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Original Articles

Identification of Bacillus Spores Using Clustering of Principal Components of Fluorescence Data

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Pages 842-848 | Received 13 Apr 2005, Accepted 22 Jul 2005, Published online: 23 Feb 2007

REFERENCES

  • Basilevsky , A. 1994 . Statistical Factor Analysis and Related Methods, Theory and Applications. , New York : John Wiley & Sons .
  • Bellman , R. 1961 . Adaptive Control Processes: A Guided Tour , Princeton , NJ : Princeton University Press .
  • Bonnet , N. 2000 . Artificial Intelligence and Pattern Recognition Techniques in Microscope Image Processing and Analysis . Advances in Imaging and Electron Physics , 114 : 1 – 77 . [CSA]
  • Bronk , B. V. and Reinisch , L. 1993 . Variability of Steady State Bacterial Fluorescence with Respect to Growth Conditions . Appl. Spect. , 47 : 436 – 440 . [CSA] [CROSSREF]
  • Chen , R. and Milligan , G. M. 1996 . Measuring the Influence of Individual Data Points in a Cluster Analysis . J. Classification , 13 : 315 – 335 . [CSA] [CROSSREF]
  • Cheng , Y. S. , Barr , E. B. , Fan , B. J. , Hargis , P. J. , Rader , D. J. , O'Hern , T. J. , Torczynski , J. R. , Tisone , G. C. , Preppernau , B. L. , Young , S. A. and Radloff , R. J. 1999 . Detection of Bioaerosols Using Multivavelength UV Fluorescence Spectroscopy . Aerosol Sci. Technol. , 30 : 186 – 201 . [CSA] [CROSSREF]
  • Coburn , J. T. , Lytle , F. E. and Huber , D. M. 1985 . Identification of Bacterial Pathogens by Laser Excited Fluorescence . Anal. Chem. , 57 : 1669 – 1673 . [CSA] [CROSSREF]
  • Eisen , M. B. , Spellman , P. T. , Brown , P. O. and Botstein , D. 1998 . Cluster Analysis and Display of Genome-Wide Expression Patterns . Proc. Nat. Acad. Sci. USA , 95 : 14863 – 14868 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
  • Everitt , B. S. and Dunn , G. 1992 . Applied Multivariate Data Analysis. , New York : Oxford University Press .
  • Eversole , J. D. , Cary , W. K. Jr. , Scotto , C. S. , Pierson , R. , Spence , M. and Campillo , A. J. 2001 . Continuous Bioaerosol Monitoring using UV Excitation Fluorescence: Outdoor Test Results . Field Anal. Chem. Technol. , 15 : 205 – 212 . [CSA] [CROSSREF]
  • Eversole , J. D. , Hardgrove , J. J. , Cary , W. K. Jr. , Choulas , D. P. and Seaver , M. 1999 . Continuous, Rapid Biological Aerosol Detection with use of UV Fluorescence: Outdoor Test Results . Field Anal. Chem. Technol. , 3 : 249 – 259 . [CSA] [CROSSREF]
  • Gordon , A. D. and De Cata . 1988 . Stability and Influence in Sum of Squares Clustering . Metron. , 46 : 347 – 360 . [CSA]
  • Gray , P. C. , Shokair , I. R. , Rosenthal , S. E. , Tisone , G. C. , Wagner , J. S. , Rigdon , L. D. , Siragusa , G. R. and Heinen , R. J. 1998 . Distinguishabilty of Biological Material by use of Ultraviolet Multispectral Fluorescence . Applied Optics , 37 : 6037 – 6041 . [CSA]
  • Hairston , P. P. , Ho , J. and Quant , F. R. 1997 . Design of an Instrument for Real Time Detection of Aerosols Using Simultaneous Measurements of Particle of Aerodynamic Size and Intrinsic Fluorescence . J. Aerosol Sci. , 28 : 471 – 482 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
  • Hansen , P. and Jaumard , B. 1997 . Cluster Analysis and Mathematical Programming . Mathematical Programming , 79 : 191 – 215 . [CSA] [CROSSREF]
  • Hill , S. C. , Pinnick , R. G. , Niles , S. , Pan , Y. L. , Holler , S. , Chang , R. K. , Bottiger , J. , Chen , B. T. , Orr , C. S. and Feather , G. 1999 . Real-time Measurement of Fluorescence Spectra from Single Airborne Particles . Field Anal. Chem. Technol. , 3 : 221 – 239 . [CSA] [CROSSREF]
  • Hybl , J. D. , Lithgow , G. A. and Buckley , S. G. 2003 . Laser-Induced Breakdown Spectroscopy Detection and Classification of Biological Aerosols . Applied Spectroscopy , 57 : 1207 – 1215 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
  • Jackson , J. E. 2003 . A User's Guide to Principal Components. , New York : John Wiley & Sons .
  • Jenson , S. K. and Walty , F. A. 1979 . Principal Components Analysis and Canonical Analysis in Remote Sensing . Proc. Annual. Am. Soc. Photogrammetry , : 79 – 143 . [CSA]
  • Jolliffe , I. T. , Jones , B. and Morgan , B. J. T. 1988 . “ Stability and Influence in Cluster Analysis ” . In Data Analysis and informatics , Edited by: Diday , E. pp. 507 – 514 . Amsterdam : North-Holland .
  • Kaiser , H. F. 1960 . The Application of Electronic Computers to Factor Analysis . Educational and Psychological Measurement , 20 : 141 – 151 . [CSA]
  • Kaufman , L. and Rousseeuw , P. J. 1990 . Finding Groups in Data. An Introduction to Cluster Analysis , New York : Wiley–Interscience .
  • Leblanc , L. and Dufour , E. 2002 . Monitoring the Identity of Bacteria Using Their Intrinsic Fluorescence . FEMS Microbiology Letters , 211 : 147 – 153 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
  • Reinisch , L. , Tribble , J. , Werkhaven , J. A. and Ossoff , R. H. 1994 . Non–Invasive Optical Diagnosis of Bacteria Causing Otitis Media . Laryngoscope , 104 : 264 – 268 . [PUBMED] [INFOTRIEVE] [CSA]
  • Rossi , T. M. and Warner , I. M. 1985 . “ Bacterial Identification Using Fluorescence Spectroscopy ” . In Rapid Detection and Identification of Microorganisms , Edited by: Nelson , W. H. pp. 1 – 50 . Weinheim , , Germany : Verlag Chemie .
  • Saltiel , J. , Sears , D. F. , Choi , Y. O. , Sun , Y. P. and Eaker , D. W. 1994 . Fluorescence, Fluorescence-Excitation, and Ultraviolet Absorption Spectra of Trans-1-(2-naphthyl)-2-phenylethene Conformers . J. Phys. Chem. , 98 : 35 – 46 . [CSA] [CROSSREF]
  • Samuels , A. C. , DeLucia , F. C. Jr. , McNesby , K. L. and Miziolek , A. W. 2003 . Laser-Induced Breakdown Spectroscopy of Bacterial Spores, Molds, Pollens and Protein: Initial Studies of Discrimination Potential . Applied Optics , 42 : 6205 – 6209 . [PUBMED] [INFOTRIEVE] [CSA]
  • Scully , M. O. , Kattawar , G. W. , Lucht , R. P. , Opatrny , T. , Pilloff , H. , Rebane , A. , Sokolov , A. V. and Zubairy , M. S. 2002 . FAST CARS: Engineering a Laser Spectroscopic Technique for Rapid Identification of Bacterial Spores . Proc. Nat. Acad. Sci. USA , 99 : 10994 – 11001 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
  • Seaver , M. , Eversole , J. D. , Hardgrove , J. J. , Cary , W. K. Jr. and Roselle , D. C. 1999 . Size and Fluorescence Measurements for Field Detection of Bioaerosols . Aerosol Sci. Technol. , 30 : 174 – 185 . [CSA] [CROSSREF]
  • Sorrel , M. J. , Tribble , J. , Reinisch , L. , Werkhaven , J. A. and Ossoff , R. H. 1994 . Bacteria Identification of Otitis Media with Fluorescence Spectroscopy . Lasers Surg. Med. , 14 : 155 – 163 . [CSA]
  • Spector , B. C. , Reinisch , L. , Smith , D. and Werkhaven , J. A. 2000 . Non-invasive Fluorescent Identification of Bacteria Causing Acute Otitis Media in a Chinchilla Model . Laryngoscope , 110 : 1119 – 1123 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]
  • Sun , Y. P. , Sears , D. F. and Saltiel , J. 1987 . Three-Component Self-Modeling Technique Applied to Luminescence Spectra . Anal. Chem. , 59 : 2515 – 2519 . [CSA] [CROSSREF]
  • Vasanthi , S. , Huston , A. L. , Scotto , C. and Eversole , J. D. 2004 . Multiple UV Wavelength Excitation and Fluorescence of Bio Aerosols . Optics Express , 12 : 4457 – 4466 . [CSA] [CROSSREF]
  • Yeung , K. Y. and Ruzzo , W. L. 2001 . Principal Component Analysis for Clustering Gene Expression Data . Bioinformatics , 17 : 763 – 774 . [PUBMED] [INFOTRIEVE] [CSA] [CROSSREF]

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