Biomineralization, Bioremediation and Biorecovery of Toxic Metals and Radionuclides

References

• Blasi B, Poyntner C, Rudavsky T, Prenafeta-Boldu FX, de Hoog S, Tafer H, Sterflinger K. 2016. Pathogenic yet environmentally friendly? Black fungal candidates for bioremediation of pollutants. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Boswell CD, Dick RE, Eccles H, Macaskie LE. 2001. Phosphate uptake and release by Acinetobacter johnsonii in continuous culture and coupling of phosphate release to heavy metal accumulation. J Ind Microbiol Biotechnol 26: 333–340.
   PubMed Web of Science ®Google Scholar
• Brookshaw DR, Lloyd JR, Vaughan DJ, Pattrick RAD. 2016. Effects of microbial Fe(III) reduction on the sorption of Cs and Sr on biotite and chlorite. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Burbank MB, Weaver TJ, Green TL, Williams BC, Crawford RL. 2011. Precipitation of calcite by indigenous microorganisms to strengthen liquefiable soils. Geomicrobiol J 28:301–312.
   Web of Science ®Google Scholar
• Chen F, Deng C, Song W, Zhang D, Al-Misned FA, Golam Mortuz M, Gadd GM, Pan X. 2016. Biostabilization of desert sands using bacterially-induced calcite precipitation. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• De Muynck W, De Belie N, Verstraete W. 2010. Microbial carbonate precipitation in construction materials: a review. Ecol Eng 36: 99–111.
   Web of Science ®Google Scholar
• Ferris FG, Enright AML, Fortin D, Clark ID. 2016. Rates of Fe(II)-oxidation and solubility of bacteriogenic iron oxides. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Fomina M, Gadd GM. 2014. Biosorption: current perspectives on concept, definition and application. Biores Technol 160: 3–14.
   PubMed Web of Science ®Google Scholar
• Foulkes JM, Deplanche K, Sargent F, Macaskie LE, Lloyd JR. 2016. A novel aerobic mechanism for reductive palladium biomineralization and recovery by Escherichia coli. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Fujita Y, Redden GD, Ingram JC, Cortez MM, Ferris FG, Smith RW. 2004. Strontium incorporation into calcite generated by bacterial ureolysis. Geochim Cosmochim Acta 68:3261–3270.
   Web of Science ®Google Scholar
• Gadd GM. 2007. Geomycology: biogeochemical transformations of rocks, minerals, metals and radionuclides by fungi, bioweathering and bioremediation. Mycol Res 111: 3–49.
   PubMed Web of Science ®Google Scholar
• Gadd GM. 2009. Biosorption: critical review of scientific rationale, environmental importance and significance for pollution treatment. J Chem Technol Biotechnol 84:13–28.
   Web of Science ®Google Scholar
• Gadd GM. 2010. Metals, minerals and microbes: geomicrobiology and bioremediation. Microbiology 156: 609–643.
   PubMed Web of Science ®Google Scholar
• Gadd GM, Bahri-Esfahani J, Li Q, Rhee YJ, Wei Z, Fomina M, Liang X. 2014. Oxalate production by fungi: significance in geomycology, biodeterioration and bioremediation. Fungal Biol Rev 28: 36–55.
   Web of Science ®Google Scholar
• Gadd GM, Raven JA. 2010. Geomicrobiology of eukaryotic microorganisms. Geomicrobiol J 27:491–519.
   Web of Science ®Google Scholar
• Gadd GM, Rhee YJ, Stephenson K, Wei Z. 2012. Geomycology: metals, actinides and biominerals. Environ Microbiol Repts 4: 270–296.
   PubMed Web of Science ®Google Scholar
• Gangappa R, Yong P, Singh S, Mikheenko I, Murray AJ, Macaskie LE. 2016. Hydroxyapatite biosynthesis by a Serratia sp. and application of nanoscale bio-HA in the recovery of strontium and europium. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Hao J, Lian B, Liu H, Lu X. 2016. The release of phosphorus from sediment to lake water induced by cyanobacterial blooms and phosphorus removal by cell harvesting. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Holland SL, Dyer PS, Bond CJ, James SA, Roberts IN, Avery SV. 2011. Candida argentea sp. nov., a copper and silver resistant yeast species. Fungal Biol 115: 909–918.
   PubMed Web of Science ®Google Scholar
• Kaewdoung B, Sutjaritvorakul T, Gadd GM, Whalley AJS, Sihanonth P. 2016. Heavy metal tolerance and biotransformation of toxic metal compounds by new isolates of wood-rotting fungi from Thailand. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Li B, Deng C, Zhang D, Pan X, Al-Misned FA, Golam Mortuza M. 2016. Bioremediation of nitrate and arsenic contaminated groundwater using nitrate-dependent Fe(II) oxidizing bacterium Clostridium sp. strain PXL2. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Li L, Song W, Deng C, Zhang D, Al-Misned FA, Golam Mortuz M, Gadd GM, Pan X. 2016. Effects of pH and salinity on adsorption of hypersaline photosynthetic microbial mat exoploymers to goethite: a study using a quartz crystal microbalance and fluorescence spectroscopy. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Li Q, Csetenyi L, Gadd GM. 2014. Biomineralization of metal carbonates by Neurospora crassa. Environ Sci Technol 48: 14409–14416.
   PubMed Web of Science ®Google Scholar
• Li Q, Csetenyi L, Paton GI, Gadd GM. 2016. CaCO3 and SrCO3 bioprecipitation by fungi isolated from calcareous soil. Environ Microbiol (17: 3082–3097.).
   Web of Science ®Google Scholar
• Liang, X, Hillier S, Pendlowski H, Gray N, Ceci A, Gadd GM. 2016a. Uranium phosphate biomineralization by fungi. Environ Microbiol 17:2064–2075.
   Web of Science ®Google Scholar
• Liang X, Kierans M, Ceci A, Hillier S, Gadd GM. 2016b. Phosphatase-mediated bioprecipitation of lead by soil fungi. Environ Microbiol (in press).
   PubMed Web of Science ®Google Scholar
• Liang X., Csetenyi L, Gadd GM. 2016. Lead bioprecipitation by yeasts utilizing organic phosphorus substrates. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Lloyd JR, Gadd GM. 2011. The geomicrobiology of radionuclides. Geomicrobiol J 28:383–386.
   Web of Science ®Google Scholar
• Macaskie LE, Bonthrone KM, Yong P, Goddard DT. 2000. Enzymically mediated bioprecipitation of uranium by a Citrobacter sp.: a concerted role for exocellular lipopolysaccharide and associated phosphatase in biomineral formation. Microbiol 146:1855–1867.
   PubMed Web of Science ®Google Scholar
• Macaskie LE, Empson RM, Cheetham AK, Grey CP, Skarnulis AJ. 1992. Uranium bioaccumulation by a Citrobacter sp. as a result of enzymatically mediated growth of polycrystalline HUO2PO4. Science 257:782–784.
   PubMed Web of Science ®Google Scholar
• Paterson-Beedle M, Readman JE, Hriljac JA, Macaskie LM. 2010. Biorecovery of uranium from aqueous solutions at the expense of phytic acid. Hydrometallurgy 104:524–528.
   Web of Science ®Google Scholar
• Rhee YJ, Hillier S, Gadd GM. 2012. Lead transformation to pyromorphite by fungi. Curr Biol 22:237–241.
   PubMed Web of Science ®Google Scholar
• Rhee YJ, Hillier S, Gadd GM. 2016. A new lead hydroxycarbonate produced during transformation of lead metal by the soil fungus Paecilomyces javanicus. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Rhee YJ, Hillier S, Pendlowski H, Gadd GM. 2014a. Pyromorphite formation in a fungal biofilm community growing on lead metal. Environ Microbiol 16:1441–1451.
   PubMed Web of Science ®Google Scholar
• Rhee YJ, Hillier S, Pendlowski H, Gadd GM. 2014b. Fungal transformation of metallic lead to pyromorphite in liquid medium. Chemosphere 113:17–21.
   PubMed Web of Science ®Google Scholar
• Song W, Deng C, Pan X, Zhang D, Al-Misned FA, Golam Mortuz M, Gadd GM. 2016. Effects of pH shock on Hg(II) complexation by exopolymers from Acidithiobacillus ferrooxidans. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Sutjaritvorakul T, Gadd GM, Whalley AJS, Suntornvongsagul K, Sihanonth P. 2016. Zinc oxalate crystal formation by Aspergillus nomius. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Thorpe CL, Lloyd JR, Law GTW, Williams HA, Atherton N, Cruickshank JH, Morris K. 2016. Retention of 99mTc at ultra-trace levels in flowing column experiments – Insights into bioreduction and biomineralization for remediation at nuclear facilities. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Wang X, Chen C, Wang J. 2016. Bioremediation of cesium contaminated soil by Sorghum bicolor and soil microbial community analysis. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Wang Y, Chai L, Liao Q, Tang C, Liao Y, Peng B, Yang Z. 2016. Structural and genetic diversity of hexavalent chromium resistant bacteria in contaminated soil. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• White C, Sharman AK, Gadd GM. 1998. An integrated microbial process for the bioremediation of soil contaminated with toxic metals. Nat Biotechnol 16:572–575.
   PubMed Web of Science ®Google Scholar
• Xie E, Ding A, Zheng L, Lu C, Wang J, Huang B, Xiu H. 2016. Seasonal variation in populations of nitrogen-transforming bacteria and correlation with nitrogen removal in a full scale horizontal flow constructed wetland treating polluted river water. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Yang J, Pan X, Mou S, Achal V, Al-Misned FA, Golam Mortuz M, Gadd GM. 2016. Bioimmobilization of heavy metals in acidic copper mine tailings soil. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Yang Y, Wang J, Huang Q, Xin Y, Song Y, Xin B. 2016. Screening bioleaching systems and operational conditions for optimal Ni recovery from dry electroplating sludge and exploration of the leaching mechanisms involved. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Zhang D, Wang J, Zhao J, Cai Y, Lin Q. 2016. Comparative study of nickel removal from synthetic wastewater by a sulfate-reducing bacteria filter and a zero valent iron-sulfate reducing bacteria filter. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Zhang Y, Liu X, Xin B, Chen S, Huang, Q. 2016. Extracellular biosynthesis of high purity γ-MnS by the sulfate-reducing bacterium Anaerofilum sp. through selective precipitation of a Mn2+-eriochrome black T chelate complex. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar
• Zhu W, Xu X, Xia L, Huang Q, Chen W. 2016. Comparative analysis of mechanisms of Cd2+ and Ni2+ biosorption by living and non-living Mucoromycote sp. XLC. Geomicrobiol J (this issue).
   PubMed Web of Science ®Google Scholar