Simultaneous depletion of albumin and immunoglobulin G by using twin affinity magnetic nanotraps

References

• Sahab, Z.J.; Semaan, S.M.; Sang, Q.X.A. (2007) Methodology and applications of disease biomarker ıdentification in human serum. Biomarker Insights, 2: 21–43.
   PubMedGoogle Scholar
• Ye, N.; Li, J. (2013) Serum protein profiling of cervical cancer patients using surface-enhanced laser desorption/ıonization time-of-flight mass spectrometry. Analytical Letters, 46 (2): 250–257.
   Web of Science ®Google Scholar
• Anderson, N.L.; Anderson, N. G. (2002) The human plasma proteome history, character and diagnostic prospects. Molecular & Cellular Proteomics, 1: 845–867.
   PubMed Web of Science ®Google Scholar
• Zeng, Z.; Hincapie, M.; Pitteri, S.J.; Hanash, S.; Schalkwijk, J.; Hogan, J.M.; Wang, H.; Hancock, W.S. (2011) A proteomics platform combining depletion, multi-lectin affinity chromatography (M-LAC), and ısoelectric focusing to study the breast cancer proteome. Analytical Chemistry, 83: 4845–4854.
   PubMed Web of Science ®Google Scholar
• Ramström, M.; Hagman, C.; Mitchell, J.K.; Derrick, P.J.; Håkansson, P.; Bergquist, J. (2005) Depletion of high-abundant proteins in body fluids prior to liquid chromatography Fourier transform ıon cyclotron resonance mass spectrometry. Journal of Proteome Research, 4: 410–416.
   PubMed Web of Science ®Google Scholar
• Kubota, N.N.; Goto, I.; Nakashima, Y.; Eguchi, Y. (2003) Adsorption and desorption of serum proteins using cellulosic affinity membrane modified with N-Acetyl-l-phenylalanine. Separation Science and Technology, 38 (2): 323–336.
   Web of Science ®Google Scholar
• Andaç, M.; Denizli, A. (2014) Affinity-recognition-based polymeric cryogels for protein depletion studies. RSC Advances, 4: 31130–31141.
   Web of Science ®Google Scholar
• Jacobs, J.M.; Adkins, J.N.; Qian, W.J.; Liu, T.; Shen, Y.; Camp, D.G. 2nd; Smith, R.D. (2005) Utilizing human blood plasma for proteomic biomarker discovery. Journal of Proteome Research, 4: 1073–1085.
   PubMed Web of Science ®Google Scholar
• Yocum, A.K.; Yu, K.; Oe, T.; Blair, I.A. (2005) Effect of immunoaffinity depletion of human serum during proteomic ınvestigations. Journal of Proteome Research, 4: 1722–1731.
   PubMed Web of Science ®Google Scholar
• Yavuz, H.; Patir, S.; Say, R.; Arica, Y.; Denizli, A. (2002) Affinity separation of plasma proteins using a newly synthesized methacrylamidoalanine ıncorporated porous pHEMA. Separation Science and Technology, 37 (9): 2077–2095.
   Web of Science ®Google Scholar
• Uzun, L.; Yavuz, H.; Say, R.; Ersöz, A.; Denizli, A. (2004) Poly(ethylene dimethacrylate-glycidyl methacrylate) monolith as a stationary phase in dye-affinity chromatography. Industrial & Engineering Chemistry Research, 43: 6507–6513.
   Web of Science ®Google Scholar
• Denizli, A.; Tuncel, A.; Kozluca, A.; Ecevit, K.; Pişkin, E. (1997) Cibacron blue F3G-a attached poly(viny1 alcohol) particles for specific albumin adsorption. Separation Science and Technology, 32 (5): 1003–1015.
   Web of Science ®Google Scholar
• Zhang, T.; Huizhou, L.; Chen, J. (2000) Affinity-based reversed micellar bovine serum albumin (BSA) extraction with unbound reactive dye. Separation Science and Technology, 35 (1): 143–151.
   Web of Science ®Google Scholar
• Suen, S.-Y.; Tsai, Y.-H.; Chen, R.-L. (2000) Comparison of breakthrough performance using dye-affinity membrane disks and gel bead columns. Separation Science and Technology, 35 (4): 573–591.
   Web of Science ®Google Scholar
• Altıntaş, E. B.; Denizli, A. (2006) Efficient removal of albumin from human serum by monosize dye-affinity beads. Journal of Chromatography B, 832:216–223.
   PubMed Web of Science ®Google Scholar
• Yamamoto, S.; Ishihara, T. (2000) Resolution and retention of proteins near ısoelectric points in ıon-exchange chromatography. molecular recognition in electrostatic ınteraction chromatography. Separation Science and Technology, 35 (11): 1707–1717.
   Web of Science ®Google Scholar
• Sahab, Z. J.; Iczkowski, K. A.; Sang, Q. X. (2007) Anion exchange fractionation of serum proteins versus albumin elimination. Analytical Biochemistry, 368: 24–32.
   PubMed Web of Science ®Google Scholar
• Levin, Y.; Jaros, J. A. J.; Schwarz, E.; Bahn, S. (2010) Multidimensional protein fractionation of blood proteins coupled to data-independent nano LC–MS/MS analysis. Journal of Proteomics, 73: 689–695.
   PubMed Web of Science ®Google Scholar
• Denizli, A; Yavuz, H.; Arıca, Y. (2000) Monosize and non-porous p(HEMA-co-MMA) microparticles designed as dye- and metal-chelate affinity sorbents. Colloids and Surfaces A: Physicochemical and Engineering Aspects, 174 (3): 307–317.
   Web of Science ®Google Scholar
• Zachariou, M.; Hearn, M.T. (2000) Adsorption and selectivity characteristics of several human serum proteins with immobilised hard Lewis metal ion-chelate adsorbents. Journal of Chromatography A, 890: 95–116.
   PubMed Web of Science ®Google Scholar
• Uzun, L.; Denizli, A. (2002) Metal-chelated polyamide hollow fibers for human serum albumin separation. Journal of Applied Polymer Science, 86: 3346–3354.
   Web of Science ®Google Scholar
• Di Girolamo, F.; Righetti, P.G.; D’Amato, A.; Chung, M. C. (2011) Cibacron Blue and proteomics: The mystery of the platoon missing in action. Journal of Proteomics, 74: 2856–2865.
   PubMed Web of Science ®Google Scholar
• Fang, X.; Zhang, W.W. (2008) Affinity separation and enrichment methods in proteomic analysis. Journal of Proteomics, 71: 284–303.
   PubMed Web of Science ®Google Scholar
• Martınez-Arag´on´, M.; Goetheer, E.L.V.; de Haan, A.B. (2009) Host–guest extraction of immunoglobulin G using calix[6]arenas. Separation and Purification Technology, 65: 73–78.
   Web of Science ®Google Scholar
• Mei, N.; Seale, B.; Ng, A.H.C.; Wheeler, A.R.; Oleschuk, R. (2014) Digital microfluidic platform for human plasma protein depletion, Analytical Chemistry, 86: 8466−8472.
   PubMed Web of Science ®Google Scholar
• Vermeer, A.W.P.; Giacomelli, C.E.; Norde, W. (2001) Adsorption of IgG onto hydrophobic teflon. differences between the F(ab) and F(c) domains. Biochimica et Biophysica Acta, 1526: 61–69.
   PubMed Web of Science ®Google Scholar
• Gupalova, T.V.; Lojkina, O.V.; Pàlàgnuk, V.G.; Totolian, A.A.; Tennikov, T.B. (2002) Quantitative investigation of the affinity properties of different recombinant forms of protein G by means of high-performance monolithic chromatography. Journal of Chromatography A, 949: 185–193.
   PubMed Web of Science ®Google Scholar
• Govorukhina, N.I.; Keizer-Gunnink, A.; van der Zee, A.G.; de Jong, S.; de Bruijn, H.W.; Bischoff, R. (2003) Sample preparation of human serum for the analysis of tumor markers. comparison of different approaches for albumin and gamma-globulin depletion. Journal of Chromatography A, 1009: 171–178.
   PubMed Web of Science ®Google Scholar
• Jmeian, Y.; El Rassi, Z. (2007) Tandem affinity monolithic microcolumns with immobilized protein A, protein G’, and antibodies for depletion of high abundance proteins from serum samples: İntegrated microcolumn-based fluidic system for simultaneous depletion and tryptic digestion. Journal of Proteome Research, 6: 947–954.
   PubMed Web of Science ®Google Scholar
• Say, R. Photosensitive aminoacid-monomer linkage and bioconjugation applications in life sciences and biotechnology, PCT/IB2009/055707, Pub. No.: WO/2011/070402, Applied 2009.
   Google Scholar
• Say, R.; Büyüktiryaki, S.; Hür, D.; Yılmaz, F.; Ersöz, A. (2012) A mutial recognition of TNT using antibodies polymeric shell having CdS. Talanta, 90: 103–108.
   PubMed Web of Science ®Google Scholar
• Oztürk, N.; Bereli, N.; Akgöl, S.; Denizli, A. (2008) High capacity binding of antibodies by poly(hydroxyethyl methacrylate) nanoparticles. Colloids and Surfaces B: Biointerfaces, 67: 14–19.
   PubMed Web of Science ®Google Scholar
• Akkaya, B.; Uzun, L.; Candan, F.; Denizli, A. (2007) N-methacryloyl-(L)-histidine methyl ester carrying porous magnetic beads for metal chelate adsorption of cytochrome c. Materials Science and Engineering: C, 27: 180–187.
   Web of Science ®Google Scholar
• Hanggi, D.; Carr, P. (1985) Analytical evaluation of the purity of commercial preparations of Cibacron blue and related dyes. Analytical Biochemistry, 149: 91–104.
   PubMed Web of Science ®Google Scholar
• Baumann, P.; Baumgartner, K.; Hubbuch, J. (2015) Influence of binding pH and protein solubility on the dynamic binding capacity in hydrophobic interaction chromatography. Journal of Chromatography A, 1396: 77–85.
   PubMed Web of Science ®Google Scholar
• Tamahkar, E.; Babaç, C.; Kutsal, T.; Pişkin, E.; Denizli, A. (2010) Bacterial cellulose nanofibers for albumin depletion from human serum. Process Biochemistry, 45: 1713–1719.
   Web of Science ®Google Scholar
• Türkmen, D.; Denizli, A.; Öztürk, N.; Akgöl, S. and Elkak, A. (2008) Phenylalanine containing hydrophobic nanospheres for antibody purification. Biotechnology Progress, 24, 1297–1303.
   PubMed Web of Science ®Google Scholar
• Büyüktiryaki, S.; Say, R.; Denizli, A.; Ersöz, A. (2007) Mimicking receptor for methylmercury preconcentration based on ion-imprinting. Talanta, 71: 699–705.
   PubMed Web of Science ®Google Scholar
• Demiryas, N.; Tüzmen, N.; Galaev, I.; Pişkin, E.; Denizli, A. (2007) Poly(acrylamide-allyl glycidyl ether) cryogel as a novel stationary phase in dye-affinity chromatography. Journal of Applied Polymer Science, 105: 1808–1816.
   Web of Science ®Google Scholar
• Qu, F.; Guan, Y.; Ma, Z.; Zhang, Q. (2009) Synthesis of Cibacron Blue F3GA-coupled magnetic PMMA nanospheres and their use for protein affinity separation. Polymer International, 58: 888–892.
   Web of Science ®Google Scholar