoslovak J Phys , 49 : 147 – 150 .
   Web of Science ®Google Scholar
• Boukhalfa , H. and Crumbliss , A. 2002 . Chemical aspects of siderophore mediated iron transport . BioMetals , 15 : 325 – 339 .
   PubMed Web of Science ®Google Scholar
• Boukhalfa , H , Reilly , S D and Neu , M P . 2007 . Complexation of Pu(IV) with the natural siderophore desferrioxamine B and the redox properties of Pu(IV)(siderophore) complexes . Inorg Chem , 46 : 1018 – 1026 .
   PubMed Web of Science ®Google Scholar
• Brainard , J R , Strietelmeier , B A , Smith , P H , Langston-Unkefer , P J , Barr , M E and Ryan , R R . 1992 . Actinide binding and solubilization by microbial siderophores . Radiochim Acta , 58–59 : 357 – 363 .
   Web of Science ®Google Scholar
• Brown , D A , Kamineni , D C , Sawicki , J A and Beveridge , T J . 1994 . Minerals associated with biofilms occurring on exposed rock in a granitic underground research laboratory . Appl Environ Microbiol , 60 : 3182 – 3191 .
   PubMed Web of Science ®Google Scholar
• Buckau , G and Duro , L D . 2nd Annual Workshop Proceedings of the Integrated Project “Fundamental Processes of Radionuclide Migration”–6th EC FP IP FUNMIG. Technical report TR-07-05 . Stockholm. Swedish Nuclear Fuel and Waste Management Company (SKB) .
   Google Scholar
• Budzikiewicz , H. 2004 . Siderophores of the Pseudomonadaceae sensu stricto (fluorescent and non-fluorescent Pseudomonas spp.) . Fortschr Chem Org Naturst , 87 : 81 – 237 .
   PubMedGoogle Scholar
• Byegård , J , Johansson , H , Skålberg , M and Tullborg , E . 1998 . “ The interaction of sorbing and non-sorbing tracers with different Äspö rock types ” . Technical Report TR-98-18 Stockholm : Swedish Nuclear Fuel and Waste Management Company (SKB) .
   Google Scholar
• Cao , Z , Balasubramanian , K , Calvert , M G and Nitsche , H . 2009 . Solvation effects on isomeric preferences of Curium(III) complexes with multidentate phosphonopropionic acid ligands: CmH2PPA2+ and CmHPPA+ complexes . Inorg Chem , 48 : 9700 – 9714 .
   PubMed Web of Science ®Google Scholar
• Carrott , M J , Fox , O D , Maher , C J , Mason , C and Taylor , R J . 2007 . Solvent extraction behavior of Pu(IV) ions in the presence of simple hydroxamic acids . Solvent Extr Ion Exc , 25 : 723 – 745 .
   Web of Science ®Google Scholar
• Chatellier , X , Fortin , D , West , M M , Leppard , G G and Ferris , F G . 2001 . Effect of the presence of bacterial surfaces during the synthesis of Fe oxides by oxidation of ferrous ions . Eur J Mineral , 13 : 705 – 714 .
   Web of Science ®Google Scholar
• Chen , B , Utgikar , V , Harmon , S , Tabak , H , Bishop , D and Govind , R . 2000 . Studies of biosorption of zinc(II) and copper(II) on Desulfovibrio desulfuricans . Int Biodet Biodeg , 46 : 11 – 18 .
   Web of Science ®Google Scholar
• Chinni , S , Anderson , C R , Ulrich , K-U , Giammar , D E and Tebo , B M . 2008 . Indirect UO2 oxidation by the Mn(II)-oxidising spores of Bacillus sp. strain SG-1 and the effect of U and Mn concentrations . Environ Sci Technol , 42 : 8709 – 8714 .
   PubMed Web of Science ®Google Scholar
• Choppin , GR. 2005 . Actinide Science: fundamental and environmental aspects . J Nucl Radiochem Sci , 6 : 1 – 5 .
   Google Scholar
• Chung , K H , Klenze , R , Park , K K , Paviet-Hartmann , P and Kim , J I . 1998 . A study of the surface sorption process of Cm(III) on silica by time-resolved laser fluorescence spectroscopy (I) . Radiochim Acta , 82 : 215 – 220 .
   Web of Science ®Google Scholar
• Combes , J M , Chisholm-Brause , C J , Brown , G E , Parks , G A , Conradson , S D , Eller , P G , Triay , I , Hobart , D E and Meier , A . 1992 . EXAFS spectroscopic study of neptunium (V) sorption at the a–FeOOH/water interface . Environ Sci Technol , 26 : 376 – 382 .
   Web of Science ®Google Scholar
• Cox , J S , Smith , D S , Warren , L A and Ferris , F G . 1999 . Characterizing heterogeneous bacterial surface functional groups using discrete affinity spectra for proton binding . Environ Sci Technol , 33 : 4514 – 4521 .
   Web of Science ®Google Scholar
• Daughney , C J , Fein , J B and Yee , N . 1998 . A comparison of the thermodynamics of metal adsorption onto two common bacteria . Chem Geol , 144 : 161 – 176 .
   Web of Science ®Google Scholar
• Daughney , C J , Fowle , D A and Fortin , D E . 2001 . The effect of growth phase on proton and metal adsorption by Bacillus subtilis . Geochim Cosmochim Acta , 65 : 1025 – 1035 .
   Web of Science ®Google Scholar
• Davis , J A and Kent , D B . 1990 . “ Surface complexation modelling in aqueous geochemistry ” . In Mineral–Water Interface Geochemistry , Edited by: Hochella , M F and White , A F . Vol. 23 , 177 – 260 . Washington, DC : Miner Soc Am .
   Google Scholar
• Deer , W A , Howie , R A and Zussman , J . 1992 . An Introduction to the Rock-forming Minerals , 2nd ed. , Essex, , UK : Addison Wesley Longman .
   Google Scholar
• Degens , E T and Ittekkot , V . 1982 . In situ metal-staining of biological membranes in sediments . Nature , 298 : 262 – 264 .
   Web of Science ®Google Scholar
• Denecke , M A , Reich , T , Pompe , S , Bubner , M , Heise , K H , Nitsche , H , Allen , P G , Bucher , J J , Edelstein , N M , Shuh , D K and Czerwinski , K R . 1998 . EXAFS investigations of the interaction of humic acids and model compounds with uranyl cations in solid complexes . Radiochim Acta , 82 : 103 – 108 .
   Web of Science ®Google Scholar
• Emerson , D. 2000 . “ Microbial oxidation of Fe(II) and Mn(II) at circumneutral pH ” . In Environmental Microbe–Metal Interactions , Edited by: Lovley , D R . 31 – 52 . Washington, DC : ASM Press .
   Google Scholar
• Essén , S , Johnsson , A , Bylund , D , Pedersen , K and Lundstrom , U S . 2007 . Siderophore production by Pseudomonas stutzeri under aerobic and anaerobic conditions . Appl Environ Microbiol , 73 : 5857 – 5864 .
   PubMed Web of Science ®Google Scholar
• Eydal , H SC , Jägevall , S , Hermansson , M and Pedersen , K . 2009 . Bacteriophage lytic to Desulfovibrio aespoeensis isolated from deep groundwater . ISME J , 3 : 1139 – 1147 .
   PubMed Web of Science ®Google Scholar
• Farkas , G , Gazsó , L G and Diósi , G . 2000 . Characterization of subterranean bacteria in the Upper Hungarian Permian siltstone (Aleurolite) formation . Can J Microbiol , 46 : 559 – 564 .
   PubMed Web of Science ®Google Scholar
• Fein , J B , Martin , A M and Wightman , P G . 2001 . Metal adsorption onto bacterial surfaces: development of a predictive approach . Geochim Cosmochim Acta , 65 : 4267 – 4273 .
   Web of Science ®Google Scholar
• Ferris , F G and Beveridge , T J . 1984 . Binding of a paramagnetic metal cation to Escherichia coli K-12 outer-membrane vesicles . FEMS. Microbiol Lett , 24 : 43 – 46 .
   Web of Science ®Google Scholar
• Ferris , F G , Konhauser , K O , Lyven , B and Pedersen , K . 1999 . Accumulation of metals by bacteriogenic iron oxides in a subterranean environment . Geomicrobiol J , 16 : 181 – 192 .
   Web of Science ®Google Scholar
• Ferris , F G , Schultze , S , Witten , T C , Fyfe , W S and Beveridge , T J . 1989 . Metal interactions with microbial biofilms in acidic and neutral pH environments . Appl Environ Microbiol , 55 : 1249 – 1257 .
   PubMed Web of Science ®Google Scholar
• Fowle , D A and Fein , J B . 1999 . Competitive adsorption of metal cations onto two gram positive bacteria: testing the chemical equilibrium model . Geochim Cosmochim Acta , 63 : 3059 – 3067 .
   Web of Science ®Google Scholar
• Francis , AJ. 2007 . Microbial mobilization and immobilization of Pu . J Alloys Comp , 444–445 : 500 – 505 .
   Web of Science ®Google Scholar
• Francis , A J , Gillow , J B , Dodge , C J , Dunn , M , Mantione , M , Strietelmeier , B A , Pansoy-Hjelvik , M E and Papenguth , H W . 1998 . Role of bacteria as biocolloids in the transport of actinides from a deep underground radioactive waste repository . Radiochim Acta , 82 : 347 – 354 .
   Web of Science ®Google Scholar
• Frazier , S , Kretzschmar , R and Kraemer , S . 2005 . Bacterial siderophores promote dissolution of UO2 under reducing conditions . Environ Sci Technol , 39 : 5709 – 5715 .
   PubMed Web of Science ®Google Scholar
• Gadd , GM. 1996 . Influence of microorganisms on the environmental fate of radionuclides . Endeavour , 20 : 150 – 156 .
   PubMed Web of Science ®Google Scholar
• Geckeis , H , Grambow , B , Loida , A , Luckscheiter , B , Smailos , E and Quinones , J . 1998 . Formation and stability of colloids under simulated near field conditions . Radiochim Acta , 82 : 123 – 128 .
   Web of Science ®Google Scholar
• Ghiorse , WC. 1984 . Biology of iron- and manganese-depositing bacteria . Ann Rev Microbiol , 38 : 515 – 550 .
   PubMed Web of Science ®Google Scholar
• Ghiorse , W C and Hirsch , P . 1979 . An ultrastructural study of iron and manganese deposition associated with extracellular polymers of Pedomicrobium-like budding bacteria . Arch Microbiol , 123 : 213 – 226 .
   Web of Science ®Google Scholar
• Ghiorse , W C and Wilson , J T . 1988 . Microbial ecology of the terrestrial subsurface . Adv Appl Microbiol , 33 : 107 – 172 .
   PubMed Web of Science ®Google Scholar
• Gorden , A , Xu , J and Raymond , K N . 2003 . Rational design of sequestering agents for Pu and other actinides . Chem Rev , 103 : 4207 – 4282 .
   PubMed Web of Science ®Google Scholar
• Hallbeck , L and Pedersen , K . 2005 . “ Gallionellaceae – Genus Gallionella Ehrenberg 1838 166AL ” . In Bergey's Manual of Systematic Bacteriology, vol. 2, part C, The Alpha-, Beta-, Delta-, and Epsilonproteobacteria , 9th ed. , Edited by: Brenner , D J , Krieg , N R and Staley , J T . 880 – 886 . New York : Springer .
   Google Scholar
• Hallbeck , L and Pedersen , K . 2008 . Characterization of microbial processes in deep aquifers of the Fennoscandian Shield . App Geochem , 23 : 1796 – 1819 .
   Web of Science ®Google Scholar
• Icopini , G A , Boukhalfa , H and Neu , M P . 2007 . Biological reduction of Np(V) and Np(V) citrate by metal-reducing bacteria . Environ Sci Technol , 41 : 2764 – 2769 .
   PubMed Web of Science ®Google Scholar
• Jägevall , S , Rabe , L and Pedersen , K . 2011 . Abundance and diversity of biofilms in deep granitic rock aquifers of the Äspö hard rock laboratory, Sweden . Microb Ecol 61:410–422 ,
   Google Scholar
• Jakobsson , A-M and Albinsson , Y . 1998 . Sorption of NpO2 + and Co2+ onto TiO2 . Radiochim Acta , 82 : 257 – 262 .
   Web of Science ®Google Scholar
• Johnsson , A , Arlinger , J , Ödegaard-Jensen , A , Albinsson , Y and Pedersen , K . 2006 . Solid–aqueous phase partitioning of radionuclides by complexing compounds excreted by subsurface bacteria . Geomicrobiol J , 23 : 621 – 630 .
   Web of Science ®Google Scholar
• Johnsson , A , Odegaard-Jensen , A , Jakobsson , A-M , Ekberg , C and Pedersen , K . 2008 . Bioligand-mediated partitioning of radionuclides to the aqueous phase . J Radioanal Nucl Chem , 277 : 637 – 644 . .7break;
   Web of Science ®Google Scholar
• Johnsson , A , Ödegaard-Jensen , A , Skarnemark , G and Pedersen , K . 2009 . Leaching of spent nuclear fuel in the presence of siderophores . J Radioanal Nucl Chem , 279 : 619 – 626 .
   Web of Science ®Google Scholar
• Kalinowski , B E , Johnsson , A , Arlinger , J , Pedersen , K , Ödegaard-Jensen , A and Edberg , F . 2006 . Microbial mobilization of U shale mine waste . Geomicrobiol J , 23 : 157 – 164 .
   Web of Science ®Google Scholar
• Kalinowski , B E , Oskarsson , A , Albinsson , Y , Arlinger , J , Ödegaard-Jensen , A , Andlid , T and Pedersen , K . 2004 . Microbial leaching of U and other trace elements from shale mine tailings at Ranstad . Geoderma , 122 : 177 – 194 .
   Web of Science ®Google Scholar
• Kappel , M J , Nitsche , H and Raymond , K M . 1985 . Specific sequestering agents for the actinides. 11. Complexation of plutonium and americium by catecholate ligands . Inorg Chem , 24 : 605 – 611 .
   Web of Science ®Google Scholar
• Kaszuba , J P and Runde , W H . 1999 . The aqueous geochemistry of neptunium: dynamic control of soluble concentrations with applications to nuclear waste disposal . Environ Sci Technol , 33 : 4427 – 4433 .
   Web of Science ®Google Scholar
• Kennedy , C B , Martinez , R E , Scott , S D and Ferris , F G . 2003a . Surface chemistry and reactivity of bacteriogenic iron oxides from Axial Volcano, Juan de Fuca Ridge, north-east Pacific Ocean . Geobiol , 1 : 59 – 69 .
   Web of Science ®Google Scholar
• Kennedy , C B , Scott , S D and Ferris , F G . 2003b . Characterisation of bacteriogenic iron oxide deposits from axial Volcano, Juan de Fuca Ridge, Northeast Pacific Ocean . Geomicrobiol J , 20 : 199 – 214 .
   Web of Science ®Google Scholar
• Kimura , T and Choppin , G R . 1994 . Luminescence study on the determination of the hydration number of Cm(III) . J Alloys Comp , 213/214 : 313 – 317 .
   Web of Science ®Google Scholar
• Kirby , HW. 1986 . “ Protactinium ” . In The Chemistry of the Actinide Elements, vol. 1, part 1 , Edited by: Katz , J J , Morss , L R and Seaborg , G T . 103 – 168 . New York : Chapman and Hall .
   Google Scholar
• Kraemer , S , Xu , J , Raymond , K M and Sposito , G . 2002 . Adsorption of Pb(II) and Eu(III) by oxide minerals in the presence of natural and synthetic hydroxamate siderophores . Environ Sci Technol , 36 : 1287 – 1291 .
   PubMed Web of Science ®Google Scholar
• Kukkadapu , R K , Zachara , J M , Fredrickson , J K , Smith , S C , Dohnalkova , A C and Russell , C K . 2003 . Transformation of 2-line ferrihydrite to 6-line ferrihydrite under oxic and anoxic conditions . Am Mineral , 88 : 1903 – 1914 .
   Web of Science ®Google Scholar
• Kyle , J E , Eydal , H SC , Ferris , F G and Pedersen , K . 2008 . Viruses in granitic groundwater from 69 to 450 m depth of the Äspö Hard Rock Laboratory, Sweden . ISME J , 2 : 571 – 574 .
   PubMed Web of Science ®Google Scholar
• Landa , ER. 2004 . U mill tailings: nuclear waste and natural laboratory for geochemical and radioecological investigations . J Environ Radioact , 77 : 1 – 27 .
   PubMed Web of Science ®Google Scholar
• Landström , O and Tullborg , E L . 1989 . “ The influence of fracture mineral/groundwater interaction on the mobility of U, Th, REE and other trace elements in different redox environments ” . In Water–Rock Interaction WRI-6 , Edited by: Miles , D L . Vol. 6 , 413 – 416 . Rotterdam : Balkema .
   Google Scholar
• Landström , O and Tullborg , E L . 1995 . “ Interactions of trace metals with fracture filling minerals from the Äspö Hard Rock Laboratory ” . Technical Report 95-13 Stockholm : Swedish Nuclear Fuel and Waste Management Company (SKB) .
   Google Scholar
• Langmuir , D. 1997 . Aqueous Environmental Geochemistry , Upper Saddle River, NJ : Prentice-Hall .
   Google Scholar
• Ledin , A , Duker , A , Stefan , K and Allard , B . 1995 . “ Measurements of colloid concentrations in the fracture zone, Äspö Hard Rock Laboratory, Sweden ” . Technical report TR-95-17 Stockholm : Swedish Nuclear Fuel and Waste Management Company (SKB) .
   Google Scholar
• Lippold , H , Mansel , A and Kupsch , H . 2005 . Influence of trivalent electrolytes on the humic colloid-borne transport of contaminant metals: competition and flocculation effects . J Contam Hydrol , 76 : 337 – 352 .
   PubMed Web of Science ®Google Scholar
• Lloyd , J R , Yong , P and Macaskie , L E . 2000 . Biological reduction and removal of pentavalent Np by the concerted action of two microorganisms . Environ Sci Technol , 34 : 1297 – 1301 .
   Web of Science ®Google Scholar
• Mann , S. 1988 . Molecular recognition in biomineralization . Nature , 332 : 119 – 124 .
   Web of Science ®Google Scholar
• Martinez , J S , Zhang , G P , Holt , P D , Jung , H T , Carrano , C J , Haygood , M G and Butler , A . 2000 . Self-assembling amphiphilic siderophores from marine bacteria . Science , 287 : 1245 – 1247 .
   PubMed Web of Science ®Google Scholar
• Matzanke , B. 1991 . “ Structures, coordination chemistry and function of microbial iron chelates ” . In Handbook of Microbial Iron Chelates , Edited by: Winkelmann , G . 15 – 65 . Boca Raton, FL : CRC Press .
   Google Scholar
• May , I , Taylor , R J , Denniss , I S , Brown , G E , Wallwork , A L , Hill , N J , Rawson , J M and Less , R . 1998 . Neptunium(IV) and U(VI) complexation by hydroxamic acids . J Alloys Comp , 275–277 : 769 – 772 .
   Web of Science ®Google Scholar
• Meyer , JM. 2000 . Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species . Arch Microbiol , 174 : 135 – 142 .
   PubMed Web of Science ®Google Scholar
• Meyer , J M and Abdallah , M A . 1978 . The fluorescent pigment of Pseudomonas fluorescens: biosynthesis, purification and physicochemical properties . J Gen Microbiol , 107 : 319 – 328 .
   Google Scholar
• Meyer , J M and Abdallah , M A . 1980 . The siderochromes of non-fluorescent pseudomonads: production of nocardamine by Pseudomonas stutzeri . J Gen Microbiol , 118 : 125 – 129 .
   Google Scholar
• Moll , H , Merroun , M , Stumpf , T , Rossberg , A , Geipel , G , Selenska-Pobell , S and Bernhard , G . 2005a . “ Interaction of actinides with the predominant indigenous bacteria in Äspö aquifer: Interactions of selected actinides U(VI), Cm(III), Np(V) and Pu(VI) with Desulfovibrio aespoeensis ” . Wissenschaftlich-Technische Berichte, FZR-422 Dresden, , Germany : Forschungszentrum Dresden-Rossendorf .
   Google Scholar
• Moll , H , Geipel , G and Bernhard , G . 2005b . Complexation of Cm(III) by adenosine 5’-triphosphate (ATP): a time-resolved laser-induced fluorescence spectroscopy (TRLFS) study . Inorg Chim Acta , 358 : 2275 – 2282 .
   Web of Science ®Google Scholar
• Moll , H , Glorius , M , Barkleit , A , Rossberg , A and Bernhard , G . 2009 . “ The mobilization of actinides by microbial ligands taking into consideration the final storage of nuclear waste: interactions of selected actinides U(VI), Cm(III), and Np(V) with pyoverdins secreted by Pseudomonas fluorescens and related model compounds ” . Wissenschaftlich-Technische Berichte, FZD-522 Dresden, , Germany : Forschungszentrum Dresden-Rossendorf .
   Google Scholar
• Moll , H , Glorius , M , Bernhard , G , Johnsson , A , Pedersen , K , Schäfer , M and Budzikiewicz , H . 2008a . Characterization of pyoverdins secreted by a subsurface strain of Pseudomonas fluorescens and their interactions with U(VI) . Geomicrobiol J , 25 : 157 – 166 .
   Web of Science ®Google Scholar
• Moll , H , Glorius , M , Johnsson , A , Schäfer , M , Budzikiewicz , H , Pedersen , K and Bernhard , G . 2010 . Neptunium(V) complexation by natural pyoverdins and related model compounds . Radiochim Acta , 98:571–576.
   Web of Science ®Google Scholar
• Moll , H , Johnsson , A , Schäfer , M , Pedersen , K , Budzikiewicz , H and Bernhard , G . 2008b . Cm(III) complexation with pyoverdins secreted by a groundwater strain of Pseudomonas fluorescens . Biometals , 21 : 219 – 228 .
   PubMed Web of Science ®Google Scholar
• Moll , H , Merroun , M L , Hennig , Ch , Rossberg , A , Selenska-Pobell , S and Bernhard , G . 2006 . The interaction of Desulfovibrio aespoeensis DSM 10631T with Pu . Radiochim Acta , 94 : 815 – 824 .
   Web of Science ®Google Scholar
• Moll , H , Stumpf , T , Merroun , M , Rossberg , A , Selenska-Pobell , S and Bernhard , G . 2004 . Time-resolved laser fluorescence spectroscopy study on the interaction of Cm(III) with Desulfovibrio aespoeensis DSM 10631T . Environ Sci Technol , 38 : 1455 – 1459 .
   PubMed Web of Science ®Google Scholar
• Motamedi , M and Pedersen , K . 1998 . Desulfovibrio aespoeensis sp. nov., a mesophilic sulfate-reducing bacterium from deep groundwater at Äspö Hard Rock Laboratory, Sweden . Int Syst Bacteriol , 48 : 311 – 315 .
   PubMedGoogle Scholar
• Neilands , JB. 1981 . Microbial iron compounds . Ann Rev Biochem , 50 : 715 – 731 .
   PubMed Web of Science ®Google Scholar
• Neilands , JB. 1995 . Siderophores: structure and function of microbial iron transport compounds . J Biol Chem , 270 : 26723 – 26726 .
   PubMed Web of Science ®Google Scholar
• Nelson , Y M , Lion , L W , Shuler , M L and Ghiorse , W C . 1999 . Lead binding to metal oxide and organic phases of natural aquatic biofilms . Limnol Ocean , 44 : 1715 – 1729 .
   Web of Science ®Google Scholar
• Neu , M P , Icopini , G A and Boukhalfa , H . 2005 . Pu speciation affected by environmental bacteria . Radiochim Acta , 93 : 705 – 714 .
   Web of Science ®Google Scholar
• O’Boyle , N C , Nicholson , G P , Piper , T J , Taylor , D M , Williams , D R and Williams , G . 1997 . A review of Pu(IV) selective ligands . Appl Rad Isotop , 48 : 183 – 200 .
   Web of Science ®Google Scholar
• Ohta , A and Kawabe , I . 2001 . REE(III) adsorption onto Mn dioxide (d-MnO2) and Fe oxyhydroxide: Ce(III) oxidation by d-MnO2 . Geochim Cosmochim Acta , 65 : 695 – 703 .
   Web of Science ®Google Scholar
• Ozaki , T , Gillow , J B , Francis , A J , Kimura , T , Ohnuki , T and Yoshida , Z . 2002 . Association of Eu(III) and Cm(III) with Bacillus subtilis and Halobacterium salinarum . J Nucl Sci Technol , 3 : 950 – 953 .
   Google Scholar
• Ozaki , T , Gillow , J B , Kimura , T , Ohnuki , T , Yoshida , Z and Francis , A J . 2004 . Sorption behavior of europium(III) and curium(III) on the cell surface of microorganisms . Radiochim Acta , 92 : 741 – 748 .
   Web of Science ®Google Scholar
• Ozaki , T , Kimura , T and Francis , A J . 2006 . Effects of ionic strength on the coordination of Eu(III) and Cm(III) to a gram-negative bacterium, Paracoccus denitrificans . Radiochim Acta , 94 : 715 – 721 .
   Web of Science ®Google Scholar
• Ozaki , T , Kimura , T , Ohnuki , T , Yoshida , Z and Francis , A J . 2003 . Association mechanisms of europium(III) and curium(III) with Chlorella vulgaris . Environ Toxicol Chem , 22 : 2800 – 2805 .
   PubMed Web of Science ®Google Scholar
• Panak , P J and Nitsche , H . 2001 . Interaction of aerobic soil bacteria with Pu(VI) . Radiochim Acta , 89 : 499 – 504 .
   Web of Science ®Google Scholar
• Panak , P , Selenska-Pobell , S , Kutschke , S , Geipel , G , Bernhard , G and Nitsche , H . 1999 . Complexation of U(VI) with cells of Thiobacillus ferrooxidans and Thiomonas cuprina of different geological origin . Radiochim Acta , 84 : 183 – 190 .
   Web of Science ®Google Scholar
• Parra , R , Ulery , A L , Elless , M P and Blaylock , M J . 2008 . Transient phytoextraction agents: establishing criteria for the use of chelants in phytoextraction of recalcitrant metals . Int J Phytorem , 10 : 415 – 429 .
   PubMed Web of Science ®Google Scholar
• Pedersen , K. 1993 . The deep subterranean biosphere . Earth Sci Rev , 34 : 243 – 260 .
   Web of Science ®Google Scholar
• Pedersen , K. 1997 . Microbial life in deep granitic rock . FEMS Microbiol Rev , 20 : 399 – 414 .
   Web of Science ®Google Scholar
• Pedersen , K. 2000 . Exploration of deep intraterrestrial life: current perspectives . FEMS Microbiol Lett , 185 : 9 – 16 .
   PubMed Web of Science ®Google Scholar
• Pedersen , K. 2001 . “ Diversity and activity of microorganisms in deep igneous rock aquifers of the Fennoscandian Shield ” . In Subsurface Microbiology and Biogeochemistry , Edited by: Fredrickson , J K and Fletcher , M . 97 – 139 . New York : Wiley-Liss .
   Google Scholar
• Pedersen , K. 2002 . “ Microbial processes in the disposal of high level radioactive waste 500 m underground in Fennoscandian shield rocks ” . In Interactions of Microorganisms with Radionuclides , Edited by: Keith-Roach , M J and Livens , F R . 279 – 311 . Amsterdam : Elsevier .
   Google Scholar
• Pedersen , K and Albinsson , Y . 1991 . Effect of cell number, pH and lanthanide concentration on the sorption of promethium by Shewanella putrefaciens . Radiochim Acta , 54 : 91 – 95 .
   Web of Science ®Google Scholar
• Pedersen , K and Albinsson , Y . 1992 . Possible effects of bacteria on trace element migration in crystalline bed-rock . Radiochim Acta , 58/59 : 365 – 369 .
   Web of Science ®Google Scholar
• Pedersen , K , Arlinger , J , Hallbeck , A , Hallbeck , L , Eriksson , S and Johansson , J . 2008 . Numbers, biomass and cultivable diversity of microbial populations relate to depth and borehole-specific conditions in groundwater from depths of 4 to 450 m in Olkiluoto, Finland . ISME J , 2 : 760 – 775 .
   PubMed Web of Science ®Google Scholar
• Pedersen , K , Ekendahl , S , Tullborg , E L , Furnes , H , Thorseth , I G and Tumyr , O . 1997 . Evidence of ancient life at 207 m depth in a granitic aquifer . Geology , 25 : 827 – 830 .
   PubMed Web of Science ®Google Scholar
• Phoenix , V R , Martinez , R E , Konhauser , K O and Ferris , F G . 2002 . Characterization and implications of the cell surface reactivity of Calothrix sp. strain KC97 . Appl Environ Microbiol , 68 : 4827 – 4834 .
   PubMed Web of Science ®Google Scholar
• Pokrovsky , O S , Bronikowski , M G , Moore , R C and Choppin , G R . 1998 . Interaction of neptunyl(V) and uranyl(VI) with EDTA in NaCl media: experimental study and Pitzer modeling . Radiochim Acta , 80 : 23 – 29 .
   Web of Science ®Google Scholar
• Powell , P E , Cline , G R , Reid , C PP and Szaniszlo , P J . 1980 . Occurrence of hydroxamate siderophore iron chelators in soils . Nature , 287 : 833 – 834 .
   Web of Science ®Google Scholar
• Raymond , K N , Freeman , G E and Kappel , M J . 1984 . Actinide-specific complexing agents: their structural and solution chemistry . Inorg Chim Acta , 94 : 193 – 204 .
   Web of Science ®Google Scholar
• Raymonds , K N , Müller , G and Matzanke , B F . 1984 . “ Complexation of iron by siderophores. A review of their solution and structural chemistry and biological function ” . In Topics in current chemistry , Edited by: Boschke , F L . Vol. 123 , 50 – 102 . Berlin : Springer Verlag .
   Google Scholar
• Reitner , J , Peckmann , J , Blumenberg , M , Michaelis , W , Reimer , A and Thiel , V . 2005 . Concretionary methane-seep carbonates and associated microbial communities in Black Sea sediments . Palaeogeo Palaeocl , 227 : 18 – 30 .
   Web of Science ®Google Scholar
• Renshaw , J C , Lloyd , J R and Livens , F R . 2007 . Microbial interactions with actinides and long-lived fission products . C R Chim , 10 : 1067 – 1077 .
   Web of Science ®Google Scholar
• Retrock . RETROCK Project. Treatment of geosphere retention. Phenomena in safety assessments. Scientific basis of retention processes and their implementation in safety. Assessment models (WP2) . Work Package 2 report of the RETROCK Concerted Action October 2004. R report 04-48 . Stockholm. Swedish Nuclear Fuel and Waste management Company (SKB) .
   Google Scholar
• Ruggiero , C E , Matonic , J H , Reilly , S D and Neu , M P . 2002 . Dissolution of Pu(IV)hydroxide by desferrioxamine siderophores and simple organic chelators . Inorg Chem , 41 : 3593 – 3595 .
   PubMed Web of Science ®Google Scholar
• Sandy , M and Butler , A . 2009 . Microbial iron aquisition, marine and terrestrial siderophores . Chem Rev , 109 : 4580 – 4595 .
   PubMed Web of Science ®Google Scholar
• Sar , P , Kazy , S K and D’Souza , S . 2004 . Radionuclide remediation using a bacterial biosorbant . Int Biodet Biodeg , 54 : 193 – 202 .
   Web of Science ®Google Scholar
• Sarsfield , M J , Taylor , R J , Boxall , C , Adrieux , F and Sims , H E . 2009 . Some aspects of neptunium acetohydroxamic acid chemistry under acidic conditions . Radiochim Acta , 97 : 219 – 222 .
   Web of Science ®Google Scholar
• Schäfer , H , Taraz , K and Budzikiewicz , H . 1991 . Zur Genese der amidisch an den Chromophor von Pyoverdinen gebundenen Dicarbonsäuren . Z Naturforsch [C] , 46 : 398 – 406 .
   Google Scholar
• Schulz , W W and Penneman , R A . 1986 . “ Americium ” . In The Chemistry of the Actinide Elements , Edited by: Katz , J J , Morss , L R and Seaborg , G T . Vol. 2 , 887 – 961 . New York : Chapman and Hall .
   Google Scholar
• Schwyn , B and Neilands , J . 1987 . Universal chemical assay for the detection and determination of siderophores . Anal Biochem , 160 : 47 – 56 .
   PubMed Web of Science ®Google Scholar
• Shannon , RD. 1976 . Revised effective ionic radii and systematic studies of interatomic distances in halides and chalcogenides . Acta Cryst A , 32 : 751 – 767 .
   Web of Science ®Google Scholar
• Small , T D , Warren , L A and Ferris , F G . 2001 . Influence of ionic strength on strontium sorption to bacteria, Fe(III) oxide, and composite bacteria-Fe(III) oxide surfaces . Appl Geochem , 16 : 939 – 946 .
   Web of Science ®Google Scholar
• Songkasiri , W , Reed , D and Rittmann , B . 2002 . Bio-sorption of neptunium(V) by Pseudomonas fluorescens . Radiochim. Acta , 90 : 785 – 790 .
   Web of Science ®Google Scholar
• Sparks , DL. 2005 . Toxic metals in the environment: the role of surfaces . Elements , 1 : 193 – 197 .
   Web of Science ®Google Scholar
• Stradling , GN. 1998 . Decorporation of actinides: a review of recent research . J Alloy Comp , 271–273 : 72 – 77 .
   Web of Science ®Google Scholar
• Strandberg , G and Arnold , W . 1988 . Microbial accumulation of neptunium . J Ind Microbiol , 3 : 329 – 331 .
   Google Scholar
• Stroes-Gascoyne , S , Haveman , S A , Hamon , C J and Ticknor , K V . 2000 . “ Analysis of biofilms grown in situ at AECL's underground research laboratory on granite, titanium and copper coupons. AECL-12098 ” . Mississauga, ON : Atomic Energy of Canada Limited .
   Google Scholar
• Stumm , W and Morgan , J J . 1996 . Aquatic Chemistry: Chemical Equilibria and Rates in Natural Waters , 3rd ed. , New York : Wiley .
   Google Scholar
• Takahashi , Y , Chatellier , X , Hattori , K H , Kato , K and Fortin , D . 2005 . Adsorption of rare earth elements onto bacterial walls and its implication for REE sorption onto natural microbial mats . Chem Geol , 219 : 53 – 67 .
   Web of Science ®Google Scholar
• Takenaka , Y , Saito , T , Nagasaki , S and Satoru , T . 2007 . Metal sorption to Pseudomonas fluorescens: influence of pH, ionic strength and metal concentrations . Geomicro J , 24 : 205 – 210 .
   Web of Science ®Google Scholar
• Tsuruta , T. 2002 . Removal and recovery of uranyl ion using various microorganisms . J Biosci Bioeng , 94 : 23 – 28 .
   PubMed Web of Science ®Google Scholar
• Tullborg , EL. 1995 . “ Mineralogical and chemical data on rocks and fracture minerals from Äspö ” . SKB Technical Note 25-95-07g Stockholm : Swedish Nuclear Fuel and Waste Manangement Company (SKB) .
   Google Scholar
• Tullborg , E L , Landstrom , O and Wallin , B . 1999 . Low-temperature trace element mobility influenced by microbial activity: indications from fracture calcite and pyrite in crystalline basement . Chem Geol , 157 : 199 – 218 .
   Web of Science ®Google Scholar
• Vandergraaf , T T , Drew , T J , Archambault , D and Ticknor , K V . 1997a . Transport of radionuclides in natural fractures: some aspects of laboratory migration experiments . J Contam Hydrol , 26 : 83 – 95 .
   Web of Science ®Google Scholar
• Vandergraaf , T T , Miller , H G , Jain , D K , Hamon , C J and Stroes-Gascoyne , S . 1997b . “ The effect of biofilms on radionuclide transport in the geosphere: results from an initial investigation ” . Technical report TR-774 Mississauga, ON : Atomic Energy of Canada Limited .
   Google Scholar
• Waite , T D , Davis , J A , Payne , T E , Waychunas , G A and Xu , N . 1994 . U(VI) adsorption to ferrihydrite: application of a surface complexation model . Geochim Cosmochim Acta , 58 : 5465 – 5478 .
   Web of Science ®Google Scholar
• Wang , L , Maes , A , De Canniere , J and Van der Lee , J . 1998 . Sorption of Eu(III) on illite . Radiochim Acta , 82 : 233 – 238 .
   Web of Science ®Google Scholar
• Warren , L A and Ferris , F G . 1998 . Continuum between sorption and precipitation of Fe(III) on microbial surfaces . Environ Sci Technol , 32 : 2331 – 2337 .
   Web of Science ®Google Scholar
• Warren , L and Zimmerman , A . 1994 . Suspended particulate oxides and organic matter interactions in trace metal sorption reactions in a small urban river . Biogeochem , 23 : 21 – 34 .
   Google Scholar
• Wilkins , M J , Livens , F R , Vaughan , D J , Beadle , T and Lloyd , J R . 2007 . The influence of microbial redox cycling on radionuclide mobility in the subsurface at a low-level radioactive waste storage site . Geobiology , 5 : 293 – 301 .
   Web of Science ®Google Scholar
• Winkelmann , G. 1991 . Handbook of Microbial Iron Chelates , 366 Boca Raton, FL : CRC Press .
   Google Scholar
• Wolff-Boenisch , D and Traina , S J . 2006 . A comparative study of the effect of desferrioxamine B, oxalic acid, and Na-alginate on the desorption of U(VI) from goethite at pH 6 and 25°C . Geochim Cosmochim Acta , 70 : 4356 – 4366 .
   Web of Science ®Google Scholar
• Wolff-Boenisch , D and Traina , S J . 2007 . The effect of desferrioxamine B on the desorption of U(VI) from Georgia kaolinite KGa-1b and its ligand-promoted dissolution at pH 6 and 25°C . Chem Geol , 242 : 278 – 287 .
   Web of Science ®Google Scholar
• Xu , C , Santchi , P , Zhong , J , Hatcher , P , Francis , A J , Dodge , C J , Roberts , K A , Hung , C C and Honeyman , B D . 2008 . Colloidal cutin-like substances cross-linked to siderophore decomposition products mobilizing Pu from contaminated soils . Environ Sci Technol , 42 : 8211 – 8217 .
   PubMed Web of Science ®Google Scholar
• Yee , N , Fowle , D A and Ferris , F G . 2004 . A Donnan potential model for metal adsorption onto Bacillus subtilis . Geochim Cosmochim Acta , 68 : 3657 – 3664 .
   Web of Science ®Google Scholar
• Yoshida , T , Ozaki , T , Ohnuki , T and Francis , A J . 2004 . Adsorption of rare earth elements by γ-Al2O3 and Pseudomonas fluorescens cells in the presence of desferrioxamine B: implication of siderophores for the Ce anomaly . Chem Geol , 212 : 239 – 246 .
   Web of Science ®Google Scholar
• Zachara , J M , Resch , C T and Smith , S C . 1994 . Influence of humic substances on Co2+ sorption by a subsurface mineral separate and its mineralogical components . Geochim Cosmochim Acta , 58 : 553 – 556 .
   Web of Science ®Google Scholar