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Articles

Reproducing Authigenic Carbonate Precipitation in the Hypersaline Lake Acıgöl (Turkey) with Microbial Cultures

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Pages 758-773 | Received 01 Feb 2015, Accepted 01 Sep 2015, Published online: 17 May 2016

References

  • Alçiçek H. 2009. Late Miocene nonmarine sedimentation and formation of magnesites in the Acıgöl Basin, southwestern Anatolia, Turkey. Sediment Geol 219:115–135.
  • Alçiçek MC, Kazanci N, Özkul M. 2005. Multiple rifting pulses and sedimentation pattern in the Çameli Basin, southwestern Anatolia, Turkey. Sediment Geol 173:409–431.
  • Allen CC, Albert FG, Chafetz HS, Combie J, Graham CR, Kieft TL, Kivett SJ, McKay, DS, Steele A, Taunton AE, Taylor MR, Thomas-Keprta KL, Westall F. 2000. Microscopic physical biomarkers in carbonate hot springs: Implications in the search of life on Mars. Icarus 147:49–67.
  • Arvidson RS, Collier M, Davis KJ, Vinson MD, Amonette JE, L€uttge A. 2005. Magnesium inhibition of calcite dissolution kinetics. Geochim Cosmochim Acta 70:583–594.
  • Baker PA, Burns SJ. 1985. Occurrence and formation of dolomite in organic-rich continental margin sediments. Am Assoc Pet Geol Bull 69:1917–1930.
  • Bontognali TRR, McKenzie JA, Warthmann RJ, Vasconcelos C. 2013. Microbially influenced formation of Mg-calcite and Ca-dolomite in the presence of exopolymeric substances produced by sulfate-reducing bacteria. Terra Nova 26(1):72–77.
  • Braissant O, Cailleau G, Dupraz C, Verrechia APJ. 2003. Bacterially induced mineralization of calcium carbonate in terrestrial environment: The role of exopolysaccharides and amino acids. J Sediment Res 73:485–490.
  • Braissant O, Decho AW, Dupraz C, Glunk C, Przekop KM, Visscher PT. 2007. Exopolymeric substances of sulfate-reducing bacteria: Interactions with calcium at alkaline pH and implication for formation of carbonate minerals. Geobiology 5:401–411.
  • Buczynski C, Chafetz HS. 1991, Habit of bacterially induced precipitates of calcium carbonate and the influence of medium viscosity on mineralogy. J Sediment Petrol 61:226–233.
  • Castanier S, Le Metayer-Levrel G, Perthuisot JP. 1999. Ca-carbonates precipitation and limestone genesis - the microbiologist point of view. Sediment Geol 126:9–23.
  • Cölfen H, Qi L. 2001. A systematic examination of the morphogenesis of calcium carbonate in the presence of a double-hydrophilic block copolymer. Chem–Eur J 1:106–116.
  • Des Marais DJ. 1995. The biogeochemistry of hypersaline microbial mats. In: Jones JG, editor. Advanced in Microbial Ecology. New York: Plenum, pp251–274.
  • Dupraz C, Visscher PT, Baumgartner LK, Reid RP. 2004. Microbe–mineral interactions: Early carbonate precipitation in a hypersaline lake (Eleuthera Island, Bahamas). Sedimentology 51:745–765.
  • Ehrlich HL. 2002. Geomicrobiology. 4th ed. New York: Marcel Dekker, pp 768.
  • Fernández-Díaz L, Astilleros JM, Pina CM. 2006. The morphology of calcite crystals grown in a porous medium doped with divalent cations. Chem Geol 225:314–321.
  • Ferrer MR, Quevedo-Sarmiento J, Rivadeneyra MA, Béjar V, Delgado R, Ramos-Cormenzana A. 1988. Calcium carbonate precipitation by two groups of moderately halophilic microorganisms at different temperatures and salts concentrations. Curr Microbiol 17:221–227.
  • Friedman GM, Sanders JE. 1967. Origin and occurrence of dolostones. In: Chilingar GV, Bissell HJ, Fairbridge RW, editors. Carbonate Rocks. Amsterdam: Elsevier, pp267–348.
  • Gonzalez-Muñoz MT, Ben Chekroun K, Ben Aboud A, Arias JM, Rodriguez-Gallego M. 2000. Bacterially induced Mg-calcite formation. Role of Mg2+ in development of crystal morphology. J Sediment Res 70:559–564.
  • González-Muñoz MT, De Linares C, Martinez-Ruiz F, Morcillo F, Martin-Ramos D, Arias JM. 2008. Ca-Mg kutnahorite and struvite production by Idiomarina strains at modern seawater salinities. Chemosphere 72:465–472.
  • Helvacı C, Alçiçek C, Gündoğan İ1, Gemici U. 2012. Tectonosedimentary development and palaeoenvironmental changes in the Acıgöl shallow-perennial Playa-Lake Basin, SW Anatolia, Turkey. Turkish J Earth Sci 21:1–20.
  • Helvacı C, Gündoğan İ, Gemici Ü, Alçiçek MC. 2010. Acıgöl (Denizli). Havzasının Jeolojik, Hidrojeolojik, Mineralojik Evrimi ve Na-Sülfat Potansiyeli: Dokuz. Eylül University & ALKIM-SODAŞ Cooperative project report, İzmir, pp 300.
  • Hsü KJ, Ryan WBF, Cita MB. 1973. Late Miocene desiccation of the Mediterranean. Nature 424:240–244.
  • Jiménez-López C, Romanek CS, Caballero E. 2006. Carbon isotope fractionation in synthetic magnesian calcite. Geochim Cosmochim Ac 70:1163–1171.
  • Jones MB, Donnelly A. 2004. Carbon sequestration in temperate grassland ecosystems and the influence of management, climate and elevated CO2. New Phytol 164:423–439.
  • Karaman M, Budakoglu M, Avci DU, Ozelkan E, Bulbul A, Civaş M, Tasdelen S. 2015. Determination of seasonal changes in wetlands using CHRIS/Proba Hyperspectral Satellite Images: A case study from Acigol (Denizli), Turkey. J Environ Biol 36:73–83.
  • Kenward PA, Goldsteın RH, Gonzalez LA, Roberts JA. 2009. Precipitation of low-temperature dolomite from an anaerobic microbial consortium: The role of methanogenic Archaea. Geobiology 7(5):556–565.
  • Krause S, Liebetrau V, Gorb SN, Sánchez-Román M, McKenzie JA, Treude T. 2012. Microbial nucleation of Mg-rich dolomite in exopolymeric substances (EPS) under anoxic modern seawater salinity: New insight into an old enigma. Geology 40:587–590.
  • Kuo S. 1996. Phosphorus. In Sparks DL et al., editor. Methods of Soil Analysis, Part 3: Chemical Methods. Madison, WI: Soil Science Society of America, p894–895.
  • Ma Y, Galinski EA, Grant WD, Oren A. 2010. Halophiles life in saline environments. Appl Environ Microbiol 76:6971.
  • Mavromatis V, Pearce CR, Shirokova LS, Bundeleva IA, Pokrovsky OS, Benezeth P, Oelkers EH. 2012. Magnesium isotope fractionation during hydrous magnesium carbonate precipitation with and without cyanobacteria. Geochim Cosmochim Ac 76:161–174.
  • McKenzie JA, Ricchiuto TE. 1978. Stable isotopic investigation of carbonate samples related to the Messinian salinity crisis from DSDP Leg 42A, Mediterranean Sea. In Hsü K, Montadert L, et al., editors. Initial Reports of the Deep Sea Drilling Project. Vol. 42A. Washington: U.S. Govt. Printing Office, pp 651–655.
  • Meister P, Johnson O, Corsetti F, Nealson KH. 2011a. Magnesium inhibition controls spherical carbonate precipitation in ultrabasic springwater (Cedars, California) and culture experiments. In: Reitner J, Que´ric NV, Arp G, editors. Advances in Stromatolite Geobiology. Lect Notes Earth Sci 131:101–122.
  • Meister P, McKenzie JA, Bernasconi SM, Brack P. 2013. Dolomite formation in the shallow seas of the Alpine Triassic. Sedimentology 60:270–291.
  • Meister P, Reyes C, Beaumont W, Rincon M, Collins L, Berelson W, Stott L, Corsetti F, Nealson KH. 2011b. Calcium and magnesium-limited dolomite precipitation at Deep Springs Lake, California. Sedimentology 58:1810–1830.
  • Mutlu H, Kadir S, Akbulut A. 1999. Mineralogy and water chemistry of the Lake Acıgöl (Denizli), Turkey. Carbonate Evaporite 14:91–99.
  • Ohmoto H, Rye RO. 1979. Isotopes of sulfur and carbon. In: Barnes HL, editor. Geochemistry of Hydrothermal Ore Deposits. Ch. 10. New York: Wiley, 2nd ed., pp 509–567.
  • Oren A. 2002. Diversity of halophilic microorganisms: Environments, phylogeny, physiology, and applications. J Ind Microbiol Biotechnol 28:56–63.
  • Ozelkan E, Bagis S, Ustundag B, Ozelkan E, Yucel M, Ormeci C. 2013. Land surface temperature based spatial interpolation using a modified inverse distance weighting method. In: Proceedings of the Second International Conference on Agro-Geoinformatics (Agro Geoinformatics) IEEE. Fairfax, VA, USA, 12–16 August, pp 110–115.
  • Paerl HW, Pinckney JL, Steppe TF. 2000. Cyanobacterial-bacterial mat consortia: Examining the functional unit of microbial survival and growth in extreme environments. Environ Microbiol 2:11–26.
  • Page AL, Miller RH, Keeny DR. (eds) 1982. Methods of Soil Analysis, Part 2, Chemical and Microbiological Properties. 2nd ed. Madison, Wisconsin: American Society of Agronomy and Soil Science Society of America, pp 160–161.
  • Parkhurst D, Appelo CAJ. 1999. User's guide to PhreeqC (Version 2) – a computer program for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations. Water-Resources Investigations Report 99–4259, U.S. Department of the interior, Denver, Colorado.
  • Raz, S., S. Weiner, and L. Addadi. 2000. Formation of high-magnesian calcites via an amorphous precursor phase: possible biological implications. Adv. Mater. 12:38–42.
  • Reid RP, Visscher PT, Decho AW, Stolz JF, Bebout BM, Dupraz C, Macintyre IG, Paerl HW, Pickney JL, Prufert-Bebout L, Steppe TF, Des Marais DJ. 2000. The role of microbes in accretion, lamination and early lithification of modern marine stromatolites. Nature 406:989–992.
  • Riding RE. 2000. Microbial carbonates: The geological record of calcified bacteria-algal mats and biofilms. Sedimentology 47:179–214.
  • Rivadeneyra MA, Delgado G, Ramos-Cormenzana A, Delgado R. 1997, Precipitation of carbonates by Deleya halophila in liquid media: Pedological implications in saline soils. Arid Soil Res Rehabil 11:35–49.
  • Rivadeneyra MA, Delgado G, Ramos-Cormenzana A, Delgado R. 1998. Biomineralization of carbonates by Halomonas eurihalina in solid and liquid media with different salinities: Crystal formation sequence. Res Microbiol 149:277–286.
  • Rivadeneyra MA, Delgado G, Soriano M, Ramos-Cormenzana A, Delgado R. 2000. Precipitation of carbonates by Nesterenkonia halobia in liquid media. Chemosphere 41:617–624.
  • Rivadeneyra MA, Delgado R, Delgado G, Del Moral A, Ferrer MR, Ramos-Cormenzana A. 1993. Precipitation of carbonates by Bacillus sp isolated from saline soils. Geomicrobiol J 11:175–184.
  • Rivadeneyra MA, Martín-Algarra A, Sánchez-Navas A, Martín-Ramos D. 2006. Carbonate and phosphate precipitation by Chromohalobacter marismortui. Geomicrobiol J 23:1–13.
  • Rivadeneyra MA, Paraga J, Delgado G, Ramos-Coemenzana A, Delgado G. 2004. Biomineralization of carbonates by Halobacillus trueperi in solid and liquid media with different salinities. FEMS Microbiol Ecol 48:39–46.
  • Roberts JA, Bennett PC, Gonzáles LA, Macpherson GL, Milliken KL. 2004. Microbial precipitation of dolomite in methanogenic groundwater. Geology 32:277–280.
  • Roberts JA, Paul AK, David AF, Robert HG, Luis AG, David SM. 2013. Surface chemistry allows for abiotic precipitation of dolomite at low temperature. Proc Natl Acad Sci USA 110:14540–14545.
  • Sánchez-Román M, McKenzie JA, de Luca Rebello Wagener A, Rivadeneyra MA, Vásconcelos C. 2009. Presence of sulfate does not inhibit low-temperature dolomite precipitation. Earth Planet Sci Lett 285:131–139.
  • Sánchez-Román M, Rivadeneyra MA, Vásconcelos C, McKenzie JA. 2007. Carbonate and phosphate precipitation by halophilic bacteria: Influence of Ca and Mg ions. FEMS Microbiol Ecol 6:273–284.
  • Sánchez-Román M, Romanek CS, Fernández-Remolar DC, Sánchez-Navas A, McKenzie JA, Pibernat RA, Vásconcelos C. 2011. Aerobic biomineralization of Mg-rich carbonates: Implications for natural environments. Chem Geol 281:143–150.
  • Silva-Castro GA, Imaneuad AR, Juanıgnacıo V, Daniel M, Jesus G, Maria AR. 2013. Carbonate precipitation of bacterial strains isolated from sediments and seawater: Formation mechanisms. Geomicrobiology J 30:840–850.
  • Soetaert K, Hofmann AF, Middelburg J, Meysman F, Greenwood J. 2007. The effect of biogeochemical processes on pH. Marine Chem 105:30–51.
  • Swainson IP. 2008. The structure of monohydrocalcite and the phase composition of the beachrock depositsof Lake Butler and Lake Fellmongery, South Australia. Am Mineral 93:1014–1018.
  • Thompson JB, Ferris FG. 1990. Cyanobacterial precipitation of gypsum, calcite, and magnesite from natural alkaline lake water. Geology 18:995–998.
  • U.S. EPA 9060 method (U.S. Environmental Protection Agency method 9060A. Available at http://www.oardc.ohio-state.edu/starlab/references.htm.
  • U.S. Geological Survey 2012. Replacement of the simple speciation method for computation of carbonate and bicarbonate concentrations from alkalinity titrations: Office of Water Quality Technical Memorandum 2012.05. Accessed September 16, http://water.usgs.gov/admin/memo/QW/qw12.05.pdf.
  • Van Lith Y, Vásconcelos C, Warthmann R, McKenzie JA. 2003. Sulphate-reducing bacteria induce low-temperature Ca-dolomite and high Mg-calcite formation. Geobiology 1:71–79.
  • Vasconcelos C, McKenzie JA, Berrnasconi S, Grujic D, Tien AJ. 1995. Microbial mediation as a possible mechanism for natural dolomite formation at low temperatures. Nature 377:220–222.
  • Vásconcelos C, McKenzie JA. 1997. Microbial mediation of modern dolomite precipitation and diagenesis under anoxic conditions (Lagoa Vermelha, Rio de Janeiro, Brazil). J Sediment Res 67:378–390.
  • Verrecchia E, Freytet P, Verrecchia KE, Dumont JL. 1995. Spherulites in calcrete laminar crusts: Biogenic CaCO3 precipitation as a major contributor to crust formation. J Sediment Res A65:690–700
  • Warren J. 1990. Sedimentology and mineralogy of dolomitic Coorong Lakes, South Australia. J Sediment Petrol 60:843–858.
  • Warren J. 2000. Dolomite: Occurrence, evolution and economically important associations. Earth-Sci Rev 52:1–81.
  • Warthmann R, van Lith Y, Vásconcelos C, McKenzie JA, Karpoff AM. 2000. Bacterially induced dolomite precipitation in anoxic culture experiments. Geology 28:1091–1094.
  • Wright DT, Oren A. 2005. Non-photosynthetic bacteria and the formation of carbonates and evaporites through time. Geomicrobiol J 22: 27–53.

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