1,628
Views
2
CrossRef citations to date
0
Altmetric
Editorial

Showcasing the application of genetics for the conservation management of austral birds

&

References

  • Allendorf, F. W. (2017). Genetics and the conservation of natural populations: Allozymes to genomes. Molecular Ecology 26(2), 420–430. doi:10.1111/mec.13948
  • Athrey, G., Barr, K. R., Lance, R. F., and Leberg, P. L. (2012). Birds in space and time: Genetic changes accompanying anthropogenic habitat fragmentation in the endangered black-capped vireo (Vireo atricapilla). Evolutionary Applications 5(6), 540–552. doi:10.1111/j.1752-4571.2011.00233.x
  • Beckmann, C., Major, R. E., Frankham, G. J., Thomas, S., Biro, P. A., Ujvari, B., and Neaves, L. (2021). Genetic structure and gene flow in the Flame Robin (Petroica phoenicea). Emu - Austral Ornithology 121(1–2), 158–163. doi:10.1080/01584197.2021.1925921
  • Birdlife International (2016). ‘Species factsheet: Apteryx owenii.’ Available at http://www.birdlife.org [Verified 12 January 2016].
  • Birdlife International (2018a). ‘State of the World’s Birds: Taking the Pulse of the Planet.’ (Cambridge: UK.)
  • Birdlife International (2018b). Thalassarche bulleri. The IUCN Red List of Threatened Species 2018, e.T22728328A132656798.
  • Birdlife International (2021). ‘Species factsheet: Thalassarche bulleri.’ Available at http://datazone.birdlife.org/species/factsheet/bullers-albatross-thalassarche-bulleri/text [Verified 20 April 2021].
  • Bolton, P. E., and Griffith, S. C. (2021). Evolution in aviculture: loss of genetic diversity and head-colour morph frequency divergence in the domesticated Gouldian Finch (Erythrura gouldiae). Emu - Austral Ornithology 121(1–2), 55–66. doi:10.1080/01584197.2020.1859336
  • Brouwer, L., and Griffith, S. C. (2019). Extra-pair paternity in birds. Molecular Ecology 28(22), 4864–4882. doi:10.1111/mec.15259
  • Brown, J. I., Lavretsky, P., Joseph, L., Roshier, D., Guay P.-J., and Peters, J. L. (2021). A multi-locus approach to discern conservation units and adaptive potential of Pacific black ducks across Australia and surrounding islands. Emu - Austral Ornithology 121(1–2), 123–134. doi:10.1080/01584197.2021.1911601
  • Burbidge, A. H., Dolman, G., Ottewell, K., Johnstone, R., and Burbidge, M. (2021). Genetic and morphological relationships of fieldwrens (Calamanthus): implications for conservation status and management. Emu - Austral Ornithology 121(1–2), 74–88. doi:10.1080/01584197.2021.1922293
  • Butler, D., and Merton, D. (1992). ‘The Black Robin: Saving the World’s Most Endangered Bird.’ (Oxford University Press: Oxford, UK.)
  • Cadena, C. D., and Zapata, F. (2021). The genomic revolution and species delimitation in birds (and other organisms): Why phenotypes should not be overlooked. Ornithology 138(2). doi:10.1093/ornithology/ukaa069
  • Caro, T. M., and Laurenson, M. K. (1994). Ecological and genetic factors in conservation: A cautionary tale. Science 263(5146), 485–486. doi:10.1126/science.8290956
  • Caughley, G. (1994). Directions in conservation biology. Journal of Animal Ecology 63(2), 215–244. doi:10.2307/5542
  • Cook, C. N., and Sgrò, C. M. (2017). Aligning science and policy to achieve evolutionarily enlightened conservation. Conservation Biology 31(3), 501–512. doi:10.1111/cobi.12863
  • Cowen, S. J., Comer, S., Wetherall, J. D., and Groth, D. M. (2021). Translocations and their effect on population genetics in an endangered and cryptic songbird, the Noisy Scrub-bird Atrichornis clamosus. Emu - Austral Ornithology 121(1–2), 33–44. doi:10.1080/01584197.2021.1888125
  • Cowles, S. A., Weeks, B. C., Perrin, L., Chen, N., and Uy, J. A. C. (2021). Comparison of adult census size and effective population size support the need for continued protection of two Solomon Island endemics. Emu - Austral Ornithology 121(1–2), 45–54. doi:10.1080/01584197.2021.1915163
  • Dussex, N., Taylor, H. R., Irestedt, M., and Robertson, B. C. (2018). When genetic and phenotypic data do not agree: The conservation implications of ignoring inconvenient taxonomic evidence. New Zealand Journal of Ecology 42(2), 284–290. doi:10.20417/nzjecol.42.13
  • Dwyer, J. A., Laws, R. J., and Grueber, C. E. (2021). Evolutionary genetics of translocated island populations of birds: data and opportunities. Emu - Austral Ornithology 121(1–2), 101–111. doi:10.1080/01584197.2021.1879657
  • Feng, S., Stiller, J., Deng, Y., Armstrong, J., Fang, Q., Reeve, A. H., Xie, D., et al. (2020). Dense sampling of bird diversity increases power of comparative genomics. Nature 587(7833), 252–257. doi:10.1038/s41586-020-2873-9
  • Fischer, J. H., Debski, I., Miskelly, C. M., Bost, C. A., Fromant, A., Tennyson, A. J. D., Tessler, J., et al. (2018). Analyses of phenotypic differentiations among South Georgian Diving Petrel (Pelecanoides georgicus) populations reveal an undescribed and highly endangered species from New Zealand. PLOS ONE 13(6), e0197766. doi:10.1371/journal.pone.0197766
  • Fischer, J. H., Taylor, G. A., Cole, R., Debski, I., Armstrong, D. P., and Wittmer, H. U. (2020). Population growth estimates of a threatened seabird indicate necessity for additional management following invasive predator eradications. Animal Conservation 23(1), 94–103. doi:10.1111/acv.12516
  • Fitzpatrick, B. M., Ryan, M. E., Johnson, J. R., Corush, J., and Carter, E. T. (2015). Hybridization and the species problem in conservation. Current Zoology 61(1), 206–216. doi:10.1093/czoolo/61.1.206
  • Forsdick, N. J. Cubrinovska, I., Massaro, M., and Hale, M. L. (2021). Microsatellite genotyping detects extra-pair paternity in the Chatham Island Black Robin, a highly inbred, socially monogamous passerine. Emu - Austral Ornithology 121(1–2), 67–73. doi:10.1080/01584197.2020.1812406
  • Frankel, O. H. (1974). Genetic conservation: Our evolutionary responsibility. Genetics 78(1), 53–65. doi:10.1093/genetics/78.1.53
  • Frankel, O. H., and Soulé, M. (1981). ‘Conservation and Evolution.’ (Cambridge University Press: Cambridge, UK.)
  • Frankham, R. (2005). Genetics and extinction. Biological Conservation 126(2), 131–140. doi:10.1016/j.biocon.2005.05.002
  • Frankham, R. (2010). Inbreeding in the wild really does matter. Heredity 104(2), 124. doi:10.1038/hdy.2009.155
  • Germano, J., Barlow, S., Castro, I., Colbourne, R., Cox, M., Gillies, C., Hackwell, K., et al. (2018). Kiwi (Apteryx spp.) recovery plan 2018–2028. Department of Conservation Threatened Species Recovery Plan 64. New Zealand Department of Conservation.
  • Grosser, S., Abdelkrim, J., Wing, J., Robertson, B. C., and Gemmell, N. J. (2017). Strong isolation by distance argues for separate population management of endangered blue duck (Hymenolaimus malacorhynchos). Conservation Genetics 18(2), 327–341. doi:10.1007/s10592-016-0908-4
  • Grosser, S., Robertson, F., Shepherd, L. D., Tennyson, A. J. D., Miskelly, C. M., Taylor, G. A., and Robertson, B. C. (2021). Phylogenetic affinities of the Whenua Hou Diving Petrel: implications for conservation. Emu - Austral Ornithology 121(1–2), 101–111. doi:10.1080/01584197.2021.1908148
  • Grueber, C. E., Laws, R. J., Nakagawa, S., and Jamieson, I. G. (2010). Inbreeding depression accumulation across life-history stages of the endangered takahe. Conservation Biology 24(6), 1617–1625. doi:10.1111/j.1523-1739.2010.01549.x
  • Hoban, S. M., Arntzen, J. W., Bertorelle, G., Bryja, J., Fernandes, M., Frith, K., Gaggiotti, O., et al. (2013). Conservation Genetic Resources for Effective Species Survival (ConGRESS): Bridging the divide between conservation research and practice. Journal for Nature Conservation 21(6), 433–437. doi:10.1016/j.jnc.2013.07.005
  • Hogg, C. J., Grueber, C. E., Pemberton, D., Fox, S., Lee, A. V., Ivy, J. A., and Belov, K. (2017). “Devil Tools & Tech”: A synergy of conservation research and management practice. Conservation Letters 10(1), 133–138. doi:10.1111/conl.12221
  • Holderegger, R., Balkenhol, N., Bolliger, J., Engler, J. O., Gugerli, F., Hochkirch, A., Nowak, C., et al. (2019). Conservation genetics: Linking science with practice. Molecular Ecology 28(17), 3848–3856. doi:10.1111/mec.15202
  • Jamieson, I. G., Wallis, G. P., and Briskie, J. V. (2006). Inbreeding and endangered species management: Is New Zealand out of step with the rest of the world? Conservation Biology 20(1), 38–47. doi:10.1111/j.1523-1739.2005.00282.x
  • Joseph, L., Campbell, C. D., Drew, A., Nyári, Á., and Andersen, M. J. (2021). How far east can a Western Whistler go? Genomic data reveal large eastward range extension, taxonomic and nomenclatural change, and reassessment of conservation needs. Emu - Austral Ornithology 121(1–2), 89–100. doi:10.1080/01584197.2020.1854047
  • Joseph, L., Merwin, J., and Smith, B. T. (2020). Improved systematics of lorikeets reflects their evolutionary history and frames conservation priorities. Emu - Austral Ornithology 120(3), 201–215. doi:10.1080/01584197.2020.1779596
  • Kardos, M., Luikart, G., and Allendorf, F. W. (2015). Measuring individual inbreeding in the age of genomics: Marker-based measures are better than pedigrees. Heredity 115(1), 63–72. doi:10.1038/hdy.2015.17
  • Lande, R. (1988). Genetics and demography in biological conservation. Science 241(4872), 1455–1460. doi:10.1126/science.3420403
  • Liu, J., Mooney, H., Hull, V., Davis, S. J., Gaskell, J., Hertel, T., Lubchenco, J., et al. (2015). Systems integration for global sustainability. Science 347(6225), 1258832. doi:10.1126/science.1258832
  • Lohr, M. T. (2018). Anticoagulant rodenticide exposure in an Australian predatory bird increases with proximity to developed habitat. The Science of the Total Environment 643, 134–144. doi:10.1016/j.scitotenv.2018.06.207
  • Lohr, M. T., Krauss, S. L., Spencer, P. B. S., Anthony, J. M., Burbidge, A. H., and Davis, R. A. (2020). Widespread genetic connectivity in Australia’s most common owl, despite extensive habitat fragmentation. Emu - Austral Ornithology 120(3), 249–259. doi:10.1080/01584197.2020.1794908
  • Mackintosh, M. A., and Briskie, J. (2005). High levels of hatching failure in an insular population of the South Island robin: A consequence of food limitation? Biological Conservation 122(3), 409–416. doi:10.1016/j.biocon.2004.09.002
  • Manel, S., Schwartz, M. K., Luikart, G., and Taberlet, P. (2003). Landscape genetics: Combining landscape ecology and population genetics. Trends in Ecology & Evolution 18(4), 189–197. doi:10.1016/S0169-5347(03)00008-9
  • Massaro, M., Chick, A., Kennedy, E. S., and Whitsed, R. (2018). Post-reintroduction distribution and habitat preferences of a spatially limited island bird species. Animal Conservation 21(1), 54–64. doi:10.1111/acv.12364
  • Moritz, C. (1994). Defining ‘Evolutionarily Significant Units’ for conservation. Trends in Ecology & Evolution 9(10), 373–375. doi:10.1016/0169-5347(94)90057-4
  • Munro, K. J., and Burg, T. M. (2017). A review of historical and contemporary processes affecting population genetic structure of Southern Ocean seabirds. Emu - Austral Ornithology 117(1), 4–18. doi:10.1080/01584197.2016.1271988
  • Pierson, J. C., Coates, D. J., Oostermeijer, J. G. B., Beissinger, S. R., Bragg, J. G., Sunnucks, P., Schumaker, N. H., et al. (2016). Genetic factors in threatened species recovery plans on three continents. Frontiers in Ecology and the Environment 14(8), 433–440. doi:10.1002/fee.1323
  • Pryke, S. R. (2007). Fiery red heads: Female dominance among head color morphs in the Gouldian finch. Behavioral Ecology 18(3), 621–627. doi:10.1093/beheco/arm020
  • Pryke, S. R., Astheimer, L. B., Buttemer, W. A., and Griffith, S. C. (2007). Frequency-dependent physiological trade-offs between competing colour morphs. Biology Letters 3(5), 494–497. doi:10.1098/rsbl.2007.0213
  • Radford, J. Q., Amos, N., Harrisson, K., Sunnucks, P., and Pavlova, A. (2021). Functional connectivity and population persistence in woodland birds: insights for management from a multi-species conservation genetics study. Emu - Austral Ornithology 121(1–2), 145–157. doi:10.1080/01584197.2021.1903331
  • Ramstad, K. M., Colbourne, R. M., Robertson, H. A., Allendorf, F. W., and Daugherty, C. H. (2013). Genetic consequences of a century of protection: Serial founder events and survival of the little spotted kiwi (Apteryx owenii). Proceedings of the Royal Society B: Biological Sciences 280(1762), 20130576. doi:10.1098/rspb.2013.0576
  • Ramstad, K. M., Gibb, G. C., Robertson, H. A., Colbourne, R. M., Doran, E. E., and Shepherd, L. D. (2021). Recent extinctions among Little Spotted Kiwi (Apteryx owenii) and the origin of extant populations. Emu - Austral Ornithology 121(1–2), 23–32. doi:10.1080/01584197.2020.1840926
  • Ramstad, K. M., Pfunder, M., Robertson, H. A., Colbourne, R. M., Allendorf, F. W., and Daugherty, C. H. (2010). Fourteen microsatellite loci cross-amplify in all five kiwi species (Apteryx spp.) and reveal extremely low genetic variation in little spotted kiwi (A. owenii). Conservation Genetics Resources 2(S1), 333–336. doi:10.1007/s12686-010-9233-2
  • Robertson, H. A., Baird, K., Dowding, J. E., Elliott, G. P., Hitchmough, R. A., Miskelly, C. M., McArthur, N., et al. (2017). Conservation status of New Zealand birds, 2016. Department of Conservation New Zealand Threat Classification Series 19. Available at https://www.doc.govt.nz/globalassets/documents/science-and-technical/nztcs19entire.pdf
  • Ryder, O. A. (1986). Species conservation and systematics: The dilemma of subspecies. Trends in Ecology & Evolution 1(1), 9–10. doi:10.1016/0169-5347(86)90059-5
  • Schonewald-Cox, C. M., Chambers, S. M., MacBryde, B., and Thomas, W. L. (1983). ‘Genetics and Conservation.’ (Benjamin/Cu mings: Menlo Park, CA.)
  • Seddon, P. J. (2010). From reintroduction to assisted colonization: Moving along the conservation translocation spectrum. Restoration Ecology 18(6), 796–802. doi:10.1111/j.1526-100X.2010.00724.x
  • Soulé, M., and Wilcox, B. M. (1980). ‘Conservation Biology: An Evolutionary-Ecological Perspective.’ (Sinauer: Sunderland, MA.)
  • Stevens, K., Harrisson, K. A., Hogan, F. E., Cooke, R., and Clarke, R. H. (2018). Reduced gene flow in a vulnerable species reflects two centuries of habitat loss and fragmentation. Ecosphere 9(2), e02114. doi:10.1002/ecs2.2114
  • Sunnucks, P. (2011). Towards modelling persistence of woodland birds: The role of genetics. Emu - Austral Ornithology 111(1), 19–39. doi:10.1071/mu10008
  • Taylor, H. R. (2015). The use and abuse of genetic marker-based estimates of relatedness and inbreeding. Ecology and Evolution 5(15), 3140–3150. doi:10.1002/ece3.1541
  • Taylor, H. R., Colbourne, R. M., Robertson, H. A., Nelson, N. J., Allendorf, F. W., and Ramstad, K. M. (2017a). Cryptic inbreeding depression in a growing population of a long-lived species. Molecular Ecology 26(3), 799–813. doi:10.1111/mec.13977
  • Taylor, H. R., Dussex, N., and van Heezik, Y. (2017b). Bridging the conservation genetics gap by identifying barriers to implementation for conservation practitioners. Global Ecology and Conservation 10, 231–242. doi:10.1016/j.gecco.2017.04.001
  • Taylor, H. R., Robertson, H., Carter, A. L., and Ramstead, K. M. (2021). The conservation management implications of isolation by distance and high genetic diversity in Great Spotted Kiwi (Apteryx haastii). Emu - Austral Ornithology 121(1–2), 10–22. doi:10.1080/01584197.2021.1888126
  • Tracy, L. N., Wallis, G. P., Efford, M. G., and Jamieson, I. G. (2011). Preserving genetic diversity in threatened species reintroductions: How many individuals should be released? Animal Conservation 14(4), 439–446. doi:10.1111/j.1469-1795.2011.00448.x
  • Trask, A. E., Ferrie, G. M., Wang, J., Newland, S., Canessa, S., Moehrenschlager, A., Laut, M., et al. (2021). Multiple life-stage inbreeding depression impacts demography and extinction risk in an extinct-in-the-wild species. Scientific Reports 11(1), 682. doi:10.1038/s41598-020-79979-4
  • VanderWerf, E. A. (2012). ‘Hawaiian Bird Conservation Action Plan.’ (Pacific Rim Conservation and U.S. Fish and Wildlife Service: Honolulu, HI.)
  • Wang, X., He, Z., Shi, S., and Wu, C.-I. (2020). Genes and speciation: Is it time to abandon the biological species concept? National Science Review 7(8), 1387–1397. doi:10.1093/nsr/nwz220
  • WAZA (2010). ‘Resource Manual for International Studbook Keepers.’ (World Association of Zoos and Aquaria: Gland, Switzerland.)
  • Weeks, A. R., Thavornkanlapachai, R., Weiser, E. L., and Heinze, D. (2015). Conserving and enhancing genetic diversity in translocation programmes. In ‘Advances in Reintroduction Biology of Australian and New Zealand Fauna.’ (Eds D. P. Armstrong, M. W. Hayward, D. Moro, and P. J. Seddon.) pp. 127–139. (CSIRO Publishing: Collingwood, VC.)
  • Weston, K. A., and Robertson, B. C. (2015). Population structure within an alpine archipelago: Strong signature of past climate change in the New Zealand rock wren (Xenicus gilviventris). Molecular Ecology 24(18), 4778–4794. doi:10.1111/mec.13349
  • Wold, J. R., Robertson, C. J. R., Chambers, G. K., Van Stijn, T., and Ritchie, P. A. (2021). Genetic connectivity in allopatric seabirds: lack of inferred gene flow between Northern and Southern Buller’s albatross populations (Thalassarche bulleri ssp.). Emu - Austral Ornithology 121(1–2), 112–122. doi:10.1080/01584197.2021.1894406
  • Wright, S. (1943). Isolation by distance. Genetics 28(2), 114 LP – 138. Available at http://www.genetics.org/content/28/2/114.abstract
  • Wright, S. (1946). Isolation by distance under diverse systems of mating. Genetics 31(1), 39–59. Available at https://pubmed.ncbi.nlm.nih.gov/21009706
  • Zhang, G., Jarvis, E. D., and Gilbert, M. T. P. (2014). A flock of genomes. Science 346(6215), 1308–1309. doi:10.1126/science.346.6215.1308

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.