520
Views
29
CrossRef citations to date
0
Altmetric
Original Articles

Carbonate Precipitation of Bacterial Strains Isolated from Sediments and Seawater: Formation Mechanisms

, , , , , & show all
Pages 840-850 | Received 01 Dec 2012, Accepted 01 Feb 2013, Published online: 17 Jul 2013

References

  • Ahimou , F , Denis , F A , Touhami , A and Dufrene , Y F . 2002 . Probing microbial cell surface charges by atomic force microscopy . Langmuir , 18 : 9937 – 9941 .
  • Aizenman , E , Engelberg-Kulka , H and Glaser , G . 1996 . An Escherichia coli chromosomal addiction module regulated by 3, 5 -bispyrophosphate: a model for programmed bacterial cell death . Proc Natl Acad Sci USA , 93 : 6059 – 6063 .
  • Alber , B E and Ferry , JG. 1994 . A carbonic anhydrase from the archaeon Methanosarcina thermophila . Proc Natl Acad Sci USA , 91 : 6909 – 6913 .
  • Allen , C C , Albert , F G , Chafetz , H S , Combie , J and Graham , C R . 2000 . Microscopic physical biomarkers in carbonate hot springs: implications in the search for life on Mars . Icarus , 147 : 49 – 67 .
  • Aloisi , G , Gloter , A , Krüger , M , Wallman , K , Guyot , F and Zuddas , P . 2006 . Nucleation of calcium carbonate on bacterial nanoglobules . Geology , 34 : 1017 – 1020 .
  • Bond , G M , Stringer , J , Brandvold , D K , Simsek , F A , Medina , M G and Egeland , G . 2001 . Development of integrated system for biomimetic CO2 sequestration using the enzyme carbonic anhydrase . Energ Fuel , 15 : 309 – 316 .
  • Booker , N A , Priestley , A J and Fraser , I H . 1999 . Struvite formation in wastewater treatment plants: opportunities for nutrient recovery . Environ Technol , 20 : 777 – 782 .
  • Braissant , O , Cailleau , G , Dupraz , C and Verrecchia , A P . 2003 . Bacterially induced mineralization of calcium carbonate in terrestrial environment: the role of exopolysaccharides and amino-acids . J Sediment Res , 73 : 485 – 490 .
  • Buczynski , C and Chafetz , H S . 1991 . Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy . J Sediment Res , 61 : 226 – 233 .
  • Castanier , S , Le Métayer-Levrel , G and Perthuisot , J P . 1999 . Ca-carbonate precipitation and limestone genesis the microbiologist point of view . Sediment Geol , 126 : 9 – 23 .
  • Delgado , G , Delgado , R , Párraga , J , Rivadeneyra , M A and Aranda , V . 2008 . Precipitation of carbonates and phosphates by bacteria in extract Solutions from a semi-arid saline soil. Influence of Ca2+ and Mg2+concentrations and Mg2+/Ca2+ molar ratio in biomineralization . Geomicrobiol J , 25 : 1 – 13 .
  • Desrosiers , M G , Gately , L J , Gambel , A M and Menick , D R . 1996 . Purification and characterisation of the Ca2 +ATPase of Flavobacterium odoratum . J Biol Chem , 271 : 3945 – 3951 .
  • Dupraz , C , Visscher , P T , Baumgartner , L K and Reid , R P . 2004 . Microbe–mineral interactions: early carbonate precipitation in a hypersaline lake (Eleuthera Island, Bahamas) . Sedimentology , 51 : 745 – 765 .
  • Ehrlich , L and Newman , D K . 2009 . Geomicrobiology. 5th ed , Boca Raton , FL : CRC Press (Taylor & Francis Group) .
  • Hammes , F and Verstraete , W . 2002 . Key roles of pH and calcium metabolism in microbial carbonate precipitation . Rev Environ Sci Biotechnol , 1 : 3 – 7 .
  • Hopkinson , B M , Dupont , C L , Allen , A E and Morel , FMM. 2011 . Efficiency of the CO2-concentrating mechanism of diatoms . Proc Natl Acad Sci USA , 108 : 3830 – 3837 .
  • Krumbein , W. 1979 . Phototrophic and chemoorganotrophic activity of bacteria and algae as related to beach rock formation and degradation (Gulf of Agaba, Sinai) . Geomicrobiol J , 1 : 139 – 203 .
  • Kucharski , E S , Cord-Ruwisch , R , Whiffin , V and Al-Thawadi , S MJ . 2006 . Microbial biocementation . World Intellectual Property Organization, WO2006/066326 A1
  • Liu , N , Bond , G M , Abel , A , McPherson , B J and Stringer , J . 2005 . Biomimetic sequestration of CO2 in carbonate form: Role of produced waters and other brines . Fuel Process Technol , 86 : 1615 – 1625 .
  • Lytle , D A , Johnson , C H and Rice , E W . 2002 . A systematic comparison of the electrokinetic properties of environmentally important microorganism in water . Coll Surf B Biointerf , 24 : 91 – 101 .
  • Maier , R M , Pepper , I L and Gerba , ChP . 2000 . Environmental Microbiology , San Diego , CA : Academic Press .
  • Martin , JD. 2004 . Using XPowder a sofware package for powder X-ray diffraction analysis . D.L.GR-1001/04, Spain. http://www.xpowder.com/. Accessed May 31, 2010
  • McConnaughey , T A and Whelan , F F . 1997 . Calcification generates protons for nutrient and bicarbonate uptake . Earth-Sci Rev , 42 : 95 – 117 .
  • McKay , D S , Thomas-Keptra , K L , Romanek , C S , Gibson , E K Jr and Vali , H . 1996 . Evaluating the evidence for past life on Mars . Science , 274 : 2123 – 2124 .
  • Mirjafari , P , Asghari , K and Mahinpey , N . 2007 . Investigating the application of enzyme carbonic anhydrase for CO2 sequestration purposes . Ind Eng Chem Res , 46 : 921 – 926 .
  • Naganuma , T , Yukimura , K , Todaka , N and Ajimac , S. 2011 . Concept and experimental study for a new enhanced mineral trapping system by means of microbially mediated processes . Energy Procedia , 4 : 5079 – 5084 .
  • Norris , V , Grant , S , Freestone , P , Canvin , J , Sheikh , F N , Toth , I , Trinei , M , Modha , K and Norman , N . 1996 . Calcium signalling in bacteria . J Bacteriol , 178 : 3677 – 3682 .
  • Page , A L , Miller , R H and Keeny , D R . 1982 . Methods of Soil Analysis, Part 2, Chemical and Microbiological Properties. Madison, WI: American Society of Agronomy and Soil Science Society of America . : 1159
  • Parkhust , D L and Appelo , C AJ . 1999 . “ User's guide to PHREEQC (Version 2). A computer program for speciation, batch-reaction, one-dimensional transport and inverse geochemical calculations ” . In Water Resources Investigations Report 99–4259 , Denver , CO : U.S. Geological Survey .
  • Párraga , J , Rivadeneyra , M A , Martín-García , J M , Delgado , R and Delgado , G . 2004 . Precipitation of carbonates by bacteria from a saline soil, in natural and artificial soil extracts . Geomicrobiol J , 21 : 55 – 66 .
  • Peckmann , J , Paul , J and Thiel , V . 1999 . Bacterially mediated formation of diagenetic aragonite and nature sulfur in Zechstein carbonates (Upper Permian, Central Germany) . Sediment Geol , 126 : 205 – 222 .
  • Prescott , L M , Harley , J P and Klein , D A . 2008 . Microbiología, 7th edition , Madrid : McGraw Hill .
  • Quiroga , O and González , E L . 1993 . Carbonic anhydrase in the chloroplast of a Coccolithophorid (Prymnesiophyceae) . J Phycol , 29 : 321 – 324 .
  • Ramanan , R , Krishnamurthi , K , Devi Sivanesan , S , Sandeep , M , Simarjot , K , Tripathi , A and Tapan , C . 2009 . Bio-sequestration of carbon dioxide using carbonic anhydrase enzyme purified from Citrobacter freundii . World J Microbiol Biotechnol , 25 : 981 – 987 .
  • Reitner , J. 1993 . Modern cryptic microbialite/metazoan facies from Lizard Island (Great Barrier Reef, Australia): Formation and concepts . Facies , 29 : 3 – 40 .
  • Rivadeneyra , M A , Delgado , G , Soriano , M , Ramos-Cormenzana , A and Delgado , R . 1999 . Biomineralization of carbonates by Marinococcus albus and Marinococcus halophilus isolated from the Salar de Atacama (Chile) . Curr Microbiol , 39 : 53 – 57 .
  • Rivadeneyra , M A , Delgado , G , Soriano , M , Ramos-Cormenzana , A and Delgado , R . 2000 . Precipitation of carbonates by Nesterenkonia halobia in liquid media . Chemosphere , 41 : 617 – 624 .
  • Rivadeneyra , M A , Martín-Algarra , A , Sánchez-Navas , A and Martín-Ramos , D . 2006 . Carbonate and phosphate precipitation by Chromohalobacter marismortui . Geomicrobiol J , 23 : 1 – 13 .
  • Rivadeneyra , M A , Martín-Algarra , A , Sánchez-Román , M , Sánchez-Navas , A and Martín-Ramos , D . 2010 . Amorphous Ca-phosphate precursors for Ca-carbonate biominerals mediated by Chromohalobacter marismortui . ISME J , 4 : 922 – 932 .
  • Rivadeneyra , M A , Párraga , J , Delgado , R , Ramos-Cormenzana , A and Delgado , G . 2004 . Biomineralization of carbonates by Halobacillus trueperi in solid and liquid media with different salinities . FEMS Microbiol Ecol , 48 : 39 – 46 .
  • Rivadeneyra , M A , Ramos-Cormenzana , A , Delgado , G and Delgado , R . 1996 . Process of carbonate precipitation by Deleya halophila . Curr Microbiol , 32 : 308 – 313 .
  • Rodriguez-Navarro , C , Rodriguez-Gallego , M , Chekroun , K B and Gonzalez-Munoz , M T . 2003 . Conservation of ornamental stone by Myxococcus xanthus induced carbonate biomineralization . Appl Environ Microbiol , 69 : 2182 – 2193 .
  • Rosen , BP. 1987 . Bacterial calcium transport . Biochim Biophys Acta , 906 : 101 – 110 .
  • Sánchez-Moral , L , Cañavas , J C , Laiz , L , Jurado , V , Hermosin , B and Saiz-Jimenez , C . 2003 . Bioinduced precipitation of calcium carbonate metastable phases in hypogean environments: a short review . Geomicrobiol J , 20 : 491 – 500 .
  • Schultze-Lam , S , Fortin , D , Davis , B S and Beveridge , T J . 1996 . Mineralisation of bacterial surfaces . Chem Geol , 132 : 171 – 181 .
  • Sharma , A , Bhattacharya , A , Pujari , R and Shrivastava , A . 2008 . Characterization of carbonic anhydrase from diversified genus for biomimetic carbon-dioxide sequestration . Ind J Microbiol , 48 : 365 – 371 .
  • Smith , K S and Ferry , J G . 2000 . Prokaryotic carbonic anhydrases . FEMS Microbiol Rev , 24 : 335 – 366 .
  • Tamburri , M N , Peltzer , E T , Friederich , G E , Aya , I , Yamane , K and Brewer , P G . 2000 . A field study of the effect of CO2 ocean disposal on mobile deep-sea animals . Mar Chem , 72 : 95 – 101 .
  • Uad , I , Silva-Castro , G A , Pozo , C , González-López , J and Calvo , C . 2010 . Biodegradative potential and characterization of bioemulsifiers of marine bacteria isolated from samples of seawater, sediment and fuel extracted at 4000 m of depth (Prestige wreck) . Int Biodeter Biodegr , 64 : 511 – 518 .
  • Williams , S. 1999 . Struvite precipitation in the sludge stream at Slough wastewater treatment plant and opportunities for phosphorus recovery . Environ Technol , 20 : 743 – 748 .
  • Wolt , JD. 1994 . Soil Solution Chemistry: Applications to Environmental Science and Agriculture , 345 New York : Wiley .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.