Screening of pathogenicity-deficient Fusarium oxysporum mutants established by Agrobacterium tumefaciens-mediated transformation

References

• Abuodeh RO, Orbach MJ, Mandel MA, Das A, Galgiani JN. 2000. Genetic transformation of Coccidioides immitis facilitated by Agrobacterium tumefaciens. J Infect Dis. 181(6):2106–2110. doi:10.1086/jid.2000.181.issue-6.
   PubMed Web of Science ®Google Scholar
• Akashi H, Matsumoto S, Taira K. 2005. Gene discovery by ribozyme and siRNA libraries. Nat Rev Mol Cell Bio. 6(5):413–422. doi:10.1038/nrm1646.
   PubMed Web of Science ®Google Scholar
• Amaradasa BS, Beckham K, Dufault N, Sanchez T, Ertek TS, Iriarte F, Paret M, Ji P. 2018. First report of Fusarium oxysporum f. sp. niveum race 3 causing wilt of watermelon in Florida, USA. Plant Dis. 102(5):1029. doi:10.1094/PDIS-10-17-1649-PDN.
   Web of Science ®Google Scholar
• Betts MF, Tucker SL, Galadima N, Meng Y, Patel G, Li L, Donofrio N, Floyd A, Nolin S, Brown D, et al. 2007. Development of a high throughput transformation system for insertional mutagenesis in Magnaporthe oryzae. Fungal Genet Biol. 44(10):1035–1049. doi:10.1016/j.fgb.2007.05.001.
   PubMed Web of Science ®Google Scholar
• Bundock P, Dulk-Ras AD, Beijersbergen A, Hooykaas PJ. 1995. Trans-kingdom T-DNA transfer from Agrobacterium tumefaciens to saccharomyces cerevisiae. Embo J. 14(13):3206–3214. doi:10.1002/embj.1995.14.issue-13.
   PubMed Web of Science ®Google Scholar
• Caputo F, Nicoletti F, Picione FDL, Manici LM. 2015. Rhizospheric changes of fungal and bacterial communities in relation to soil health of multi-generation apple orchards. Biol Control. 88:8–17. doi:10.1016/j.biocontrol.2015.04.019.
   Web of Science ®Google Scholar
• Choi IY, JU-Hee JH, Lee WH, Park JH, Shin HD. 2015. First report on fusarium wilt of zucchini caused by Fusarium oxysporum, in Korea. Mycobiology. 43(2):174–178. doi:10.5941/MYCO.2015.43.2.174.
   PubMed Web of Science ®Google Scholar
• Choi J, Park J, Jeon J, Chi MH, Goh J, Yoo SY, Park J, Jung K, Kim H, Park SY, et al. 2007. Genome-wide analysis of T-DNA integration into the chromosomes of Magnaporthe oryzae. Mol Microniol. 66(2):371–382. doi:10.1111/mmi.2007.66.issue-2.
   PubMed Web of Science ®Google Scholar
• Clemons KV, Miller TK, Selitrennikoff CP, Stevens DA. 2002. fos-1, a putative histidine kinase as a virulence factor for systemic aspergillosis. Med Mycol. 40(3):259–262. doi:10.1080/mmy.40.3.259.262.
   PubMed Web of Science ®Google Scholar
• Damodaran T, Mishra VK, Jha SK, Gopal R, Rajan S, Ahmed I. 2019. First report of fusarium wilt in banana caused by Fusarium oxysporum f. sp. cubense tropical race 4 in India. Plant Dis. 103(5):1022–1023. doi:10.1094/PDIS-07-18-1263-PDN.
   Web of Science ®Google Scholar
• De Groot MJA, Bundock P, Hooykaas PJJ, Beijersbergen AGM. 1998. Agrobacterium tumefaciens-mediated transformation of filamentous fungi. Nat Biotechnol. 16(9):839–842. doi:10.1038/nbt0998-839.
   PubMed Web of Science ®Google Scholar
• Dunn-Coleman N, Wang H. 1998. Research news - Agrobacterium T-DNA: A silver bullet for filamentous fungi? Nat Biotechnol. 16(9):817–818. doi:10.1038/nbt0998-817.
   PubMed Web of Science ®Google Scholar
• Frandsen RJN. 2011. A guide to binary vectors and strategies for targeted genome modification in fungi using Agrobacterium tumefaciens-mediated transformation. J Microbiol Meth. 87(3):247–262. doi:10.1016/j.mimet.2011.09.004.
   PubMed Web of Science ®Google Scholar
• Franke-Whittle IH, Manici LM, Insam H, Stres B. 2015. Rhizosphere bacteria and fungi associated with plant growth in soils of three replanted apple orchards. Plant Soil. 395(1–2):317–333. doi:10.1007/s11104-015-2562-x.
   Web of Science ®Google Scholar
• Garibaldi A, Bertetti D, Pensa P, Ortu G, Gullino ML. 2015. First report of fusarium oxysporum causing Wilt on Allard’s Lavender (Lavandula × allardii) in Italy. Plant Dis. 99(12):1868. doi:10.1094/PDIS-02-15-0234-PDN.
   Web of Science ®Google Scholar
• Geng Z, Zhu W, Su H, Zhao Y, Zhang KQ, Yang J. 2014. Recent advances in genes involved in secondary metabolite synthesis, hyphal development, energy metabolism and pathogenicity in Fusarium graminearum (teleomorph Gibberella zeae). Biotechnol Adv. 32(2):390–402. doi:10.1016/j.biotechadv.2013.12.007.
   PubMed Web of Science ®Google Scholar
• Gilardi G, Franco-Ortega S, Gullino ML, Garibaldi A. 2019. First report of fusarium wilt of coriander (Coriandrum sativum) caused by Fusarium oxysporum in Italy. Plant Dis. 103:1021.
   Web of Science ®Google Scholar
• Hallen HE, Watling R, Adams GC. 2003. Taxonomy and toxicity of conocybe lactea and related species. Mycol Res. 107(8):969–979. doi:10.1017/S0953756203008190.
   PubMed Web of Science ®Google Scholar
• Halpern HC, Bell AA, Wagner TA, Liu J, Nichols RL, Olvey J, Woodward JE, Sanogo S, Jones CA, Chan CT, et al. 2018. First report of fusarium wilt of cotton caused by Fusarium oxysporum f. sp. vasitzfectum race 4 in Texas, USA. Plant Dis. 102(2):446. doi:10.1094/PDIS-07-17-1084-PDN.
   Web of Science ®Google Scholar
• He CP, Wang KD, Liao QH, Zheng FC. 2007. Spotting the positions of T-DNA on the genome for Magnaporthe grisea transformants and study on the mode of T-DNA ibsertion. Acta Microbiologica Sinica. 4:588–592.
   Google Scholar
• Hu Y, Dai Q, Liu Y, Yang Z, Song N, Gao X, Voegele RT, Kang Z, Huang L. 2014. Agrobacterium tumefaciens-mediated transformation of the causative agent of valsa canker of apple tree valsa mali var.mali. Curr Microbiol. 68(6):769–776. doi:10.1007/s00284-014-0541-8.
   PubMed Web of Science ®Google Scholar
• Islam MN, Nizam S, Verma PK. 2012. A highly efficient Agrobacterium mediated transformation system for chickpea wilt pathogen Fusarium oxysporum f. sp ciceri using DsRed-Express to follow root colonisation. Microbiol Res. 167(6):332–338. doi:10.1016/j.micres.2012.02.001.
   PubMed Web of Science ®Google Scholar
• Jiang D, Zhu W, Wang Y, Sun C, Zhang KQ, Yang J. 2013. Molecular tools for functional genomics in filamentous fungi: recent advances and new strategies. Biotechnol Adv. 31(8):1562–1574. doi:10.1016/j.biotechadv.2013.08.005.
   PubMed Web of Science ®Google Scholar
• Jurado M, Marin P, Callejas C, Moretti A, Vázquez C, González-Jaén MT. 2010. Genetic variability and fumonisin production by Fusarium proliferatum. Food Microbiol. 27(1):50–57. doi:10.1016/j.fm.2009.08.001.
   PubMed Web of Science ®Google Scholar
• Kemppainen M, Circosta A, Tagu D, Martin F, Pardo AG. 2005. Agrobacterium-mediated transformation of the ectomycorrhizal symbiont Laccaria bicolor S238N. Mycorrhiza. 16(1):19–22. doi:10.1007/s00572-005-0008-7.
   Google Scholar
• Liu T, Liu L, Jiang X, Hou J, Fu K, Zhou F, Chen J. 2010. Agrobacterium-mediated transformation as a useful tool for the molecular genetic study of the phytopathogen Curvularia lunata. Eur J Plant Pathol. 126(3):363–371. doi:10.1007/s10658-009-9541-0.
   Web of Science ®Google Scholar
• Lu S, Lyngholm L, Yang G, Bronson C, Yoder OC, Turgeon BG. 1994. Tagged mutations at the tox1 locus of cochliobolus heterostrophus by restriction enzyme-mediated integration. Proc Natl Acad Sci U S A. 91(26):12649–12653. doi:10.1073/pnas.91.26.12649.
   PubMed Web of Science ®Google Scholar
• Lu Y, Xiao S, Wang F, Sun J, Zhao L, Yan L, Xue C. 2017. Agrobacterium tumefaciens-mediated transformation as an efficient tool for insertional mutagenesis of Cercospora zeae-maydis. J Microbiol Met. 133:8–13. doi:10.1016/j.mimet.2016.12.010.
   PubMed Web of Science ®Google Scholar
• Manici LM, Caputo F, Saccà ML. 2017. Secondary metabolites released into the rhizosphere by Fusarium oxysporum and Fusarium spp. as underestimated component of non specific replant disease. Plant Soil. 415(1–2):85–98. doi:10.1007/s11104-016-3152-2.
   Web of Science ®Google Scholar
• Manici LM, Kelderer M, Franke-Whittle IH, Rühmer T, Baab G, Nicoletti F, Caputo F, Topp A, Insam H, Naef A. 2013. Relationship between root-endophytic microbial communities and replant disease in specialized apple growing areas in Europe. Appl Soil Eco. 72:207–214. doi:10.1016/j.apsoil.2013.07.011.
   Web of Science ®Google Scholar
• Martinez R, Aguilar MI, Guirado ML, Alvarez A, Gomez J. 2003. First report of fusarium wilt of cucumber caused by Fusarium oxysporum in Spain. Plant Pathol. 52(3):410. doi:10.1046/j.1365-3059.2003.00832.x.
   Web of Science ®Google Scholar
• Mazzola M. 1998. Elucidation of the microbial complex having a causal role in the development of apple replant disease in Washington. Phytopathology. 88(9):930–938. doi:10.1094/PHYTO.1998.88.9.930.
   PubMed Web of Science ®Google Scholar
• Mazzola M, Hewavitharana SS, Strauss SL. 2015. Brassica seed meal soil amendments transform the rhizosphere microbiome and improve apple production through resistance to pathogen re-infestation. Phytopathology. 105(4):460–469. doi:10.1094/PHYTO-09-14-0247-R.
   PubMed Web of Science ®Google Scholar
• Meyer V, Mueller D, Strowig T, Stahl U. 2003. Comparison of different transformation methods for Aspergillus giganteus. Curr Genet. 43(5):371–377. doi:10.1007/s00294-003-0406-3.
   PubMed Web of Science ®Google Scholar
• Michielse CB, Ram AFG, Hooykaas PJJ, Hondel CAMJJVD. 2004. Role of bacterial virulence proteins in Agrobacterium-mediated transformation of Aspergillus awamori. Fungal Genet Biol. 41(5):571–578. doi:10.1016/j.fgb.2004.01.004.
   PubMed Web of Science ®Google Scholar
• Mullins ED, Chen X, Romaine P, Raina R, Geiser DM, Kang S. 2001. Agrobacterium-mediated transformation of Fusarium oxysporum: an efficient tool for insertional mutagenesis and gene transfer. Phytopathology. 91(2):173–180. doi:10.1094/PHYTO.2001.91.2.173.
   PubMed Web of Science ®Google Scholar
• Palmero D, Rubio-Moraga A, Galvez-Patón L, Nogueras J, Abato C, Gómez-Gómez L, Ahrazem O. 2014. Pathogenicity and genetic diversity of Fusarium oxysporum isolates from corms of Crocus sativus. Ind Corp Prod. 61:186–192. doi:10.1016/j.indcrop.2014.06.051.
   Web of Science ®Google Scholar
• Phoulivong S, Cai L, Chen H, McKenzie EHC, Abdelsalam K, Chukeatirote E, Hyde KD. 2010. Colletotrichum gloeosporioides is not a common pathogen on tropical fruits. Fungal Divers. 44(1):33–43. doi:10.1007/s13225-010-0046-0.
   Web of Science ®Google Scholar
• Rogers CW, Challen MP, Green JR, Whipps JM. 2004. Use of REMI and Agrobacterium -mediated transformation to identify pathogenicity mutants of the biocontrol fungus, coniothyrium minitans. FEMS Microbiol Lett. 241(2):207–214. doi:10.1016/j.femsle.2004.10.022.
   PubMed Web of Science ®Google Scholar
• Sabina B, Barbara P, Neja Z, Metka N, Nada K, Samo T, Branka K, Ljerka L, Erika S, Jure S, et al. 2012. Virtual screening yields inhibitors of novel antifungal drug target, benzoate 4 monooxygenase. J Chem Inf Model. 52(11):3053–3063. doi:10.1021/ci3004418.
   PubMed Web of Science ®Google Scholar
• Schuster A, Tisch D, Seidl-Seiboth V, Kubicek CP, Schmoll M. 2012. Roles of protein kinase A and adenylate cyclase in light modulated cellulase regulation in Trichoderma reesei. Appl Environ Microbiol. 78(7):2168–2178. doi:10.1128/AEM.06959-11.
   PubMed Web of Science ®Google Scholar
• Singh J, Silva KJP, Fuchs M, Khan A. 2019. Potential role of weather, soil and plant microbial communities in rapid decline of apple trees. PLoS One. 14(3):e0213293. doi:10.1371/journal.pone.0213293.
   PubMed Web of Science ®Google Scholar
• Sørensen LQ, Lysøe E, Larsen JE, Khorsand-Jamal P, Nielsen KF, Frandsen RJN. 2014. Genetic transformation of Fusarium avenaceum by Agrobacterium tumefaciens mediated transformation and the development of a USER-brick vector construction system. BMC Mol Biol. 6(1):15. doi:10.1186/1471-2199-15-15.
   Web of Science ®Google Scholar
• Spath M, Insam H, Peintner U, Kelderer M, Kuhnert R, Franke-Whittle IH. 2015. Linking soil biotic and abiotic factors to apple replant disease: a greenhouse approach. J Phytopathol. 163(4):287–299. doi:10.1111/jph.2015.163.issue-4.
   Web of Science ®Google Scholar
• Sung HC, Min SK, Yun SK, Jung YL. 2001. A rapid radicle assay for prescreening antagonistic bacteria against Phytophthora capsici on pepper. Mycobiology. 29(4):218–223. doi:10.1080/12298093.2001.12015791.
   Google Scholar
• Takahara H, Tsuji G, Kubo Y, Yamamoto M, Toyoda K, Inagaki Y, Ichinose Y, Shiraishi T. 2004. Agrobacterium tumefaciens-mediated transformation as a tool for random mutagenesis of Colletotrichum trifolii. J Gen Plant Pathol. 70(2):93–96. doi:10.1007/s10327-003-0099-y.
   Google Scholar
• Tewoldemedhin YT, Mazzola M, Labuschagne I, Mcleod A. 2011. A multi-phasic approach reveals that apple replant disease is caused by multiple biological agents, with some agents acting synergistically. Soil Biol Biochem. 43(9):1917–1927. doi:10.1016/j.soilbio.2011.05.014.
   Web of Science ®Google Scholar
• Van Schoor L, Denman S, Cook NC. 2009. Characterisation of apple replant disease under South African conditions and potential biological management strategies. Sci Hortic-amsterdam. 119(2):153–162. doi:10.1016/j.scienta.2008.07.032.
   Web of Science ®Google Scholar
• Wang M-J, Li P, Wu M, Fan YS, Gu SQ, Dong JG. 2012. Constuction and evaluation of ATMT mutant library of Setosphaeria turcica. Scientia Agricultura Sinica. 45:2384–2392.
   Google Scholar
• Yim B, Smalla K, Winkelmann T. 2013. Evaluation of apple replant problems based on different soil disinfection treatments-links to soil microbial community structure? Plant Soil. 366(1–2):617–631. doi:10.1007/s11104-012-1454-6.
   Web of Science ®Google Scholar
• Yun YZ, Zhou X, Yang S, Wen Y, You HX, Zheng YR, Norvienyeku J, Shim WB, Wang ZH. 2019. Fusarium oxysporum f. sp. lycopersici C2H2 transcription factor FolCzf1 is required for conidiation, fusaric acid production, and early host infection. Curr Gent. 65(3):773–783. doi:10.1007/s00294-019-00931-9.
   PubMed Web of Science ®Google Scholar
• Zou QJ, Wang ST, Liang KJ, Wang YN, Hu TL, Han ZQ, Cao KQ. 2014. Suspected pathogenic Fusarium spp. isolated from apple orchard soils in Hebei Province. Mycosystema. 5:976–983.
   Google Scholar