REFERENCES

• Abell , R. , Thieme , M. L. , Revenga , C. , Bryer , M. , Kottelat , M. , Bogutskaya , N. , Coad , B. , Mandrak , N. , Balderas , S. C. , Bussing , W. , Stiassny , M. L. J. , Skelton , P. , Allen , G. R. , Unmack , P. , Naseka , A. , Ng , R. , Sindorf , N. , Robertson , J. , Armijo , E. , Higgins , J. V. , Heibel , T. J. , Wikramanayake , E. , Olson , D. , Lopez , H. L. , Reis , R. E. , Lundberg , J. G. , Perez , M. H. S. and Petry , P. 2008 . Freshwater ecoregions of the world: a new map of biogeographic units for freshwater biodiversity conservation . BioScience , 58 ( 5 ) : 403 – 414 .
   Web of Science ®Google Scholar
• Acuña , V. and Tockner , K. 2009 . Surface-subsurface water exchange rates along alluvial river reaches control the thermal patterns in an alpine river network . Freshwater Biology , 54 ( 2 ) : 306 – 320 .
   Web of Science ®Google Scholar
• Arino , O. , Gross , D. , Ranera , F. , Bourg , L. , Leroy , M. , Bicheron , P. , Latham , J. , Gregorio , A. D. , Brockman , C. , Witt , R. , Defourny , P. , Vancutsem , C. , Herold , M. , Sambale , J. , Archard , F. , Duriex , L. , Plummer , S. and Weber , J. 2007 . Pages 2412–2415 in Geoscience and Remote Sensing Symposium, 2007 , IEEE International . IGARSS 2007.
   Google Scholar
• Augerot , X. and Foley , D. N. 2005 . Atlas of Pacific salmon: the first map-based status assessment of salmon in the North Pacific , Berkeley : University of California Press .
   Google Scholar
• Beechie , E. M. and Henderson , R. 2005 . A classification of habitat types in a large river and their use by juvenile salmonids . Transactions of the American Fisheries Society , 134 : 717 – 729 .
   Web of Science ®Google Scholar
• Beechie , T. J. , Sear , D. A. , Olden , J. D. , Pess , G. R. , Buffington , J. M. , Moir , H. , Roni , P. and Pollock , M. M. 2010 . Process-based principles for restoring river ecosystems . BioScience , 60 ( 3 ) : 209 – 222 .
   Web of Science ®Google Scholar
• Benda , L. E. , Miller , D. J. , Andras , K. , Bigelow , P. , Reeves , G. and Michael , D. 2007 . NetMap: a new tool in support of watershed science and resource management . Forest Science , 52 : 206 – 219 .
   Google Scholar
• Benda , L. E. , Poff , N. L. , Miller , D. , Dunne , T. , Reeves , G. , Pess , G. and Pollock , M. 2004 . The network dynamics hypothesis: how channel networks structure riverine habitats . BioScience , 54 ( 5 ) : 413 – 427 .
   Web of Science ®Google Scholar
• Bisson , P. A. , Dunham , J. B. and Reeves , G. H. 2009 . Freshwater ecosystems and resilience of Pacific salmon: habitat management based on natural variability . Ecology and Society , 14 ( 1 ) : 45 http://www.ecologyandsociety.org/vol14/issu1/art45
   Web of Science ®Google Scholar
• Burnett , K. M. , Reeves , G. H. , Miller , D. J. , Clarke , S. , Vance-Borland , K. and Christiansen , K. 2007 . Distribution of salmon-habitat potential relative to landscape characteristics and implications for conservation . Ecological Applications , 17 ( 1 ) : 66 – 80 .
   PubMed Web of Science ®Google Scholar
• Eberle , L. C. and Stanford , J. A. 2010 . Importance and seasonal availability of terrestrial invertebrates as prey for juvenile salmonids on the in floodplain spring brooks of the Kol River (Kamchatka, Russian Federation) . River Research and Applications , 26 ( 6 ) : 682 – 694 .
   Web of Science ®Google Scholar
• Elsner , M. , Cuo , L. , Voisin , N. , Deems , J. , Hamlet , A. , Vano , J. , Mickelson , K. , Lee , S.-Y. and Lettenmaier , D. 2010 . Implications of 21st century climate change for the hydrology of Washington State . Climatic Change , 102 ( 1 ) : 225 – 260 .
   Web of Science ®Google Scholar
• Finney , B. P. , Gregory-Eaves , I. , Sweetman , J. , Douglas , M. S. V. and Smol , J. P. 2000 . Impacts of climatic change and fishing on Pacific salmon abundance over the past 300 years . Science , 290 : 795 – 799 .
   PubMed Web of Science ®Google Scholar
• Gregory , S. V. and Bisson , P. A. 1997 . “ Degradation and loss of anadromous salmonid habitat in the Pacific Northwest ” . In Pacific salmon and their ecosystems, status and future options , Edited by: Stouder , D. J. , Bisson , P. A. and Naiman , R. J. 277 – 314 . New York : Chapman and Hall .
   Google Scholar
• Gustafson , R. G. , Waples , R. S. , Myers , J. M. , Weitkamp , L. , Bryant , G. J. , Johnson , O. W. and Hard , J. J. 2007 . Pacific salmon extinctions: quantifying lost and remaining diversity . Conservation Biology , 21 : 1009 – 1020 .
   PubMed Web of Science ®Google Scholar
• Horton , R. E. 1945 . Erosional development of streams and their drainage basins: hydrophysical approach to quantitative morphology . Bulletin of the Geological Society of America , 56 : 275 – 370 .
   Web of Science ®Google Scholar
• Huntington , C. , Nehlsen , W. and Bowers , J. 1996 . A survey of healthy native stocks of anadromous salmonids in the Pacific Northwest and California . Fisheries , 21 ( 3 ) : 6 – 14 .
   Web of Science ®Google Scholar
• IPCC (Intergovernmental Panel on Climate Change). 2007 . Climate change 2007: the physical science basis Contribution of Working Group 1 to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change, Cambridge, UK.
   Google Scholar
• Lehner , B. and Doll , P. 2004 . Development and validation of global database of lakes, reservoirs and wetlands . Journal of Hydrology , 296 : 1 – 22 .
   Web of Science ®Google Scholar
• Lichatowich , J. 1999 . Salmon without rivers: a history of the Pacific salmon crisis , Washington, D.C. : Island Press .
   Google Scholar
• Luck , M. A. , Maumenee , N. , Whited , D. , Lucotch , J. , Chilcote , S. , Lorang , M. , Goodman , D. , McDonald , K. , Kimball , J. and Stanford , J. 2010 . Remote sensing analysis of physical complexity of North Pacific Rim rivers to assist wild salmon conservation . Earth Surface Processes and Landforms , 35 : 1330 – 1342 .
   Web of Science ®Google Scholar
• Lunetta , R. S. , Cosentino , B. L. , Montgomery , D. R. , Beamer , E. M. and Beechie , T. J. 1997 . GIS-based evaluation of salmon habitat in the Pacific Northwest . Photogrammetric Engineering and Remote Sensing , 63 ( 10 ) : 1219 – 1229 .
   Web of Science ®Google Scholar
• Maidment , D. R. 2002 . ArcHydro: GIS for water resources , Redlands, CA : ESRI Press .
   Google Scholar
• Mantua , N. , Tohver , I. and Hamlet , A. 2010 . Climate change impacts on streamflow extremes and summertime stream temperature and their possible consequences for freshwater salmon habitat in Washington State . Climatic Change , 102 ( 1 ) : 187 – 223 .
   Web of Science ®Google Scholar
• Mantua , N. J. and Francis , R. C. 2004 . “ Natural climate insurance for Pacific Northwest salmon and salmon fisheries: finding our way through the entangled bank ” . In Fish in our future? Perspectives on fisheries sustainability , Edited by: Knudsen , E. E. and MacDonald , D. 127 – 140 . Bethesda, Maryland : American Fisheries Society .
   Google Scholar
• McHenry , M. L. and Pess , G. R. 2008 . An overview of monitoring options for assessing the response of salmonids and their aquatic ecosystems in the Elwha River following dam removal . Northwest Science , 82 : 29 – 47 .
   Web of Science ®Google Scholar
• NRC (National Research Council). 1996 . The Bering Sea ecosystem , Washington, D.C. : National Academies Press .
   Google Scholar
• Nehlsen , W. , Williams , J. E. and Lichatowich , J. A. 1991 . Pacific salmon at the crossroads: stocks at risk from California, Oregon, Idaho and Washington . Fisheries , 16 ( 2 ) : 4 – 21 .
   Web of Science ®Google Scholar
• Phelan , S. 2003 . A Pacific Rim approach to salmon management: redefining the role of Pacific salmon international consensus . Environment Law , 33 : 247 – 289 .
   Google Scholar
• Pinsky , M. L. , Springmeyer , D. B. , Goslin , M. N. and Augerot , X. 2009 . Range-wide selection of catchments for Pacific salmon conservation . Conservation Biology , 23 ( 3 ) : 680 – 691 .
   PubMed Web of Science ®Google Scholar
• Quinn , T. P. 2005 . The behavior and ecology of Pacific salmon and trout , Seattle : University of Washington .
   Google Scholar
• Ruggerone , G. , Agler , B. A. and Molyneaux , D. B. 2010 . Productivity of Kuskokwim juvenile coho, 2010 Arctic Yukon Kuskokwim Sustainable Salmon Initiative Project product Available: http://69.93.224.39/∼aykssi/wp-content/uploads/805-Ruggerone-FR.pdf. (June 2011).
   Google Scholar
• Sanderson , E. W. , Jaiteh , M. , Levy , M. A. , Redford , K. H. , Wannebo , A. V. and Woolmer , G. 2002 . The human footprint and the last of the wild . BioScience , 52 ( 10 ) : 891 – 904 .
   Web of Science ®Google Scholar
• Schindler , D. E. , Scheuerell , M. D. , Moore , J. W. , Gende , S. M. , Francis , T. B. and Palen , W. J. 2003 . Pacific salmon and the ecology of coastal ecosystems . Frontiers in Ecology and Environment , 1 ( 1 ) : 31 – 37 .
   Web of Science ®Google Scholar
• Stanford , J. A. , Gayeski , N. J. , Pavlov , D. S. , Savvaitova , K. A. and Kuzishchin , K. V. 2003 . Biophysical complexity of the Krutogorova River (Kamchatka, Russia) . Verhandlungen des Internationalen Verein Limnologie , 28 ( 3 ) : 1354 – 1361 .
   Google Scholar
• Stanford , J. A. , Hauer , F. R. , Gregory , S. V. and Snyder , E. B. 2005a . “ The Columbia River ” . In Rivers of North America , Edited by: Benke , A. C. and Cushing , C. E. 591 – 653 . Boston : Elsevier/Academic Press .
   Google Scholar
• Stanford , J. A. , Lorang , M. S. and Hauer , F. R. 2005b . The shifting habitat mosaic of river ecosystems . Verhandlungen des Internationalen Verein Limnologie , 29 ( 1 ) : 123 – 136 .
   Google Scholar
• Strahler , A. N. 1952 . Hypsometric (area-altitude) analysis of erosional topography . Geological Society of America Bulletin , 63 : 1117 – 1142 .
   Web of Science ®Google Scholar
• U.S. Environmental Protection Agency. 2003 . EPA Region 10 guidance for Pacific Northwest state and tribal temperature water quality standards EPA Region 10 Office of Water, Report 910-B-03-002.
   Google Scholar
• Whited , D. C. , Kimball , J. S. , Lorang , M. S. and Stanford , J. A. 2011 . Estimation of juvenile salmon habitat in Pacific Rim rivers using multiscalar remote sensing and geospatial analysis River Research and Applications. DOI: 10.1002/rra.1585.
   Google Scholar
• Zabel , R. W. , Scheuerell , M. D. , McClure , M. M. and Williams , J. G. 2006 . The interplay between climate variability and density dependence in the population viability of Chinook salmon . Conservation Biology , 20 ( 1 ) : 190 – 200 .
   PubMed Web of Science ®Google Scholar