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Bacteria and phytoplasmas/Bactéries et phytoplasmes

Detection and quantification of ‘Candidatus Phytoplasma asterisʼ and ‘Candidatus Liberibacter asiaticusʼ at early and late stages of Huanglongbing disease development

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Pages 411-421 | Accepted 27 Sep 2016, Published online: 05 Dec 2016

References

  • Angelini E, Luca Bianchi G, Filippin L, Morassutti C, Borgo M. 2007. A new TaqMan method for the identification of phytoplasmas associated with grapevine yellows by real-time PCR assay. J Microbiol Meth. 68:613–622.
  • Arocha Y, Lopez M, Pinol B, Fernandez M, Picornell B, Almeida R, Palenzuela I, Wilson MR, Jones P. 2005. ‘Candidatus Phytoplasma graminis’ and ‘Candidatus Phytoplasma caricae’, two novel phytoplasmas associated with diseases of sugarcane, weeds and papaya in Cuba. Int J Syst Evol Microbiol. 55:2451–2463.
  • Arratia-Castro AA, Santos-Cervantes ME, Fernández-Herrera E, Chávez-Medina JA, Flores-Zamora GL, Camacho-Beltrán E, Mendez-Lozano J, Leyva-López NE. 2014. Occurrence of ‘Candidatus Phytoplasma asteris’ in citrus showing Huanglongbing symptoms in Mexico. Crop Prot. 62:144–151.
  • Baric S, Berger J, Cainelli C, Kerschbamer C, Letschka T, Dalla-Via J. 2011. Seasonal colonization of apple trees by ‘Candidatus Phytoplasma mali’ revealed by a new quantitative TaqMan real-time PCR approach. Eur J Plant Pathol. 129:455–467.
  • Baric S, Dalla-Via J. 2004. A new approach to apple proliferation detection: a highly sensitive real-time PCR assay. J Microbiol Meth. 57:135–145.
  • Berges R, Rott M, Seemüller E. 2000. Range of phytoplasma concentrations in various plant hosts as determined by competitive polymerase chain reaction. Phytopathology. 90:1145–1152.
  • Bertaccini A. 2007. Phytoplasmas: diversity, taxonomy, and epidemiology. Front Biosci. 12:673–689.
  • Bertaccini A, Duduk B. 2009. Phytoplasma and phytoplasma diseases: a review of recent research. Phytopathol Mediterr. 48:355–378.
  • Bové JM. 2006. Huanglongbing: a destructive, newly-emerging, century-old disease of citrus. J Plant Pathol. 88:7–37.
  • Chen J, Chang CJ, Jarre RL. 1992. DNA probes as molecular markers to monitor the seasonal occurrence of walnut witches’ broom mycoplasmalike organism. Plant Dis. 76:1116–1119.
  • Chen J, Pu X, Deng X, Liu S, Li H, Civerolo E. 2009. A phytoplasma related to ‘Candidatus Phytoplasma asteris’ detected in citrus showing huanglongbing (yellow shoot disease) symptoms in Guangdong, P. R. China. Phytopathology. 99:236–242.
  • Christensen NM, Nicolaisen M, Hansen M, Schulz A. 2004. Distribution of phytoplasmas in infected plants as revealed by real-time PCR and bioimaging. Mol Plant-Microbe Interact. 17:1175–1184.
  • Córdova I, Oropeza C, Puch-Hau C, Harrison N, Collí-Rodríguez A, Narvaez M, Nic-Matos G, Reyes C, Sáenz L. 2014. A real-time PCR assay for detection of coconut lethal yellowing phytoplasmas of group 16SrIV subgroups A, D and E found in the Americas. J Plant Pathol. 96:343–352.
  • Crosslin JM, Vandemark GJ, Munyaneza JE. 2006. Development of a real-time, quantitative PCR for detection of the Columbia Basin potato purple top phytoplasma in plants and beet leafhoppers. Plant Dis. 90:663–667.
  • Davis RE, Zhao Y, Dally EL, Lee I-M, Jomantiene R, Douglas SM. 2013. ‘Candidatus Phytoplasma pruni’, a Novel Taxon Associated with X-Disease of Stone Fruits, Prunus spp.: multilocus Characterization Based on 16S rRNA, secY, and Ribosomal Protein Genes. Int J Syst Evol Microbiol. 63:766–776.
  • Douglas SM. 1986. Detection of mycoplasma like organisms in peach and chokecherry with X-disease by fluorescence microscopy. Phytopathology. 76:784–787.
  • Errea P, Aguelo V, Hormaza JI. 2002. Seasonal variations in detection and transmission of pear decline phytoplasma. J Phytopathol. 150:439–443.
  • Folimonova SY, Achor DS. 2010. Early events of citrus greening (Huanglongbing) disease development at the ultrastructural level. Phytopathology. 100:949–958.
  • Frost KE, Willis DK, Groves RL. 2011. Detection and variability of aster yellows phytoplasma titer in its insect vector, Macrosteles quadrilineatus (Hemiptera: Cicadellidae). J Econ Entomol. 104:1800–1815.
  • Galetto L, Bosco D, Marzachì C. 2005. Universal and group-specific realtime PCR diagnosis of Flavescence dorée (16SrV), Bois noir (16SrXII) and apple proliferation (16SrX) phytoplasmas from field-collected plant hosts and insect vectors. Ann Appl Biol. 147:191–201.
  • Gottwald TR. 2010. Current epidemiological understanding of citrus Huanglongbing. Annu Rev Phytopathol. 48:119–139.
  • Gundersen DE, Lee IM. 1996. Ultrasensitive detection of phytoplasmas by nested- PCR assays using two universal primer pair. Phytopathol Mediterr. 35:144–151.
  • Gundersen DE, Lee I-M, Rehner SA, Davis RE, Kingsbury DT. 1994. Phylogeny of mycoplasmalike organisms (Phytoplasmas): a basis for their classification. J Bacteriol. 176:5244–5254.
  • Harrison NA, Womack M, Carpio ML. 2002. Detection and characterization of a lethal yellowing (16SrIV) Group phytoplasma in Canary Island date palms affected by lethal decline in Texas. Plant Dis. 86:676–681.
  • Herath P, Hoover GA, Angelini E, Moorman GW. 2010. Detection of elm yellows phytoplasma in elms and insects using real-time PCR. Plant Dis. 94:1355–136060.
  • Hodgetts J, Boonham N, Mumford R, Dickinson M. 2009. Panel of 23S rRNA gene-based real-time PCR assays for improved universal and group-specific detection of phytoplasmas. Appl Environ Microbiol. 75:2945–2950.
  • Hoshi A, Ishii Y, Kakizawa S, Oshima K, Namba S. 2007. Host-parasite interaction of phytoplasmas from a molecular biological perspective. Bull Insectology. 60:105.
  • Hren M, Boben J, Rotter A, Kralj P, Gruden K, Ravnikar M. 2007. Real-time PCR detection system for Flavescence dorée and Bois noir phytoplasmas in grapevine: comparison with conventional PCR detection and application in diagnostics. Plant Pathol. 56:785–796.
  • Jagoueix S, Bové JM, Garnier M. 1996. PCR detection of the two ‘Candidatus’ liberobacter species associated with greening disease of citrus. Mol Cell Probes. 10:43–50.
  • Jawhari M, Abrahamian P, Sater AA, Sobh H, Tawidian P, Abou-Jawdah Y. 2015. Specific PCR and real-time PCR assays for detection and quantitation of ‘Candidatus Phytoplasma phoenicium’. Mol Cell Probes. 29:63–70.
  • Jomantiene R, Davis RE, Maas J, Dally EL. 1998. Classification of new phytoplasmas associated with diseases of strawberry in Florida, based on analysis of 16S rRNA and ribosomal protein gene operon sequences. Int J Syst Evol Microbiol. 48:269–277.
  • Liao XL, Zhu SF, Chen HY, Huang WS, Luo K, Zhao WJ, Ma RQ. 2002. Establishment of real-time fluorescent PCR method with TaqMan probe for phytoplasma detection and identification. Acta Phytopathol Sin. 32:361–367.
  • Lin H, Chen C, Doddapaneni H, Duan Y, Civerolo EL, Bai X, Zhao X. 2010. A new diagnostic system for ultrasensitive and specific detection and quantitation of ‘Candidatus Liberibacter asiaticus’, the bacterium associated with citrus Huanglongbing. J Microbiol Meth. 81:17–25.
  • Lopes SA, Frare GF, Bertolini E, Cambra M, Fernandes NG, Ayres AJ, Marin DR, Bové JM. 2009. Liberibacters associated with citrus huanglongbing in Brazil: ‘Candidatus Liberibacter asiaticus’ is heat tolerant, ‘Ca. L. americanus’ is heat sensitive. Plant Dis. 93:257–262.
  • Lou B, Bai X, Bai Y, Deng C, RoyChowdhury M, Chen C, Song Y. 2014. Detection and Molecular Characterization of a 16SrII‐A Phytoplasma in Grapefruit (Citrus paradisi) with Huanglongbing‐like Symptoms in China. J Phytopathol. 162:387–395.
  • Marcone C, Seemüller E. 2001. A chromosome map of the European stone fruit yellows phytoplasma. Microbiology. 147:1213–1221.
  • Marzachì C. 2004. Molecular diagnosis phytoplasmas. Phytopathol Mediterr. 43:228–231.
  • Marzachì C, Bosco D. 2005. Relative quantification of chrysanthemum yellows (16SrI) phytoplasma in its plant and insect host using real-time polymerase chain reaction. Mol Biotechnol. 30:117–127.
  • Monti M, Martini M, Tedeschi R. 2013. EvaGreen Real-time PCR protocol for specific Candidatus Phytoplasma mali detection and quantification in insects. Mol Cell Probes. 27:129–136.
  • Nikolić P, Mehle N, Gruden K, Ravnikar M, Dermastia M. 2010. A panel of real-time PCR assays for specific detection of three phytoplasmas from the apple proliferation group. Mol Cell Probes. 24:303–309.
  • Oropeza C, Cordova I, Chumba A, Narváez M, Sáenz L, Ashburner R, Harrison N. 2011. Phytoplasma distribution in coconut palms affected by lethal yellowing disease. Ann Appl Biol. 159:109–117.
  • Oshima K, Kakizawa S, Nishigawa H, Jung HY, Wei W, Suzuki S, Arashida R, Nakata D, Miyata S, Ugaki M, Namba S. 2004. Reductive evolution suggested from the complete genome sequence of a plant-pathogenic phytoplasma. Nat Genet. 36:27–29.
  • Pelletier C, Sala P, Gillet J, Cloquemin G, Very P, Foissac X, Malembic-Maher S. 2009. Triplex real-time PCR assay for sensitive and simultaneous detection of grapevine phytoplasmas of the 16SrV and 16SrXII-A groups with an endogenous analytical control. Vitis. 48:87–95.
  • Sahashi N, Nakamura H, Yoshikawa N, Kubono T, Shoji T, Takahashi T. 1995. Distribution and seasonal variation in detection of phytoplasma in bark phloem tissues of single Paulownia trees infected with witches’ broom. Ann Phytopathol Soc Japan. 61:481–484.
  • Santos-Cervantes ME, Chávez-Medina JA, Acosta-Pardini J, Flores-Zamora GL, Méndez-Lozano J, Leyva-López NE. 2010. Genetic diversity and geographical distribution of phytoplasmas associated with potato purple top disease in Mexico. Plant Dis. 94:388–395.
  • Schneider B, Seemüller E. 1994. Presence of two sets of ribosomal genes in phytopathogenic mollicutes. Appl Environ Microbiol. 60:3409–3412.
  • Seemüller E, Kunze L, Schaper U. 1984a. Colonization behavior of MLO, and symptom expression of proliferation diseased apple trees and decline diseased pear trees over a period of several years. Z Pflanzenkr Pflanzenschutz. 91:525–532.
  • Seemüller E, Schaper U, Zimbelmann F. 1984b. Seasonal variation in the colonization patterns of mycoplasmalike organisms associated with apple proliferation and pear decline. Z Pflanzenkr Pflanzenschutz. 91:371–382.
  • SIAP-SAGARPA, Secretaría de Agricultura, Ganadería, Desarrollo Rural, Pesca y Alimentación. 2014. Servicio de información Agroalimentaria y Pesquera. Available from: http://www.siap.gob.mx/cierre-de-la-produccion-agricola-por-estado/
  • Siddique ABM, Gurthrie JN, Walsh KB, White DT, Scott PT. 1998. Histopathology and within-plant distribution of the phytoplasma associated with Australian papaya dieback. Plant Dis. 82:1112–1120.
  • Sinclair WA, Griffiths HM, Davis RE, Lee IM. 1992. Detection of ash yellows mycoplasma like organisms in different tree organs and in chemically preserved specimens by DNA probe vs. DAPI. Plant Dis. 76:154–158.
  • Teixeira DC, Wulff NA, Martins EC, Kitajima EW, Bassanezi R, Ayres AJ, Eveillard S, Saillard C, Bové JM. 2008. A phytoplasma closely related to the pigeon pea witches’-broom phytoplasma (16SrIX) is associated with citrus huanglongbing symptoms in the estate of São Paulo, Brazil. Phytopathology. 98:977–984.
  • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673–4680.
  • Torres E, Bertolini E, Cambra M, Montón C, Martín MP. 2005. Real time PCR for simultaneous and quantitative detection of quarantine phytoplasmas from apple proliferation (16SrX) group. Mol Cell Probes. 19:334–340.
  • Wang K, Hiruki C. 2001. Molecular characterization and classification of phytoplasmas associated with canola yellowsand a new phytoplasma strain associated with dandelions. Plant Dis. 85:76–79.
  • Wei W, Kakizawa S, Suzuki S, Jung HY, Nishigawa H, Miyata S, Oshima K, Ugaki M, Hibi T, Namba S. 2004. In planta dynamic analysis of onion yellows phytoplasma using localized inoculation by insect transmission. Phytopathology. 94:244–250.
  • Wulff NA, Teixeira DC, Martins EC, Toloy RS, Bianco LF, Colletti DAB, Kitajima EW, Bové JM. 2015. Sunn hemp, a major source-plant of the phytoplasma associated with huanglongbing symptoms of sweet orange in São Paulo State, Brazil. J Cit Pathol. Available from: iocv_journalcitruspathology_26956
  • Yue HN, Wu YF, Shi YZ, Wu KK, Li YR. 2008. First report of Paulownia witches’-broom phytoplasma in China. Plant Dis. 92:1134.
  • Yvon M, Thébaud G, Alary R, Labonne G. 2009. Specific detection and quantification of the phytopathogenic agent ‘Candidatus Phytoplasma prunorum’. Mol Cell Probe. 23:227–234.
  • Zhang YP, Uyemoto JK, Kirkpatrick BC. 1998. A small-scale procedure for extracting nucleic acids from woody plants infected with various phytopathogens for PCR assay. J Virol Meth. 71:45–50.

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