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Articles

A new scincid lizard from the Miocene of northern Australia, and the evolutionary history of social skinks (Scincidae: Egerniinae)

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Article: e1577873 | Received 14 Feb 2018, Accepted 26 Oct 2018, Published online: 30 Apr 2019

LITERATURE CITED

  • Alekseyenko, A. V., C. J. Lee, M. A. Suchard, and L. Kubatko. 2008. Wagner and Dollo: a stochastic duet by composing two parsimonious solos. Systematic Biology 57:772–784. doi: 10.1080/10635150802434394
  • Arena, D. A., K. H. Black, M. Archer, S. J. Hand, H. Godthelp, and P. Creaser. 2014. Reconstructing a Miocene pitfall trap: recognition and interpretation of fossiliferous Cenozoic paleokarst. Sedimentary Geology 304:28–43. doi: 10.1016/j.sedgeo.2014.01.005
  • Bell, C. J., and J. I. Mead. 2014. Not enough skeletons in the closet: collections-based anatomical research in an age of conservation conscience. The Anatomical Record 297:344–348. doi: 10.1002/ar.22852
  • Black, K. H., A. B. Camens, M. Archer, and S. J. Hand. 2012. Herds overhead: Nimbadon lavarackorum (Diprotodontidae) heavyweight marsupial herbivores in the Miocene rainforests of Australia. PLoS ONE 7:e48213. doi: 10.1371/journal.pone.0048213.
  • Black, K. H., K. J. Travouillon, T. J. Myers, M. Archer, S. J. Hand, and L. A. B. Wilson. 2015. Functional and geometric morphometric analysis of a middle Miocene bandicoot (Marsupialia, Peramelemorphia) skeleton from the Riversleigh World Heritage Area, Australia. Journal of Vertebrate Paleontology 35 (Programs and Abstracts):91.
  • Brown, C. M., C. S. VanBuren, D. W. Larson, K. S. Brink, N. E. Campione, M. J. Vavrek, and D. C. Evans. 2015. Tooth counts through growth in diapsid reptiles: implications for interpreting individual and size-related variation in the fossil record. Journal of Anatomy 226:322–333. doi: 10.1111/joa.12280
  • Bull, C. M. 2000. Monogamy in lizards. Behavioural Processes 51:7–20. doi: 10.1016/S0376-6357(00)00115-7
  • Chapple, D. G. 2003. Ecology, life-history, and behaviour in the Australian scincid genus Egernia, with comments on the evolution of complex sociality in lizards. Herpetological Monographs 17:145–180. doi: 10.1655/0733-1347(2003)017[0145:ELABIT]2.0.CO;2
  • Chapple, D. G., and J. S. Keogh. 2004. Parallel adaptive radiations in arid and temperate Australia: molecular phylogeography and systematics of the Egernia whitii (Lacertilia: Scincidae) species group. Biological Journal of the Linnean Society 83:157–173. doi: 10.1111/j.1095-8312.2004.00378.x
  • Cogger, H. 2014. Reptiles and Amphibians of Australia. CSIRO Publishing, Clayton, Victoria, Australia, 1033 pp.
  • Cogger, H. G., E. E. Cameron, and H. M. Cogger. 1983. Zoological Catalogue of Australia. Volume I: Amphibia and Reptilia. Australian Government Publishing Service, Canberra, Australia, 313 pp.
  • Diogo, R., and V. Abdala. 2010. The head muscles of dipnoans—a review on the homologies and evolution of these muscles within vertebrates; pp. 169–218 in J. M. Jorgensen and J. Joss (eds.), Biology of Lungfishes. Science Publishers and Taylor and Francis, Oxford, U.K.
  • Drummond, A. J., and M. A. Suchard. 2010. Bayesian random local clocks, or one rate to rule them all. BMC Biology 8:114.
  • Drummond, A. J., M. A. Suchard, D. Xie, and A. Rambaut. 2012. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Molecular Biology and Evolution 29:1969–1973. doi: 10.1093/molbev/mss075
  • Estes, R., and E. E. Williams. 1984. Ontogenetic variation in the molariform teeth of lizards. Journal of Vertebrate Paleontology 4:96–107. doi: 10.1080/02724634.1984.10011989
  • Evans, S. E. 2008. The skull of lizards and tuatara; pp. 1–347 in C. Gans, A. S. Gaunt, and K. Adler (eds.), Biology of the Reptilia, Volume 20: The Skull of Lepidosauria. Society for the Study of Amphibians and Reptiles, Ithaca, New York.
  • Fitzinger, L. 1843. Systema reptilium. Fasciculus primus, Amblyglossae. Braumüller et Seidel, Vindobonae, Vienna, 22 pp.
  • Fordham, D. A., M. J. Watts, S. Delean, B. W. Brook, L. Heard, and C. M. Bull. 2012. Managed relocation as an adaptation strategy for mitigating climate change threats to the persistence of an endangered lizard. Global Change Biology 18:2743–2755. doi: 10.1111/j.1365-2486.2012.02742.x
  • Gardner, M. G., C. M. Bull, and S. J. B. Cooper. 2002. High levels of genetic monogamy in the group-living Australian lizard Egernia stokesii. Molecular Ecology 11:1787–1794. doi: 10.1046/j.1365-294X.2002.01552.x
  • Gardner, M. G., A. F. Hugall, S. C. Donnellan, M. N. Hutchinson, and R. Foster. 2008. Molecular systematics of social skinks: phylogeny and taxonomy of the Egernia group (Reptilia: Scincidae). Zoological Journal of the Linnaean Society 154:781–794. doi: 10.1111/j.1096-3642.2008.00422.x
  • Gauthier, J. A., M. Kearney, J. A. Maisano, O. Rieppel, and A. D. B. Behlke. 2012. Assembling the squamate tree of life: perspectives from the phenotype and the fossil record. Bulletin of the Peabody Museum of Natural History 53:3–308. doi: 10.3374/014.053.0101
  • Gavryushkina, A., T. A. Heath, D. T. Ksepka, T. Stadler, D. Welch, and A. J. Drummond. 2017. Bayesian total-evidence dating reveals the recent crown radiation of penguins. Systematic Biology 66:57–73.
  • Goloboff, P., J. Farris, and K. Nixon. 2008. TNT, a free program for phylogenetic analysis. Cladistics 24:774–786. doi: 10.1111/j.1096-0031.2008.00217.x
  • Gray, J. E. 1825. A synopsis of the genera of reptiles and Amphibia, with a description of some new species. Annals of Philosophy 10:193–217.
  • Gray, J. E. 1838. Catalogue of the slender-tongued saurians, with descriptions of many new genera and species (continued). Annals and Magazine of Natural History 2:287–293 doi: 10.1080/00222933809496676
  • Greer, A. E. 1979. A phylogenetic subdivision of Australian skinks. Records of the Australian Museum 32:339–371. doi: 10.3853/j.0067-1975.32.1979.459
  • Greer, A. E. 1989. The Biology and Evolution of Australian Lizards. Surrey Beatty & Sons, Chipping Norton, New South Wales, Australia, 264 pp.
  • Hagen, I. J., S. C. Donnellan, and C. M. Bull. 2012. Phylogeography of the prehensile-tailed skink Corucia zebrata on the Solomon Archipelago. Ecology and Evolution 2:1220–1234. doi: 10.1002/ece3.84
  • Hedges, S. B. 2014. The high-level classification of skinks (Reptilia, Squamata, Scincomorpha). Zootaxa 3765:317–338. doi: 10.11646/zootaxa.3765.4.2
  • Hollenshead, M. G., J. I. Mead, and S. L. Swift. 2011. Late Pleistocene Egernia group skinks (Squamata: Scincidae) from Devils Lair, Western Australia. Alcheringa 35:31–51.
  • Honda, M., H. Ota, M. Kobayashi, and T. Hikida. 1999. Phylogenetic relationships of Australian skinks of the Mabuya group (Reptilia: Scincidae) inferred from mitochondrial DNA sequences. Genes and Genetics Systems 74:135–139.
  • Honda, M., H. Ota, M. Kobayashi, J. Nabhitabhata, H. Yong, and T. Hikida. 2000. Phylogenetic relationships, character evolution, and biogeography of the subfamily Lygosominae (Reptilia: Scincidae) inferred from mitochondrial DNA sequences. Molecular Phylogenetics and Evolution 15:452–461. doi: 10.1006/mpev.1999.0767
  • Hutchinson, M. N. 1992. Origins of the Australian scincid lizards: a preliminary report on the skinks of Riversleigh. The Beagle, Records of the Northern Territory Museum of Arts and Sciences 9:61–70.
  • Hutchinson, M. N., and B. S. Mackness. 2002. Fossil lizards from the Pliocene Chinchilla Local Fauna, Queensland. Records of the South Australian Museum 35:169–184.
  • Kear, B. P., M. Archer, and T. F. Flannery. 2001. Postcranial morphology of Ganguroo bilamena Cooke, 1997 (Marsupialia: Macropodidae) from the Middle Miocene of Riversleigh, northwestern Queensland. Memoirs of the Association of Australasian Palaeontologists 25:123–138.
  • Kosma, R. 2003. The dentitions of recent and fossil scincomorphan lizards (Lacertilia, Squamata) - systematics, functional morphology, paleocology. Ph.D. dissertation, University Hannover, Hanover, Germany, 229 pp.
  • Lambert, S. M., T. W. Reeder, and J. J. Wiens. 2015. When do species-tree and concatenated estimates disagree? An empirical analysis with higher-level scincid lizard phylogeny. Molecular Phylogenetics and Evolution 82:146–155. doi: 10.1016/j.ympev.2014.10.004
  • Lanfear, R., P. B. Frandsen, A. M. Wright, T. Senfeld, and B Calcott. 2016. PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution 34:772–773.
  • Lee, M. S. Y., and A. Palci. 2015. Morphological phylogenetics in the genomic age. Current Biology 25:922–929. doi: 10.1016/j.cub.2015.07.009
  • Lewis, P. O. 2001. A likelihood approach to estimating phylogeny from discrete morphological character data. Systematic Biology 50:913–925. doi: 10.1080/106351501753462876
  • Maddison, W. P., and D. R. Maddison. 2017. Mesquite: a modular system for evolutionary analysis. Version 3.2. Available at mesquiteproject.org. Accessed 28/03/2016.
  • Mitchell, F. J. 1950. The scincid genera Egernia and Tiliqua (Lacertilia). Records of the South Australian Museum 9:275–308.
  • Oliver, P. M., R. M. Brown, F. Kraus, E. Rittmeyer, S. L. Travers, and C. D. Siler. 2018. Lizards of the lost arcs: mid-Cenozoic diversification, persistence and ecological marginalization in the West Pacific. Proceedings of the Royal Society B: Biological Sciences 285: 20171760.
  • Oppel, M. 1811. Die Ordnungen, Familien und Gattungen der Reptilien als Prodrom einer naturgeschichte derselben. Joseph Lindauer, Munich, xii + 87 pp.
  • O’Reilly, J. E., M. N. Puttick, L. Parry, A. R. Tanner, J. E. Tarver, J. Fleming, D. Pisani, and P. C. J. Donoghue. 2016. Bayesian methods outperform parsimony but at the expense of precision in the estimation of phylogeny from discrete morphological data. Biology Letters 12:20160081.
  • Peters, W. 1872. Untitled [Mr. W. Peters made a statement about new collections of Batrachians (of Dr. O Wucherer from Bahia), as well as some new or lesser known saurians]. Monatsberichte der Königlichen Preussische Akademie des Wissenschaften zu Berlin 1872:776.
  • Pyron, R. A., F. T. Burbrink, and J. J. Wiens. 2013. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes. BMC Evolutionary Biology 13:93.
  • Rabosky, D. L. 2010. Extinction rates should not be estimated from molecular phylogenies. Evolution 6:1816–1824. doi: 10.1111/j.1558-5646.2009.00926.x
  • Reeder, T. W. 2003. A phylogeny of the Australian Sphenomorphus group (Scincidae: Squamata) and the phylogenetic placement of the crocodile skinks (Tribolonotus): Bayesian approaches to assessing congruence and obtaining confidence in maximum likelihood inferred relationships. Molecular Phylogenetics and Evolution 27:384–397. doi: 10.1016/S1055-7903(02)00448-7
  • Ronquist, F., M. Teslenko, P. van der Mark, D. L. Ayers, A. Darling, S. Höhna, B. Larget, L. Liu, M. A. Suchard, and J. P. Huelsenbeck. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61:539–542. doi: 10.1093/sysbio/sys029
  • Schofield, J. A., A. L. Fenner, K. Pelgrim, and C. M. Bull. 2012. Male-biased movement in pygmy bluetongue lizards: implications for conservation. Wildlife Research 39:677–684. doi: 10.1071/WR12098
  • Schwenk, K. 2000. Feeding in Lepidosaurs; pp. 175–291 in K. Schwenk (ed.), Feeding, Form, Function and Evolution in Tetrapod Vertebrates. Academic Press, San Diego, California.
  • Shea, G. M. 1990. The genera Tiliqua and Cyclodomorphus (Lacertilia: Scincidae): generic diagnoses and systematic relationships. Memoirs of the Queensland Museum 29:495–520.
  • Shea, G. M., and M. N. Hutchinson. 1992. A new species of lizard (Tiliqua) from the Miocene of Riversleigh, Queensland. Memoirs of the Queensland Museum 32:303–310.
  • Skinner, A., A. F. Hugall, and M. N. Hutchinson. 2011. Lygosomine phylogeny and the origins of Australian scincid lizards. Journal of Biogeography 38:1044–1058. doi: 10.1111/j.1365-2699.2010.02471.x
  • Swofford, D. L. 2003. PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
  • Title, P. O, and D. L. Rabosky. 2016. Do macrophylogenies yield stable macroevolutionary inferences? An example from squamate reptiles. Systematic Biology 66:843–856
  • Tonini, J. F. R., K. H. Beard, R. B. Ferreira, W. Jetz, and R. A. Pyron. 2016. Fully-sampled phylogenies of squamates reveal evolutionary patterns in threat status. Biological Conservation 204:23–31. doi: 10.1016/j.biocon.2016.03.039
  • Travouillon. K. J., S. Legendre, M. Archer, and S. J. Hand. 2009. Palaeoecological analyses of Riversleigh's Oligo-Miocene sites: implications for Oligo-Miocene climate change in Australia. Palaeogeography, Palaeoclimatology, Palaeoecology 276:24–37. doi: 10.1016/j.palaeo.2009.02.025
  • Uetz, P., P. Freed, and J. Hošek (eds.). 2016. The Reptile Database. Available at www.reptile-database.org. Accessed 3/09/2016.
  • Wells, R. W. and C. R. Wellington and Wellington. 1984. A synopsis of the Class Reptilia in Australia. Australian Journal of Herpetology 1:73–129.
  • Welch, K. R. G. 1982. Herpetology of the Old World. II. Preliminary comments on the classification of skinks (Family Scincidae) with specific reference to those genera found in Africa, Europe, and southwest Asia. Herptile 7:25–27.
  • Woinarski, J. C. Z., A. A. Burbridge, and P. L. Harrison (eds.). 2014. The Action Plan for Australian Mammals 2012. CSIRO Publishing, Clayton, Victoria, Australia, 1038 pp.
  • Woodhead, J., S. J. Hand, M. Archer, I. Graham, K. Sniderman, D. A. Arena, K. H. Black, H. Godthelp, P. Creaser, and E. Price. 2016. Developing a radiometrically-dated chronologic sequence for Neogene biotic change in Australia, from the Riversleigh World Heritage Area of Queensland. Gondwana Research 29:153–167. doi: 10.1016/j.gr.2014.10.004
  • Wright, A. M., and D. M. Hillis. 2014. Bayesian analysis using a simple likelihood model outperforms parsimony for estimation of phylogeny from discrete morphological data. PLoS ONE 9:e109210.
  • Wright, A. M., K. M. Lyons, M. C. Brandley, and D. M. Hillis. 2015. Which came first: the lizard or the egg? Robustness in phylogenetic reconstruction of ancestral states. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 324:504–516. doi: 10.1002/jez.b.22642

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