Characterisation of phytoplasma (16SrVI) associated with little leaf disease of Portulaca grandiflora – An in silico analysis

References

• Ajayakumar , P V , Samad , A , Shasany , A K , Gupta Mahesh , K , Alam , M and Rastogi , S . 2007 . First record of a Candidatus phytoplasma associated with little leaf disease of Portulaca grandiflora . Aust Plant Dis Notes , 2 : 67 – 69 .
   Google Scholar
• Arocha , Y , Lopez , M , Pinol , B , Fernandez , M and Jones , P . 2005 . Candidatus Phytoplasma graminis and Candidatus Phytoplasma caricae two novel phytoplasmas associated with diseases of sugarcane, weeds and papaya in Cuba . Int J Syst Evol Microbiol , 55 : 2451 – 2463 .
   PubMed Web of Science ®Google Scholar
• Bertaccini , A , Fránová , J , Botti , S and Tabanelli , D . 2005 . Molecular characterization of phytoplasmas in lilies with fasciation in the Czech Republic . FEMS Microbiol Lett , 249 : 79 – 85 .
   PubMed Web of Science ®Google Scholar
• Bhat , A I , Madhubala , R , Hareesh , P S and Anadaraj , M . 2006 . Detection and characterization of the phytoplasma associated with a phyllody disease of black pepper (Piper nigrum) in India . Sci Hortic , 107 : 200 – 204 .
   Google Scholar
• Ciuffo , M and Turina , M . 2004 . A Potexvirus related to papaya mosaic virus isolated from moss rose (Portulaca grandiflora) in Italy . Plant Pathol , 53 : 515
   Google Scholar
• Davis , R E , Dally , E L , Gundersen , D E , Lee , I M and Habili , N . 1997 . Candidatus Phytoplasma australiense a new phytoplasma taxon associated with Australian grapevine yellows . Int J Syst Bacteriol , 47 : 262 – 269 .
   PubMedGoogle Scholar
• Deng , S and Hiruki , C . 1991 . Amplification of 16S rRNA genes from culturable and non-culturable mollicutes . J Microbiol Methods , 14 : 53 – 61 .
   Web of Science ®Google Scholar
• Griffiths , H M , Sinclair , W A , Smart , C D and Davis , R E . 1999 . The phytoplasma associated with ash yellows and lilac witches-broom: Candidatus Phytoplasma fraxini . Int J Syst Bacteriol , 49 : 1605 – 1614 .
   PubMedGoogle Scholar
• Gundersen , D E and Lee , I M . 1996 . Ultrasensitive detection of phytoplasmas by nested PCR assays using two universal primer pairs . Phytopathol Mediter , 35 : 144 – 51 .
   Google Scholar
• Gupta M , K , Samad , A , Shasany , A K , Ajayakumar , P V and Alam , M . 2010 . First report of a 16SrVI ‘Candidatus Phytoplasma trifolii’ isolate infecting Norfolk Island pine (Araucaria heterophylla) in India . Plant Pathol , 59 : 399
   Google Scholar
• Hennessy , C , Walduck , G , Daly , D and Padovan , A . 2005 . Weed hosts of Fusarium oxysporum F. sp. cubence tropical race 4 in northern Australia . Aust Plant Pathol , 34 : 115 – 117 .
   Web of Science ®Google Scholar
• Hiruki , C and Wang , K . 2004 . Clover proliferation phytoplasma: Candidatus Phytoplasma trifolii . Int J Syst Evol Microbiol , 54 : 1349 – 1353 .
   PubMedGoogle Scholar
• Ho , K C , Tsai , C C and Chung , T L . 2001 . Organization of ribosomal RNA genes from a Loofah witches' broom phytoplasma . DNA Cell Biol , 20 : 115 – 122 .
   PubMed Web of Science ®Google Scholar
• Jung , H Y , Sawayanagi , T , Kakizawa , S , Nishigawa , H and Namba , S . 2002 . Candidatus Phytoplasma castaneae, a novel phytoplasma taxon associated with chestnut witches' broom disease . Int J Syst Evol Microbiol , 52 : 1543 – 1549 .
   PubMedGoogle Scholar
• Jung , H Y , Sawayanagi , T , Wongkaew , P , Kakizawa , S , Nishigawa , H , Wei , W , Oshima , K , Miyata , S , Ugaki , M , Hibi , T and Namba , S . 2003 . ‘Candidatus Phytoplasma oryzae’, a novel phytoplasma taxon associated with rice yellow dwarf disease . Int J Syst Evol Microbiol , 53 : 1925 – 1929 .
   PubMedGoogle Scholar
• Kamilia , A EH , Seoud , A EL , Michael , C B , Shoeib , N and Colin , W W . 2003 . Evaluation of some Epyptian plant species for in vitro Antimycobacterial and cytotoxic activities . Pharmaceut Biol , 41 : 463 – 465 .
   Google Scholar
• Khanuja , S PS , Shasany , A K , Darokar , M P and Kumar , S . 1999 . Rapid isolation of DNA from dry and fresh samples of plants producing large amounts of secondary metabolites and essential oils . Plant Mol Biol Report , 17 : 74
   Web of Science ®Google Scholar
• Lee , I M , Gundersen-Rindal , D E , Davis , R E , Bottner , K D and Seemüller , E . 2004 . Candidatus Phytoplasma asteris, a novel phytoplasma taxon associated with aster yellows and related diseases . Int J Syst Evol Microbiol , 54 : 1037 – 1048 .
   PubMed Web of Science ®Google Scholar
• Lee , I M , Gundersen-Rindal , D E , Davis , R E and Bartoszyk , I M . 1998 . Revised classification scheme of phytoplasmas based on RFLP analysis of 16S rRNA and ribosomal protein gene sequences . Int J Syst Bacteriol , 48 : 1153 – 1169 .
   Google Scholar
• Lee , I M , Bottner , K D , Secor , G and Rivera-Varas , V . 2006 . Candidatus Phytoplasma americanum, a phytoplasma associated with a potato purple top wilt disease complex . Int J Syst Evol Microbiol , 56 : 1593 – 1597 .
   PubMedGoogle Scholar
• Marcone , C , Gibb , K S , Streten , C and Schneider , B . 2004 . Candidatus Phytoplasma spartii, Candidatus Phytoplasma rhamni and Candidatus Phytoplasma allocasuarinae, respectively associated with spartium witches'-broom, buckthorn witches'-broom and allocasuarina yellows disease . Int J Syst Evol Microbiol , 54 : 1025 – 1029 .
   PubMed Web of Science ®Google Scholar
• Martini , M , Lee , I M , Bottner , K D , Zhao , Y , Botti , S , Bertaccini , A , Harrison , N A , Carraro , L , Marcone , C , Khan , A J and Osler , R . 2007 . Ribosomal protein gene-based phylogeny for finer differentiation and classification of phytoplasmas . Int J Syst Evol Microbiol , 57 : 2037 – 2051 .
   PubMedGoogle Scholar
• Montano , H G , Davis , R E , Dally , E L , Hogenhout , S and Brioso , S T . 2001 . Candidatus Phytoplasma brasiliense, a new phytoplasma taxon associated with hibiscus witches' broom disease . Int J Syst Evol Microbiol , 51 : 1109 – 1118 .
   PubMedGoogle Scholar
• Navas , ML , Nathalie , F and Jacque , M . 1998 . Influence of cucumber mosaic virus infection on the growth response of Portulaca oleracea (purslane) and Stellaria media (chickweed) to nitrogen availability . New Phytol , 139 : 301 – 309 .
   Google Scholar
• Samad , A , Ajayakumar , P V , Shasany , A K , Gupta , Mahesh , K , Alam , M and Rastogi , S . 2008 . Occurrence of a clover proliferation (16SrVI) group phytoplasma associated with little leaf disease of Portulaca grandiflora in India . Plant Dis , 92 : 832
   PubMedGoogle Scholar
• Samad , A , Shasany , A K , Gupta , S , Ajayakumar , P V , Darokar , M P and Khanuja , S PS . 2006 . First report of a 16SrVI group Phytoplasma associated with witches broom disease on Withania somnifera . Plant Dis , 90 : 248
   PubMed Web of Science ®Google Scholar
• Sato , M , Kenji , W and Yoko , S . 2001 . Pseudomonas syringae pv. Solidagao pv. nov., the causal agent of bacterial leaf spot of Tall Goldenrod Solidgo altissima L . J Gen Plant Pathol , 67 : 303 – 308 .
   Google Scholar
• Schneider , B , Marcone , C , Kampmann , M , Ragozzino , A , Lederer , W , Cousin , M T and Seemuller , E . 1997 . Characterisation and classification of phytoplasmas from wild and cultivated plants by RFLP and sequence analysis of ribosomal DNA . Eur J Plant Pathol , 103 : 675 – 686 .
   Google Scholar
• Schneider , B , Torres , E , Martin , M P , Schroder , M and Seemuller , E . 2005 . Candidatus Phytoplasma pini, a novel taxon from Pinus silvestris and Pinus halepensis . Int J Syst Evol Microbiol , 55 : 303 – 307 .
   PubMedGoogle Scholar
• Seemuller , E and Schneider , B . 2004 . Candidatus Phytoplasma mali, Candidatus Phytoplasma pyri and Candidatus Phytoplasma prunorum, the causal agents of apple proliferation, pear decline and European stone fruit yellows, respectively . Int J Syst Evol Microbiol , 54 : 1217 – 1226 .
   PubMed Web of Science ®Google Scholar
• Siddique , A BM , Agrawal , G K , Alam , L and Krishna-Reddy , M . 2001 . Electron microscopy and molecular characterization of phytoplasma associated with little leaf disease of brinjal (Solanum melongena L.) and periwinkle (Catharanthus roseus) in Bangladesh . J Phytopathol , 149 : 237 – 244 .
   Web of Science ®Google Scholar
• Verdin , E , Salar , P , Danet , J L , Choueiri , E and Jreijiri , F . 2003 . Candidatus Phytoplasma phoenicium sp., nov., a novel phytoplasma associated with an emerging lethal disease of almond trees in Lebanon and Iran . Int J Syst Evol Microbiol , 5 : 833 – 838 .
   Google Scholar
• Walker , G E , Gobonand , J and Nobbs , J . 2002 . New Australian record of Meloidogyne javanica on Portulaca oleracea (pigweed) . Aust Plant Pathol , 31 : 301
   Google Scholar
• Wei , W , Davis , R E , Lee , I M and Yan , Z . 2007 . Computer-simulated RFLP analysis of 16S rRNA genes: identification of ten new phytoplasma groups . Int J Syst Evol Microbiol , 57 : 1855 – 1867 .
   PubMed Web of Science ®Google Scholar
• Zreik , L , Carle , P , Bove , J M and Garnier , M . 1995 . Characterization of the mycoplasma like organism associated with witches'-broom disease of lime and proposition of a Candidatus taxon for the organism, Candidatus Phytoplasma aurantifolia . Int J Syst Bacteriol , 45 : 449 – 453 .
   PubMedGoogle Scholar