722
Views
73
CrossRef citations to date
0
Altmetric
Original Articles

Molecular Biology, Biotechnology and Genomics of Flooding-Associated Low O2 Stress Response in Plants

&
Pages 1-21 | Published online: 18 Jan 2007

REFERENCES

  • Agarwal , S. and Grover , A. 2005 . Isolation and Transcription Profiling of low O2 Stress Associated cDNA Clones from Flooding Stress Tolerant FR13A Rice Genotype . Annals of Botany , 96 : 831 – 844 . [PUBMED] [INFOTRIEVE] [CSA]
  • Albrecht , G. and Mustroph , A. 2003 . Localization of sucrose synthase in wheat roots: Increased in situ activity of sucrose synthase correlates with cell wall thickening by cellulose deposition under hypoxia . Planta , 217 ( 2 ) : 252 – 260 . [PUBMED] [INFOTRIEVE] [CSA]
  • Albrecht , G. , Mustroph , A. and Fox , T. C. 2004 . Sugar and fructan accumulation during metabolic adjustment between respiration and fermentation under low oxygen conditions in wheat roots . Physiol. Plant. , 120 ( 1 ) : 93 – 105 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Allegre , A. , Silvestre , J. , Morard , P. , Kallerhoff , J. and Pinelli , E. 2004 . Nitrate reductase regulation in tomato roots by exogenous nitrate: A possible role in tolerance to long-term root anoxia . J. Exp. Bot. , 55 ( 408 ) : 2625 – 2634 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Andrews , D. L. , Drew , M. C. , Johnson , J. R. and Cobb , B. G. 1994a . The Response of Maize Seedlings of Different Ages to Hypoxic and Anoxic Stress (Changes in Induction of Adh1 mRNA, Adh Activity, and Survival of Anoxia) . Plant Physiol. , 105 ( 1 ) : 53 – 60 . [PUBMED] [INFOTRIEVE] [CSA]
  • Andrews , D. L. , MacAlpine , D. M. , Johnson , J. R. , Kelley , P. M. , Cobb , B. G. and Drew , M. C. 1994b . Differential induction of mRNAs for the glycolytic and ethanolic fermentative pathways by hypoxia and anoxia in maize seedlings . Plant Physiol. , 106 : 1575 – 1582 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Armstrong , W. 1979 . Aeration in higher plants . Adv. Bot. Res. , 7 : 225 – 232 . [CSA]
  • Arpagaus , S. and Braendle , R. 2000 . The significance of alpha-amylase under anoxia stress in tolerant rhizomes (Acorus calamus L.) and non-tolerant tubers (Solanum tuberosum) . J. Exp. Bot. , 51 ( 349 ) : 1475 – 1477 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Arumugam Pillai , M. , Lihuang , Z. and Akiyama , T. 2002 . Molecular cloning, characterization, expression and chromosomal location of OsGAPDH, a submergence responsive gene in rice (Oryza sativa L.) . Theor. Appl. Genet. , 105 ( 1 ) : 34 – 42 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Atwell , B. J. , Waters , I. and Greenway , H. 1982 . The effect of oxygen and turbulence on elongation of coleoptiles of submergence -tolerant and -intolerant rice cultivars . J. Exp. Bot. , 33 : 1030 – 1044 . [CSA]
  • Bailey-Serres , J. 1999 . Selective translation of cytoplasmic mRNAs in plants . Trends Plant Sci. , 4 ( 4 ) : 142 – 148 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Bailey-Serres , J. and Dawe , R. K. 1996 . Both 5′ and 3′ sequences of maize adh1 mRNA are required for enhanced translation under low-oxygen conditions . Plant Physiol. , 112 ( 2 ) : 685 – 695 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Bailey-Serres , J. and Freeling , M. 1990 . Hypoxic stress-induced changes in ribosomes of maize seedling roots . Plant Physiol. , 94 : 1237 – 1243 . [CSA]
  • Baxter-Burrell , A. , Chang , R. , Springer , P. and Bailey-Serres , J. 2003 . Gene and enhancer trap transposable elements reveal oxygen deprivation-related genes and their complex patterns of expression in Arabidopsis . Ann. Bot. , 91 : 129 – 141 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Baxter-Burrell , A. , Yang , Z. , Springer , P. S. and Bailey-Serres , J. 2002 . RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance . Science , 296 ( 5575 ) : 2026 – 2028 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Biemelt , S. , Hajirezaei , M. R. , Melzer , M. , Albrecht , G. and Sonnewald , U. 1999 . Sucrose synthase activity does not restrict glycolysis in roots of transgenic potato plants under hypoxic conditions . Planta , 210 ( 1 ) : 41 – 49 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Botrel , A. and Kaiser , W. M. 1997 . Nitrate reductase activation state in barley roots in relation to the energy and carbohydrate status . Planta , 201 ( 4 ) : 496 – 501 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Breviario , D. , Giani , S. , Morello , L. and Coraggio , I. 1994 . Anaerobiosis-mediated early transcriptional and translational responses in rice (Oryza sativa L.) coleoptiles and roots . Plant Cell Environ. , 17 : 925 – 934 . [CSA]
  • Brzezinski , R. , Talbot , B. G. , Brown , D. , Klimuszko , D. , Blakeley , S. D. and Thirion , J. P. 1986 . Characterization of alcohol dehydrogenase in young soybean seedlings . Biochem. Genet. , 24 ( 9–10 ) : 643 – 656 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Bucher , M. , Brander , K. A. , Sbicego , S. , Mandel , T. and Kuhlemeier , C. 1995 . Aerobic fermentation in tobacco pollen . Plant Mol. Biol. , 28 : 739 – 750 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Bucher , M. , Brandle , R. and Kuhlemeier , C. 1994 . Ethanolic fermentation in transgenic tobacco expressing Zymomonas mobilis pyruvate decarboxylase . EMBO J. , 13 ( 12 ) : 2755 – 2763 . [PUBMED] [INFOTRIEVE] [CSA]
  • Bucher , M. and Kuhlemeier , C. 1993 . Long-term anoxia tolerance. Multi-level regulation of gene expression in the amphibious plant Acorus calamus L . Plant Physiol. , 103 ( 2 ) : 441 – 448 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Bunn , H. F. and Poyton , R. O. 1996 . Oxygen sensing and molecular adaptation to hypoxia . Physiological Reviews , 76 : 839 – 885 . [PUBMED] [INFOTRIEVE] [CSA]
  • Carystinos , G. D. , MacDonald , H. R. , Monroy , A. F. , Dhindsa , R. S. and Poole , R. J. 1995 . Vacuolar H(+)-translocating pyrophosphatase is induced by anoxia or chilling in seedlings of rice . Plant Physiol. , 108 ( 2 ) : 641 – 649 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Caturla , M. , Chaparro , C. , Schroeyers , K. and Holsters , M. 2002 . Suppression subtractive hybridization to enrich low-abundance and submergence enhanced transcripts of adventitious root primodia of Sesbania rostrata . Plant Sci. , 162 : 915 – 921 . [CROSSREF] [CSA]
  • Chang , W. W. P. , Huang , L. , Shen , M. , Webster , C. , Burlingame , A. L. and Roberts , J. K. M. 2000 . Patterns of protein synthesis and tolerance of anoxia in root tips of maize seedlings acclimated to a low-oxygen environment and identification of proteins by mass spectrometry . Plant Physiol. , 122 : 295 – 318 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Chen , Y. , Shi , G. , Xia , W. , Kong , C. , Zhao , S. , Gaw , A. F. , Chen , E. Y. , Yang , G. P. , Giaccia , A. J. , Le , Q. T. and Koong , A. C. 2004 . Identification of hypoxia-regulated proteins in head and neck cancer by proteomic and tissue array profiling . Cancer Res. , 64 ( 20 ) : 7302 – 7310 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Cheong , Y. H. , Chang , H. S. , Gupta , R. , Wang , X. , Zhu , T. and Luan , S. 2002 . Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis . Plant Physiol. , 129 ( 2 ) : 661 – 677 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Cho , H. T. and Kende , H. 1997 . Expression of expansin genes is correlated with growth in deepwater rice . The Plant Cell , 9 ( 9 ) : 1661 – 1671 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Conley , T. R. , Peng , H. P. and Shih , M. C. 1999 . Mutations affecting induction of glycolytic and fermentative genes during germination and environmental stresses in Arabidopsis . Plant Physiol. , 119 : 599 – 607 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Das , A. and Uchimiya , H. 2002 . Oxygen stress and adaptation of a semi- aquatic plant: Rice (Oryza sativa) . J. Plant Res. , 115 : 315 – 320 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Das , K. K. , Sarkar , R. K. and Ismail , A. M. 2004 . Elongation ability and non-structural carbohydrate levels in relation to submergence tolerance in rice . Plant Sci , 168 : 131 – 136 . [CROSSREF] [CSA]
  • Dat , J. F. , Capelli , N. , Folzer , H. , Bourgeade , P. and Badot , P. M. 2004 . Sensing and signaling during plant flooding . Plant Physiol. Biochem. , 42 : 273 – 282 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dejardin , A. , Sokolov , L. N. and Kleczkowski , L. A. 1999 . Sugar/osmoticum levels modulate differential abscisic acid-independent expression of two stress-responsive sucrose synthase genes in Arabidopsis . Biochem J. , 344 : 503 – 509 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dennis , E. S. , Dolferus , R. , Ellis , M. , Rahman , M. , Wu , Y. , Hoeren , F. U. , Grover , A. , Ismond , K. P. , Good , A. G. and Peacock , W. J. 2000 . Molecular strategies for improving waterlogging tolerance in plants . J. Exp. Bot. , 51 : 89 – 97 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dennis , E. S. , Gerlach , W. L. , Pryor , A. J. , Bennetzen , J. L. , Inglis , A. , Llewellyn , D. , Sachs , M. M. , Ferl , R. J. and Peacock , W. J. 1984 . Molecular analysis of the alcohol dehydrogenase (Adh1) gene of maize . Nucleic Acids Res. , 12 : 3983 – 4000 . [PUBMED] [INFOTRIEVE] [CSA]
  • Dennis , E. S. , Sachs , M. M. , Gerlach , W. L. , Finnegan , E. J. and Peacock , W. J. 1985 . Molecular analysis of the alcohol dehydrogenase 2 (Adh2) gene of maize . Nucleic Acids Res. , 13 : 727 – 743 . [PUBMED] [INFOTRIEVE] [CSA]
  • Diatchenko , L. , Lau , Y. F. , Campbell , A. P. , Chenchik , A. , Moqadam , F. , Huang , B. , Lukyanov , S. , Lukyanov , K. , Gurskaya , N. , Sverdlov , E. D. and Siebert , P. D. 1996 . Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries . Proc. Natl. Acad. Sci. USA , 93 ( 12 ) : 6025 – 6030 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dolferus , R. , Jacobs , M. , Peacock , W. J. and Dennis , E. S. 1994 . Differential interactions of promoter elements in stress responses of the Arabidopsis Adh gene . Plant Physiol. , 105 : 1075 – 1087 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dolferus , R. , Marbaix , G. and Jacobs , M. 1985 . Alcohol dehydrogenase in Arabidopsis: Analysis of the induction phenomenon in plants and tissue cultures . Mol. Gen. Genet. , 199 : 256 – 264 . [CROSSREF] [CSA]
  • Dordas , C. , Hasinoff , B. B. , Igamberdiev , A. U. , Manac'h , N. , Rivoal , J. and Hill , R. D. 2003 . Expression of a stress-induced hemoglobin affects NO levels produced by alfalfa root cultures under hypoxic stress . Plant J. , 35 ( 6 ) : 763 – 770 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dordas , C. , Hasinoff , B. B. , Rivoal , J. and Hill , R. D. 2004 . Class-1 hemoglobins, nitrate and NO levels in anoxic maize cell-suspension cultures . Planta , 219 ( 1 ) : 66 – 72 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Drew , M. C. 1997 . Oxygen deficiency and root metabolism: Injury and acclimation under hypoxia and anoxia . Annu. Rev. Plant Physiol. Plant Mol. Biol. , 48 : 223 – 250 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Dubey , H. and Grover , A. 2001 . Current initiatives in proteomics research: The Plant Perspective . Current Sci. , 80 ( 2 ) : 262 – 269 . [CSA]
  • Dubey , H. and Grover , A. 2003 . Respiratory pathway enzymes are differentially altered in flood tolerant and sensitive rice types during O2 deprivation stress and post-stress recovery phase . Plant Sci. , 164 : 815 – 821 . [CROSSREF] [CSA]
  • Ella , E. , Kawano , N. , Yamauchi , Y. , Tanaka , K. and Ismail , A. 2003 . Blocking ethylene perception enhances flooding tolerance in rice . Funct. Plant Biol. , 30 : 813 – 819 . [CSA]
  • Ellis , M. H. , Millar , A. A. , Llewellyn , D. J. , Peacock , W. J. and Dennis , E. S. 2003 . Transgenic cotton (Gossypium hirsutum) over-expressing alcohol dehydrogenase shows increased ethanol fermentation but no increase in tolerance to oxygen deficiency . Australian J. Plant Physiol. , 27 ( 11 ) : 1041 – 1050 . [CSA]
  • Fan , T. W.-M. , Higashi , R. M. , Frenkiel , T. A. and Lane , A. N. 1997 . Anaerobic nitrate and ammonium in flood-tolerant rice coleoptiles . J. Exp. Bot. , 48 : 1655 – 1666 . [CROSSREF] [CSA]
  • Fennoy , S. L. and Bailey-Serres , J. 1995 . Post-translational regulation of gene expression in oxygen-deprived roots of maize . Plant J. , 7 : 287 – 295 . [CROSSREF] [CSA]
  • Fennoy , S. L. , Nong , T. and Bailey-Serres , J. 1998 . Transcriptional and post-translational processes regulate gene expression in oxygen-deprived roots of maize . Plant J. , 15 : 727 – 735 . [CROSSREF] [CSA]
  • Fizames , C. , Munos , S. , Cazettes , C. , Nacry , P. , Boucherez , J. , Gaymard , F. , Piquemal , D. , Delorme , V. , Commes , T. , Doumas , P. , Cooke , R. , Marti , J. , Sentenac , H. and Gojon , A. 2004 . The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence . Plant Physiol. , 134 ( 1 ) : 67 – 80 . [PUBMED] [INFOTRIEVE] [CSA]
  • Folzer , H. , Capelli , N. , Dat , J. and Badot , P. M. 2005 . Molecular cloning and characterization of calmodulin genes in young oak seedlings (Quercus petraea L.) during early flooding stress . Biochim. Biophys. Acta , 1727 ( 3 ) : 213 – 219 . [PUBMED] [INFOTRIEVE] [CSA]
  • Fox , T. C. , Mujer , C. V. , Andrews , D. L. , Williams , A. S. , Cobb , B. G. , Kennedy , R. A. and Rumpho , M. E. 1995 . Identification and gene expression of anaerobically induced enolase in Echinochloa phyllopogon and Echinochloa crus-pavonis . Plant Physiol. , 109 ( 2 ) : 433 – 443 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Fukao , T. and Bailey-Serres , J. 2004 . Plant responses to hypoxia – is survival a balancing act? . Trends Plant Sci. , 9 ( 9 ) : 449 – 456 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Fukao , T. , Kennedy , R. A. , Yamasue , Y. and Rumpho , M. E. 2003 . Genetic and biochemical analysis of anaerobically-induced enzymes during seed germination of Echinochloa crus-galli varieties tolerant and intolerant of anoxia . J. Exp. Bot. , 54 ( 386 ) : 1421 – 1429 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Gao , P. , Wang , G. Y. , Zhao , H. J. , Fan , L. and Tao , Y. Z. 2003 . Isolation and identification of submergence-induced genes in maize seedling by suppression subtractive hybridization . Acta Botanica Sinica , 45 ( 4 ) : 479 – 483 . [CSA]
  • Garcia-Novo , F. and Crawford , R. M. M. 1973 . Soil aeration, nitrate reduction and flooding tolerance in higher plants . New Phytol. , 72 : 1031 – 1039 . [CSA]
  • Geigenberger , P. 2003 . Response of plant metabolism to too little oxygen . Curr. Opin. Plant Biol. , 6 ( 3 ) : 247 – 256 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Geigenberger , P. , Fernie , A. R. , Gibon , Y. , Christ , M. and Stitt , M. 2000 . Metabolic activity decreases as an adaptive response to low internal oxygen in growing potato tubers . Biol. Chem. , 381 ( 8 ) : 723 – 740 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Gerlach , W. L. , Pryor , A. J. , Dennis , E. S. , Ferl , R. J. , Sachs , M. M. and Peacock , W. J. 1982 . cDNA cloning and induction of the alcohol dehydrogenase gene (Adh1) of maize . Proc. Nat. Acad. Sci. USA , 79 : 2981 – 2985 . [CSA]
  • Germain , V. , Raymond , P. and Ricard , B. 1997 . Differential expression of two tomato lactate dehydrogenase genes in response to oxygen deficit . Plant Mol. Biol. , 35 ( 6 ) : 711 – 721 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Gibbs , J. , Morrell , S. , Valdez , A. , Setter , T. L. and Greenway , H. 2000 . Regulation of alcoholic fermentation in coleoptiles of two rice cultivars differing in tolerance to anoxia . J. Exp. Bot. , 51 ( 345 ) : 785 – 796 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Good , A. G. and Crosby , W. 1989a . Induction of alcohol dehydrogenase and lactate dehydrogenase in hypoxically induced barley . Plant Physiol. , 90 : 860 – 866 . [CSA]
  • Good , A. G. and Crosby , W. 1989b . Anaerobic induction of alanine aminotransferase in barley root tissue . Plant Physiol. , 90 : 1305 – 1309 . [CSA]
  • Good , A. G. and Muench , D. G. 1993 . Long-term anaerobic metabolism in root tissue . Plant Physiol. , 101 : 1163 – 1168 . [PUBMED] [INFOTRIEVE] [CSA]
  • Good , A. G. and Paetkau , D. H. 1992 . Identification and characterization of a hypoxically induced maize lactate dehydrogenase gene . Plant Mol. Biol. , 19 ( 4 ) : 693 – 697 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Gout , E. , Boisson , A. , Aubert , S. , Douce , R. and Bligny , R. 2001 . Origin of the cytoplasmic pH changes during anaerobic stress in higher plant cells. Carbon-13 and phosphorous-31 nuclear magnetic resonance studies . Plant Physiol. , 125 ( 2 ) : 912 – 925 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Gracey , A. Y. , Troll , J. V. and Somero , G. N. 2001 . Hypoxia-induced gene expression profiling in the eukaryotic fish Gillichthys mirabilis . Proc. Natl. Acad. Sci. USA , 98 ( 4 ) : 1993 – 1998 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Greenway , H. and Gibbs , J. 2003a . Mechanisms of anoxia tolerance in plants. I. Growth, survival and anaerobic catabolism . Funct. Plant Biol. , 30 ( 1 ) : 1 – 47 . [CROSSREF] [CSA]
  • Greenway , H. and Gibbs , J. 2003b . Mechanisms of anoxia tolerance in plants. II. Energy requirements for maintenance and energy distribution to essential processes . Funct. Plant Biol. , 30 ( 10 ) : 999 – 1036 . [CROSSREF] [CSA]
  • Greijer , A. E. and van der Wall , E. 2004 . The role of hypoxia inducible factor 1 (HIF-1) in hypoxia induced apoptosis . J. Clin. Pathol. , 57 ( 10 ) : 1009 – 1014 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Grichko , V. P. and Glick , B. R. 2001 . Flooding tolerance of transgenic tomato plants expressing the bacterial enzyme ACC deaminase controlled by the 35 S, rolD or PRB-1 b promoter . Plant Physiol. Biochem. , 39 : 19 – 25 . [CROSSREF] [CSA]
  • Guglielminetti , L. , Perata , P. and Alpi , A. 1995 . Effect of anoxia on carbohydrate metabolism in rice seedlings . Plant Physiol. , 108 : 735 – 741 . [PUBMED] [INFOTRIEVE] [CSA]
  • Hanson , A. D. , Jocobsen , J. V. and Zwar , J. A. 1984 . Regulated expression of three alcohol dehydrogenase genes in barley aleurone layers . Plant Physiol. , 75 : 573 – 575 . [CSA]
  • Hazen , S. P. , Wu , Y. and Kreps , J. A. 2003 . Gene expression profiling of plant responses to abiotic stress . Funct. Integr. Genomics , 3 : 105 – 111 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • He , C. , Finlayson , S. A. , Drew , M. C. , Jordan , W. R. and Morgan , P. W. 1996 . Ethylene Biosynthesis during Aerenchyma Formation in Roots of Maize Subjected to Mechanical Impedance and Hypoxia . Plant Physiol. , 112 ( 4 ) : 1679 – 1685 . [PUBMED] [INFOTRIEVE] [CSA]
  • Hill , R. D. 1998 . What are hemoglobins doing in plants? . Can. J. Bot. , 76 : 707 – 712 . [CROSSREF] [CSA]
  • HilleRisLambers , D. and Vergara , B. Summary results of an international collaboration on screening methods for flood tolerance . Proceedings of the 1981 International Deepwater Rice Workshop . pp. 347 – 353 . Los Baños, , Philippines : International Rice Research Institute .
  • Hochaehka , P. W. , Buck , L. T. , Doll , C. J. and Land , S. C. 1996 . Unifying theory of hypoxia tolerance: Molecular/metabolic and rescue mechanisms for surviving oxygen lack . Proc. Natl. Acad. Sci. USA , 93 : 9493 – 9498 . [CROSSREF] [CSA]
  • Hoeren , F. U. , Dolferus , R. , Wu , Y. , Peacock , W. J. and Dennis , E. S. 1998 . Evidence for a role for AtMYB2 in the Induction of the Arabidopsis Alcohol Dehydrogenase Gene (Adh1) Low Oxygen . Genetics , 149 : 479 – 490 . [PUBMED] [INFOTRIEVE] [CSA]
  • Hondred , D. and Hanson , A. D. 1990 . Hypoxically inducible barley lactate dehydrogenase: cDNA cloning and molecular analysis . Proc. Natl. Acad. Sci. USA , 87 ( 18 ) : 7300 – 7304 . [PUBMED] [INFOTRIEVE] [CSA]
  • Hossain , M. A. , Huq , E. and Hodges , T. K. 1994a . Sequence of a cDNA from Oryza sativa (L.) encoding the pyruvate decarboxylase 1 gene . Plant Physiol. , 106 : 799 – 800 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hossain , M. A. , Huq , E. , Grover , A. , Dennis , E. S. , Peacock , W. J. and Hodges , T. K. 1996a . Characterization of pyruvate decarboxylase genes from rice . Plant Mol. Biol. , 31 : 761 – 770 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hossain , M. A. , Huq , E. and Hodges , T. K. Genetic engineering of rice to develop flooding-tolerant high-yielding cultivars . Fifth Annual Meeting . pp. 53 – 54 . New Delhi, , India : National Rice Biotechnology Network .
  • Hossain , M. A. , McGee , J. D. , Grover , A. , Dennis , E. , Peacock , W. J. and Hodges , T. K. 1994b . Nucleotide sequence of a rice genomic pyruvate decarboxylase gene that lacks introns: A pseudo-gene? . Plant Physiol. , 106 : 1697 – 1698 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hsu , Y. M. , Tseng , M. J. and Lin , C. H. 1999 . The fluctuation of carbohydrates and nitrogen compounds in flooded wax-apple trees . Bot. Bull Acad. Sin , 40 : 193 – 198 . [CSA]
  • Huang , J. , Takano , T. and Akita , S. 2000 . Expression of alpha-expansin genes in young seedlings of rice (Oryza sativa L.) . Planta , 211 ( 4 ) : 467 – 473 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hunt , P. W. , Klok , E. J. , Trevaskis , B. , Watts , R. A. , Ellis , M. H. , Peacock , W. J. and Dennis , E. S. 2002 . Increased level of hemoglobin 1 enhances survival of hypoxic stress and promotes early growth in Arabidopsis thaliana . Proc. Natl. Acad. Sci. USA , 99 ( 26 ) : 17197 – 17202 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Hunt , P. W. , Watts , R. A. , Trevaskis , B. , Llewelyn , D. J. , Burnell , J. , Dennis , E. S. and Peacock , W. J. 2001 . Expression and evolution of functionally distinct haemoglobin genes in plants . Plant Mol. Biol. , 47 ( 5 ) : 677 – 692 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Huq , E. , Harrington , S. , Hossain , M. A. , Wen , F. , McCouch , S. R. and Hodges , T. K. 1999 . Molecular characterization of pdc2 and mapping of three pdc genes from rice . Theor. Appl. Gen. , 98 : 815 – 824 . [CROSSREF] [CSA]
  • Huq , E. and Hodges , T. K. 1999 . An anaerobically inducible early (aie) gene family from rice . Plant Mol. Biol. , 40 : 591 – 601 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Huq , E. , Hossain , M. A. and Hodges , T. K. 1995 . Cloning and sequencing of a cDNA encoding the pyruvate decarboxylase 2 gene (accession no. U27350 [GenBank]) from rice . Plant Physiol. , 109 : 722 [CSA]
  • Huq , E. , Hossain , M. A. , Harrington , S. , McCouch , S. R. and Hodges , T. K. Molecular characterization of the pdc2 gene and mapping of the three pdc genes from rice . General Meeting of the International Program on Rice Biotechnology . Malacca, Malaysia. pp. 182
  • Huynhle , N. , Vantoai , T. , Streeter , J. and Banowetz , G. 2005 . Regulation of flooding tolerance of SAG12: ipt Arabidopsis plants by cytokinin . J. Exp. Bot. , 56 ( 415 ) : 1397 – 1407 . [CROSSREF] [CSA]
  • Hwang , Y. S. , Thomas , B. R. and Rodriguez , R. L. 1999 . Differential expression of rice alpha-amylase genes during seedling development under anoxia . Plant Mol. Biol. , 40 ( 6 ) : 911 – 920 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Igamberdiev , A. U. and Hill , R. D. 2004 . Nitrate, NO and haemoglobin in plant adaptation to hypoxia: An alternative to classic fermentation pathways . J. Exp. Bot. , 55 : 2473 – 2483 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Ingram , J. and Bartels , D. 1996 . The molecular basis of dehydration tolerance in plants . Annu. Rev. Plant Physiol. Plant Mol. Biol. , 47 : 377 – 403 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • IRRI . 1996 . Rainfed Lowland Rice Ecosystem. RL-3 Germplasm Improvement , Manila, , Philippines : International Rice Research Institute .
  • Ismond , K. P. , Dolferus , R. , de Pauw , M. , Dennis , E. S. and Good , A. G. 2003 . Enhanced low oxygen survival in Arabidopsis through increased metabolic flux in the fermentative pathway . Plant Physiol. , 132 ( 3 ) : 1292 – 1302 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Jackson , M. B. 1989 . “ Regulation of Aerenchyma formation in roots and shoots by oxygen and ethylene ” . In Cell Separation in Plants. Physiology, Biochemistry and Molecular Biology , NATO ASI Series Edited by: Osborne , D. J. and Jackson , M. B. Vol. H35 , 263 – 274 . Berlin : Springer-Verlag .
  • Jackson , M. B. and Drew , M. C. 1984 . “ Effects of flooding on growth and metabolism of herbaceous plants ” . In Flooding and Plant Growth , Edited by: Kozlowski , T. T. 47 – 128 . New York : Academic Press Inc. .
  • Jackson , M. B. and Ram , P. C. 2003 . Physiological and molecular basis of susceptibility and tolerance of rice plants to complete submergence . Annals of Botany , 91 : 227 – 241 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Jackson , M. B. , Waters , I. , Setter , T. and Greenway , H. 1987 . Injury of rice plants caused by complete submergence; a contribution by ethylene (ethene) . J. Exp. Bot. , 38 : 1826 – 1838 . [CSA]
  • Johnson , J. R. , Cobb , B. G. and Drew , M. C. 1994 . Hypoxic induction of anoxia tolerance in roots of adh1 null Zea mays L . Plant Physiol. , 105 : 61 – 67 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Kadowaki , K. I. , Matsuoka , M. , Murai , N. and Harada , K. 1988 . Induction of two alcohol dehydrogenase polypeptides in rice roots during anaerobiosis . Plant Sci. , 54 : 29 – 36 . [CROSSREF] [CSA]
  • Kamolsukyunyong , W. , Ruanjaichon , V. , Siangliw , M. , Kawasaki , S. , Sasaki , T. , Vanavichit , A. and Tragoonrung , S. 2001 . Mapping of quantitative trait locus related to submergence tolerance in rice with aid of chromosome walking . DNA Res. , 8 ( 4 ) : 163 – 171 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Kato-Noguchi , H. 2004 . Sugar utilization and anoxia tolerance in rice roots acclimated by hypoxic pretreatment . J. Plant Physiol. , 161 ( 7 ) : 803 – 808 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Kawase , M. 1979 . Role of cellulose in aerenchyma development in sunflower . Am. J. Bot. , 66 : 183 – 190 . [CSA]
  • Kelley , P. M. , Godfrey , K. , Lal , S. K. and Alleman , M. 1991 . Characterization of the maize pyruvate decarboxylase gene . Plant Mol. Biol. , 17 : 1259 – 1261 . [PUBMED] [INFOTRIEVE] [CSA]
  • Khush , G. S. and Baenziger , P. S. Crop improvement: Emerging trends in rice and wheat . Proceedings of the 2nd International Crop Science Congress . Crop productivity and sustainability—shaping the future , Edited by: Chopra , V. L. , Singh , R. B. and Anupam , V. pp. 113 – 125 . New Delhi : Oxford and IBH Publishing Co. Pvt. Ltd. .
  • Klok , E. J. , Wilson , I. W. , Wilson , D. , Chapman , S. C. , Ewing , R. M. , Somerville , S. C. , Peacock , W. J. , Dolferus , R. and Dennis , E. S. 2002 . Expression profile analysis of the low-oxygen response in Arabidopsis root cultures . The Plant Cell , 14 ( 10 ) : 2481 – 2494 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Konig , S. 1998 . Subunit structure, function and organisation of pyruvate decarboxylases from various organisms . Biochim. Biophys. Acta , 1385 : 271 – 286 . [PUBMED] [INFOTRIEVE] [CSA]
  • Kursteiner , O. , Dupuis , I. and Kuhlemeier , C. 2003 . The pyruvate decarboxylase1 gene of Arabidopsis is required during anoxia but not other environmental stresses . Plant Physiol. , 132 ( 2 ) : 968 – 978 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Kwast , K. E. , Lai , L. C. , Menda , N. , James , D. T. , Aref , S. and Burke , P. V. 2002 . Genomic analyses of anaerobically induced genes in Saccharomyces cerevisiae: Functional roles of Rox1 and other factors in mediating the anoxic response . J. Bacteriol. , 184 ( 1 ) : 250 – 265 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Kyozuka , J. , Olive , M. , Peacock , W. , Dennis , E. S. and Shimamoto , K. 1994 . Promoter elements required for developmental expression of the maize Adh1 gene in transgenic rice . The Plant Cell , 6 : 799 – 810 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Lafitte , H. R. , Ismail , A. and Bennett , J. Abiotic stress tolerance in rice for Asia: Progress and the future . 4th International Crop Science Congress . http: //www.cropscience.org.au/icsc2004/pdf/1137_lafitte.pdf
  • Lal , S. K. , Lee , C. and Sachs , M. M. 1998 . Differential regulation of enolase during anaerobiosis in maize . Plant Physiol. , 118 ( 4 ) : 1285 – 1293 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Lemke-Keyes , C. A. and Sachs , M. M. 1989 . Genetic variation for seedling tolerance to anaerobic stress in maize germplasm . Maydica , 34 : 329 – 337 . [CSA]
  • Li , X. , Peng , R. H. , Fan , H. Q. , Xiong , A. S. , Yao , Q. H. , Cheng , Z. M. and Li , Y. 2005 . Vitreoscilla hemoglobin overexpression increases submergence tolerance in cabbage . Plant Cell Rep. , 23 ( 10–11 ) : 710 – 715 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Li , Y. , Ohtsu , K. , Nemoto , K. , Tsutsumi , N. , Hirai , A. and Nakazono , M. 2004 . The rice pyruvate decarboxylase 3 gene, which lacks introns, is transcribed in mature pollen . J. Exp. Bot. , 55 ( 394 ) : 145 – 146 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Liang , P. and Pardee , A. B. 1992 . Differential display of eukaryotic mRNA by means of polymerase chain reaction . Science , 257 : 967 – 971 . [PUBMED] [INFOTRIEVE] [CSA]
  • Liao , C. T. and Lin , C. H. 2001 . Physiological adaptation of crop plants to flooding stress . Proc. Natl. Sci. Council Republic China B , 25 ( 3 ) : 148 – 157 . [CSA]
  • Liu , F. , VanToai , T. , Moy , L. P. , Bock , G. , Linford , L. D. and Quackenbush , J. 2005 . Global transcription profiling reveals comprehensive insights into hypoxic response in Arabidopsis . Plant Physiol. , 137 ( 3 ) : 1115 – 1129 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Liu , L. and Simon , M. C. 2004 . Regulation of transcription and translation by hypoxia . Cancer Biol. Ther. , 3 ( 6 ) : 492 – 497 . [PUBMED] [INFOTRIEVE] [CSA]
  • Locatelli , F. , Bracale , M. , Magaraggia , F. , Faoro , F. , Manzocchi , L. A. and Coraggio , I. 2000 . The Product of the Rice myb7 unspliced mRNA Dimerizes with the Maize Leucine Zipper Opaque2 and Stimulates Its Activity in a Transient Expression Assay . J. Biol. Chem. , 275 ( 23 ) : 17619 – 17625 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Loreti , E. , Poggi , A. , Novi , G. , Alpi , A. and Perata , P. 2005 . A genome-wide analysis of the effects of sucrose on gene expression in arabidopsis seedlings under anoxia . Plant Physiol , 137 ( 3 ) : 1130 – 1138 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Loreti , E. , Yamaguchi , J. , Alpi , A. and Perata , P. 2003 . Sugar modulation of α-amylase genes under anoxia . Annals of Botany , 91 : 143 – 148 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Luttge , V. and Pitman , M. G. 1976 . Transport and energy . Encyl. Plant Physiol. New Ser. , 2A : 251 – 259 . [CSA]
  • Mackill , D. J. 1986 . “ Varietal improvement for rainfed lowland rice in south and southeast Asia: Results of a survey ” . In Progress in Rainfed Lowland Rice , 115 – 144 . Manilla : International Rice Research Institute .
  • Mackill , D. J. , Amante , M. M. , Vergara , B. S. and Sarkarung , S. 1993 . Improved semidwarf rice lines with tolerance to submergence of seedings . Crop Sci. , 33 : 749 – 753 . [CSA]
  • Mackill , D. and Xu , K. 1996 . “ Genetics of seedling-stage submergence tolerance in rice ” . In Rice Genetics III , Edited by: Khush , G . 607 – 612 . Manila, , Philippines : International Rice Research Institute .
  • Maclean , J. L. , Dawe , D. C. , Hardy , B. and Hettel , G. P. , eds. 2002 . Rice Almanac , 253 Los Banos, , Philippines : Int. Rice Res. Inst., Bouake . (Cote d'Ivoire): West Africa Rice Dev. Association, Cali (Colombia): Int. Center for Trop. Agric., Rome (Italy): Food and Agric. Org.
  • Magaraggia , F. , Solinas , G. , Valle , G. , Giovinazzo , G. and Coraggio , I. 1997 . Maturation and translation mechanisms involved in the expression of a myb gene of rice . Plant Mol. Biol. , 35 : 1003 – 1008 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Mahalingam , R. , Gomez-Buitrago , A. M. , Eckardt , N. , Shah , N. , Guevara-Garcia , A. , Day , P. , Raina , R. and Fedoroff , N. V. 2003 . Characterizing the stress/defense transcriptome of Arabidopsis. . Genome Biol. , 4 : R20 [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Mallik , S. , Kundu , C. , Banerji , C. , Nayak , D. , Chatterjee , S. , Nada , K. , Ingram , K. and Setter , T. 1995 . “ Rice germplasm evaluation and improvement for stagnant flooding ” . In Rainfed lowland Rice—Agricultural Research for High Risk Environments , Edited by: Ingram , K. 97 – 109 . Manila, , Philippines : International Rice Research Institute .
  • Manjunath , S. , Lee , C.-H. K. , vanWinkle , P. and Bailey-Serres , J. 1998 . Molecular and biochemical characterization of cytosolic phosphoglucomutase in maize . Plant Physiol. , 117 : 997 – 1006 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Manjunath , S. and Sachs , M. M. 1997 . Molecular characterization and promoter analysis of the maize cytosolic glyceraldehyde 3-phosphate dehydrogenase gene family and its expression during anoxia . Plant Mol. Biol. , 33 : 97 – 112 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Marino , M. , Hoffman , T. , Schmid , R. , Mobitz , H. and Jahn , D. 2000 . Changes in protein synthesis during the adaptation of Bacillus subtilis to anaerobic growth conditions . Microbiol. , 146 : 97 – 105 . [CSA]
  • Matsumura , H. , Takano , T. , Takeda , G. and Uchimiya , H. 1998 . Adh1 is transcriptionally active but its translational product is reduced in a rad mutant of rice (Oryza sativa L.), which is vulnerable to submergence stress . Theor. Appl. Genet. , 97 : 1197 – 1203 . [CROSSREF] [CSA]
  • Maurya , D. M. , Bottrall , A. and Farrington , J. 1998 . Improved livelihoods, genetic diversity and farmer participation: A strategy for rice breeding in rainfed areas of India . Experimental Agriculture , 24 : 311 – 320 . [CSA]
  • Mazerado , A. and Vergara , B. S. Physiological differences in rice varieties tolerant and susceptible to complete submergence . Proceddings of the 1981 International Deepwater Rice Workshop Manila . pp. 327 – 341 . International Rice Research Institute .
  • Mekhedov , S. I. and Kende , H. 1996 . Submergence enhances expression of a gene encoding 1-aminocyclopropane-1-carboxylate oxidase in deepwater rice . Plant Cell Physiol. , 37 ( 4 ) : 531 – 537 . [PUBMED] [INFOTRIEVE] [CSA]
  • Millar , A. A. , Olive , M. R. and Dennis , E. S. 1994 . The expression and anaerobic induction of alcohol dehydrogenase in cotton . Biochem. Genet. , 32 : 279 – 300 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Millar , A. H. , Trend , A. E. and Heazlewood , J. L. 2004 . Changes in the Mitochondrial Proteome during the Anoxia to Air Transition in Rice focus around Cytochrome-containing Respiratory Complexes . J. Biol. Chem. , 279 ( 38) : 39471 – 39478 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Minhas , D. and Grover , A. 1999a . Transcript levels of genes encoding various glycolytic and fermentation enzymes change in response to abiotic stresses . Plant Sci. , 146 : 41 – 51 . [CROSSREF] [CSA]
  • Minhas , D. and Grover , A. 1999B . Towards developing transgenic rice plants tolerant to flooding stress . Proc. Indian. Natl. Sci. Acad. , b65 ( Nos 1&2) : 33 – 50 . [CSA]
  • Mishra , S. K. , Tripp , J. , Winkelhaus , S. , Tschiersch , B. , Theres , K. , Nover , L. and Scharf , K. D. 2002 . In the complex family of heat stress transcription factors, HsfA1 has a unique role as master regulator of thermotolerance in tomato . Genes and Development , 16 ( 12 ) : 1555 – 1567 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Mohanty , H. K. , Mallik , S. and Grover , A. 2000 . Prospects of improving tolerance in lowland rice varieties by conventional breeding and genetic engineering . Current Sci. , 78 : 132 – 137 . [CSA]
  • Moons , A. 2003a . Osgstu3 and Osgtu4, encoding tau class glutathione S-transferases, are heavy metal- and hypoxic stress-induced and differentially salt stress-responsive in rice roots . FEBS Lett. , 553 ( 3 ) : 427 – 432 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Moons , A. 2003b . Ospdr9, which encodes a PDR-type ABC transporter, is induced by heavy metals, hypoxic stress and redox perturbations in rice roots . FEBS Lett. , 553 ( 3 ) : 370 – 376 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Moons , A. , Valcke , R. and Van Montagu , M. 1998 . Low-oxygen stress and water deficit induce cytosolic pyruvate orthophosphate dikinase (PPDK) expression in roots of rice, a C3 plant . Plant J. , 15 ( 1 ) : 89 – 98 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Morard , P. , Silvestre , J. , Lacoste , L. , Caumes , E. and Lamaze , T. 2004 . Nitrate uptake and nitrite release by tomato roots in response to anoxia . J. Plant Physiol. , 161 ( 7 ) : 855 – 865 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Mücke , U. , König , S. and Hübner , G. 1995 . Purification and characterization of pyruvate decarboxylase from pea seeds (Pisum sativum cv. Miko) . Biol. Chem. Hoppe-Seyler , 376 : 111 – 117 . [CSA]
  • Muench , D. G. and Good , A. G. 1994 . Hypoxically inducible barley alanine aminotransferase: cDNA cloning and expression analysis . Plant Mol. Biol. , 24 ( 3 ) : 417 – 427 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Mujer , C. V. , Rumpho , M. E. , Lin , J. J. and Kennedy , R. A. 1993 . Constitutive and inducible aerobic and anaerobic stress proteins in the Echinochloa Complex and Rice . Plant Physiol. , 101 ( 1 ) : 217 – 226 . [PUBMED] [INFOTRIEVE] [CSA]
  • Mustroph , A. and Albrecht , G. 2003 . Tolerance of crop plants to oxygen deficiency stress: Fermentative activity and photosynthetic capacity of entire seedlings under hypoxia and anoxia . Physiol. Plant. , 117 ( 4 ) : 508 – 520 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Nakazono , M. , Tsuji , H. , Li , Y. , Saisho , D. , Arimura , S. , Tsutsumi , N. and Hirai , A. 2000 . Expression of a gene encoding mitochondrial aldehyde dehydrogenase in rice increases under submerged conditions . Plant Physiol. , 124 ( 2 ) : 587 – 598 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Nandi , S. , Subudhi , P. , Senadhira , D. , Manigbas , N. , Sen-Mandi , S. and Huang , N. 1997 . Mapping QTLs for submergence tolerance in rice by AFLP analysis and selective genotyping . Mol. Genet. , 255 : 1 – 8 . [CSA]
  • Nie , X. , Singh , R. P. and Tai , G. C. 2002 . Molecular characterization and expression analysis of 1-aminocyclopropane-1-carboxylate oxidase homologs from potato under abiotic and biotic stresses . Genome , 45 ( 5 ) : 905 – 913 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Okimoto , R. , Sachs , M. M. , Porter , E. K. and Freeling , M. 1980 . Patterns of polypeptide synthesis in various maize organs under anaerobiosis . Planta , 150 : 89 – 94 . [CROSSREF] [CSA]
  • Olien , W. C. 1989 . Seasonal soil waterlogging influences water relations and leaf nutrient content of bearing apple trees . J. Amer. Soc. Hort. Sci. , 114 : 537 – 542 . [CSA]
  • Olive , M. R. , Peacock , W. J. and Dennis , E. S. 1991a . The anaerobic responsive element contains two GC-rich sequences essential for binding a nuclear protein and hypoxic activation of the maize Adh1 promoter . Nucleic Acids Res. , 19 : 7053 – 7060 . [PUBMED] [INFOTRIEVE] [CSA]
  • Olive , M. R. , Walker , J. C. , Singh , K. , Dennis , E. S. and Peacock , W. J. 1990 . Functional properties of the anaerobic response element of the maize Adh1 gene . Plant Mol. Biol. , 15 : 593 – 604 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Olive , M. R. , Walker , J. C. , Singh , K. , Ellis , J. G. , Llewellyn , D. , Dennis , E. S. and Peacock , W. J. 1991b . The anaerobic response element . Plant Mol. Biol. , 2 : 673 – 684 . [CSA]
  • Olson , D. C. , Oetiker , J. H. and Yang , S. F. 1995 . Analysis of LE-ACS3, a 1-aminocyclopropane-1-carboxylic acid synthase gene expressed during flooding in the roots of tomato plants . J. Biol. Chem. , 270 ( 23 ) : 14056 – 14061 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Paul , A. L. , Schuerger , A. C. , Popp , M. P. , Richards , J. T. , Manak , M. S. and Ferl , R. J. 2004 . Hypobaric biology: Arabidopsis gene expression at low atmospheric pressure . Plant Physiol. , 134 ( 1 ) : 215 – 223 . [PUBMED] [INFOTRIEVE] [CSA]
  • Peeters , A. J. M. , Cox , M. C. H. , Benschop , J. J. , Vreeburg , R. A. M. , Bou , J. and Voesenek , L. A. C. J. 2002 . Submergence research using Rumex palustris as a model; looking back and going forward . J. Exp. Bot. , 53 ( 368 ) : 391 – 398 . [PUBMED] [INFOTRIEVE] [CSA]
  • Peng , H. P. , Chan , C. S. , Shih , M. C. and Yang , S. F. 2001 . Signaling events in the hypoxic induction of Adh in Arabidopsis . Plant Physiol. , 126 : 742 – 749 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Perata , P. and Alpi , A. 1993 . Plant responses to anaerobiosis . Plant Sci. , 93 : 1 – 17 . [CROSSREF] [CSA]
  • Perata , P. , Guglielminetti , L. and Alpi , A. 1986 . Anaerobic carbohydrate metabolism in wheat and barley, two anoxia-intolerant cereal seeds . J. Exp. Bot. , 47 : 999 – 1006 . [CSA]
  • Peschke , V. M. and Sachs , M. M. 1993 . Multiple pyruvate decarboxylase genes in maize are induced by hypoxia . Mol. Gen. Genetics , 240 : 206 – 212 . [CROSSREF] [CSA]
  • Pfister-Sieber , M. and Brändle , R. 1994 . Aspects of plant behaviour under anoxia and post-anoxia . Proceedings of the Royal Society of Edinburgh , 102b : 313 – 324 . [CSA]
  • Prioul , J. L. and Guyot , C. 1985 . Role of oxygen transport and nitrate metabolism in the adaptation of wheat plants to root anaerobiosis . Physiol. Veg. , 23 : 175 – 185 . [CSA]
  • Provart , N. J. , Gil , P. , Chen , W. , Han , B. , Chang , S. , Wang , X. and Zhu , T. 2003 . Gene Expression Phenotypes of Arabidopsis Associated with Sensitivity to Low Temperatures . Plant Physiol. , 132 : 893 – 906 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Qi , Y. , Kawano , N. , Yamauchi , Y. , Ling , J. , Li , D. and Tanaka , K. 2005 . Identification and cloning of a submergence-induced gene OsGGT (Glycogenin glucosyltransferase) from rice (Oryza sativa L.) plants by suppression subtractive hybridization . Planta , 221 ( 3 ) : 437 – 445 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Qi , Y. , Yamauchi , Y. , Ling , J. , Kawano , N. , Li , D. and Tanaka , K. 2004 . Cloning of a putative monogalactosyldiacylglycerol synthase gene from rice (Oryza sativa L.) plants and its expression in response to submergence and other stresses . Planta , 219 ( 3 ) : 450 – 458 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Quimio , C. A. , Torrizo , L. B. , Setter , T. L. , Ellis , M. , Grover , A. , Abrigo , E. M. , Oliva , N. P. , Ella , E. S. , Carpena , A. L. and Ito , O. 2000 . Enhancement of submergence tolerance in transgenic rice overproducing pyruvate decarboxylase . J. Plant Physiol. , 156 : 516 – 521 . [CSA]
  • Rabbani , M. A. , Maruyama , K. , Abe , H. , Khan , M. A. , Katsura , K. , Ito , Y. , Yoshiwara , K. , Seki , M. , Shinozaki , K. and Yamaguchi-Shinozaki , K. 2003 . Monitoring expression profiles of rice genes under cold, drought, and high-salinity stresses and abscisic acid application using cDNA microarray and RNA gel-blot analyses . Plant Physiol. , 133 : 1755 – 1767 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Rahman , M. , Grover , A. , Peacock , W. J. , Dennis , E. S. and Ellis , M. H. 2001 . Effects of manipulation of pyruvate decarboxylase and alcohol dehydrogenase levels on the submergence tolerance of rice . Australian J. Plant Physiol. , 28 ( 12 ) : 1231 – 1241 . [CSA]
  • Ram , P. , Singh , B. , Singh , A. , Ram , P. , Singh , P. , Singh , H. , Boamfa , I. , Harren Santosa , F. , Jackson , M. , Setter , T. , Reuss , J. , Wade , L. , Singh , V. and Singh , R. 2002 . Submergence tolerance in rainfed lowland rice: Physiological basis and prospects for cultivar improvement through marker-aided breeding . Field Crops Res. , : 131 – 152 . [CROSSREF] [CSA]
  • Ratcliffe , R. G. 1995 . “ Metabolic aspects of the anoxic response in plant tissue ” . In Environment and Plant Metabolism: Flexibility and Acclimation , Edited by: Smirnoff , N. 111 – 127 . Oxford : Bios Scientific .
  • Reggiani , R. , Bertani , A. and Mattana , M. 1995 . Incorporation of nitrate nitrogen into amino acids during the anaerobic germination of rice . Amino Acids , 9 : 385 – 390 . [CROSSREF] [CSA]
  • Reggiani , R. , Cantú , C. A. , Brambilla , I. and Bertani , A. 1988 . Accumulation and interconversion of amino acids in rice roots under anoxia . Plant Cell Physiol. , 29 : 982 – 987 . [CSA]
  • Ricard , B. , Couée , I. , Raymond , P. , Saglio , P. H. , Saint-Ges , V. and Pradet , A. 1994 . Plant metabolism under hypoxia and anoxia . Plant Physiol. Biochem. , 32 : 1 – 10 . [CSA]
  • Ricard , B. , Mocquot , B. , Fournier , A. , Delseny , M. and Pradet , A. 1986 . Expression of alcohol dehydrogenase in rice embryos under anoxia . Plant Mol. Biol. , 7 : 321 – 329 . [CROSSREF] [CSA]
  • Ricard , B. , Rivoal , J. and Pradet , A. 1989 . Rice alcohol cytosolic glyceraldehyde-3-phosphate dehydrogenase contains two subunits differentially regulated by anaerobiosis . Plant Mol. Biol. , 12 : 131 – 139 . [CROSSREF] [CSA]
  • Rishi , A. S. , Nelson , N. D. and Goyal , A. 2002 . “ DNA microarrays: Gene expression profiling in plants ” . In Reviews in Plant Biochemistry and Biotechnology Edited by: Arun Goyal , A. , Mehta , S. L. and Lodha , M. L. Vol. I , 81 – 100 .
  • Rivoal , J. , Ricard , B. and Pradet , A. 1989 . Glycolytic and fermentative enzyme induction during anaerobiosis in rice seedlings . Plant Physiol. Biochem. , 27 : 43 – 52 . [CSA]
  • Rivoal , J. , Ricard , B. and Pradet , A. 1990 . Purification and partial characterization of pyruvate decarboxylase from Oryza sativa L . Eur. J. Biochem. , 194 : 791 – 797 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Rivoal , J. , Thind , S. , Pradet , A. and Ricard , B. 1997 . Differential induction of pyruvate decarboxylase subunits and transcripts in anoxic rice seedlings . Plant Physiol. , 114 ( 3 ) : 1021 – 1029 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Roberts , J. K. M. , Andrade , F. H. and Anderson , I. C. 1985 . Further evidence that cytoplasmic acidosis is a determinant of flooding intolerance in plants . Plant Physiol. , 77 : 492 – 494 . [CSA]
  • Roberts , J. K. M. , Callis , J. , Jardetzky , O. , Walbot , V. and Freeling , M. 1984 . Cytoplasmic acidosis as a determinant of flooding intolerance in plants . Proc. Natl. Acad. Sci. USA , 81 : 6029 – 6033 . [PUBMED] [INFOTRIEVE] [CSA]
  • Saab , I. N. and Sachs , M. M. 1996 . A flooding-induced xyloglucan endo-transglycosylase homolog in maize is responsive to ethylene and associated with aerenchyma . Plant Physiol. , 112 : 385 – 391 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sachs , M. M. and Freeling , M. 1978 . Selective synthesis of alcohol dehydrogenase during anaerobic treatment of maize . Mol. Gen. Genetics , 161 : 111 – 115 . [CSA]
  • Sachs , M. M. , Freeling , M. and Okimoto , R. 1980 . The anaerobic proteins of maize . Cell , 20 : 761 – 767 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sachs , M. M. , Subbaiah , C. C. and Saab , I. N. 1996 . Anaerobic gene expression and flooding tolerance in maize . J. Exp. Bot. , 47 : 1 – 15 . [CSA]
  • Sato , T. , Harada , T. and Ishizawa , K. 2002 . Stimulation of glycolysis in anaerobic elongation of pondweed (Potamogeton distinctus) turions . J. Exp. Bot. , 53 ( 376 ) : 1847 – 1856 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sauter , M. 2000 . Rice in deep water: “How to take heed against a sea of troubles” . Naturwissenschaften , 87 : 289 – 303 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sauter , M. , Rzewuski , G. , Marwedel , T. and Lorbiecke , R. 2002 . The novel ethylene-regulated gene OsUsp1 from rice encodes a member of a plant protein family related to prokaryotic universal stress proteins . J. Exp. Bot. , 53 ( 379 ) : 2325 – 2331 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sell , S. and Hehl , R. 2004 . Functional dissection of a small anaerobically induced bZIP transcription factor from tomato . Eur. J. Biochem. , 271 : 4534 – 4544 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Semenza , G. L. 2001 . HIF-1, O2 and the 3 PHDs: How animal cells signal hypoxia to the nucleus . Cell , 107 : 1 – 3 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Semenza , G. L. , Roth , P. H. , Fang , F. M. and Wang , G. L. 1994 . Transcriptional regulation of genes encoding glycolytic enzymes by hypoxia-inducible factor1 . J. Biol. Chem. , 269 : 23757 – 23763 . [PUBMED] [INFOTRIEVE] [CSA]
  • Seregelyes , C. , Mustardy , L. , Ayaydin , F. , Sass , L. , Kovacs , L. , Endre , G. , Lukacs , N. , Kovacs , I. , Vass , I. , Kiss , G. B. , Horvath , G. V. and Dudits , D. 2000 . Nuclear localization of a hypoxia–inducible novel non-symbiotic hemoglobin in cultured alfalfa cells . FEBS Lett. , 482 ( 1–2 ) : 125 – 130 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Seta , K. A. and Millhorn , D. E. 2004 . Functional genomics approach to hypoxia signaling . J. Appl. Physiol. , 96 : 765 – 773 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Setter , T. , Ella , E. and Valdez , A. 1994 . Relationship between coleoptile elongation and alcoholic fermentation in rice exposed to anoxia. II. Cultivar differences . Annals of Botany , 74 : 273 – 279 . [CROSSREF] [CSA]
  • Setter , T. , Ellis , M. , Laureles , E. , Ella , E. , Senadhira , D. , Mishra , S. , Sarkarung , S. and Datta , S. 1997 . Physiology and genetics of submergence tolerance in rice . Annals of Botany , 79 : 67 – 77 . [CROSSREF] [CSA]
  • Setter , T. and Laureles , E. 1996 . The beneficial effect of reduced elongation growth on submergence tolerance of rice . J. Exp. Bot. , 47 : 1551 – 1559 . [CSA]
  • Shen , C. and Powell-Coffman , J. A. 2003 . Genetic Analysis of Hypoxia Signaling and Response in C. elegans . Annals of the New York Academy of Sciences , 995 : 191 – 199 . [PUBMED] [INFOTRIEVE] [CSA]
  • Shinozaki , K. and Yamaguchi-Shinozaki , K. 1997 . Gene expression and signal transduction in water-stress response . Plant Physiol. , 115 : 327 – 334 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Shiu , O. Y. , Oetiker , J. H. , Yip , W. K. and Yang , S. F. 1998 . The promoter of LE-ACS7, an early flooding-induced 1-aminocyclopropane-1-carboxylate synthase gene of the tomato, is tagged by a Sol3 transposon . Proc. Natl. Acad. Sci. USA , 95 ( 17 ) : 10334 – 10339 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Siangliw , M. , Toojinda , T. , Tragoonrung , S. and Vanavichit , A. 2003 . Thai jasmine rice carrying QTLch9 (SubQTL) is submergence tolerant . Annals of Botany , 91 : 255 – 261 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Singh , H. P. , Singh , B. B. and Ram , P. C. 2001 . Submergence tolerance of rainfed lowland rice: Search for marker traits . J. Plant Physiol. , 158 : 883 – 889 . [CROSSREF] [CSA]
  • Singh , R. and Dwivedi , J. Rice improvement for rainfed lowland ecosystem: Breeding methods and practices in Eastern India . Proc. Intl. Workshop . Nov 5–8 1996 . Breeding Strategies for Rainfed Lowland Rice in Drought-Prone Environments , Edited by: Fukais , S. , Cooper , M. and Salisbury , J. pp. 50 – 57 . Canberra : ACIAR .
  • Singh , S. , Singh , O. and Singh , R. 1998 . “ A shuttle breeding approach to rice improvement for rainfed lowland ecosystem in eastern India ” . In Sustainable Agriculture for Food, Energy and Industry , Edited by: El Bassam , N. , Behl , P. K. and Prochnow , B. 105 – 115 . London, UK : James & James Science Publishers Ltd. .
  • Sowa , A. W. , Duff , S. M. G. , Guy , P. A. and Hill , R. D. 1998 . Altering hemoglobin levels changes energy status in maize cells under hypoxia . Proc. Natl. Acad. Sci. USA , 95 ( 17 ) : 10317 – 10321 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Sripongpangkul , K. , Posa , G. B. T. , Senadhira , D. W. , Brar , D. , Huang , N. , Khush , G. S. and Li , Z. K. 2000 . Genes/QTLs affecting flood tolerance in rice . Theor. Appl. Genet. , 101 : 1074 – 1081 . [CROSSREF] [CSA]
  • Stewart , G. R. and Larher , F. 1980 . “ Accumulation of amino acids and related compounds in relation to environmental stress ” . In The Biochemistry of Plants , Edited by: Miflin , B. J. Vol. 5 , 609 – 635 . New York : Academic Press .
  • Streeter , J. G. and Thompson , J. F. 1972 . Anaerobic accumulation of gamma-aminobutyric acid and alanine in radish leaves (Raphanus sativus L.) . Plant Physiol. , 49 : 572 – 578 . [CSA]
  • Subbaiah , C. C. and Sachs , M. M. 2000 . Maize cap1 encodes a novel SERCA-type calcium-ATPase with a calmodulin-binding domain . J. Biol. Chem. , 275 ( 28 ) : 21678 – 21687 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Subbaiah , C. C. and Sachs , M. M. 2001 . Altered patterns of sucrose synthase phosphorylation and localization precede callose induction and root tip death in anoxic maize seedlings . Plant Physiol. , 125 ( 2 ) : 585 – 594 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Subbaiah , C. C. and Sachs , M. M. 2003 . Molecular and cellular adaptations of maize to flooding stress . Annals of Botany , 91 : 119 – 127 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Subbaiah , C. C. , Kollipara , K. P. and Sachs , M. M. 2000 . A Ca(2+)-dependent cysteine protease is associated with anoxia–induced root tip death in maize . J. Exp. Bot. , 51 ( 345 ) : 721 – 730 . [PUBMED] [INFOTRIEVE] [CSA]
  • Subbaiah , C. C. , Zhang , J. and Sachs , M. M. 1994 . Involvement of intracellular calcium in anaerobic gene expression and survival of maize seedlings . Plant Physiol. , 105 : 369 – 376 . [PUBMED] [INFOTRIEVE] [CSA]
  • Suge , H. and Murakami , Y. 1968 . Occurrence of a rice mutant deficient in gibberellin-like substances . Plant Cell Physiol. , 9 : 411 – 414 . [CSA]
  • Suprihatno , B. and Coffman , W. 1981 . Inheritance of submergence tolerance in rice (Oryza sativa L.) . SABRAO J. , 13 : 98 – 108 . [CSA]
  • Tadege , M. , Brandle , R. and Kuhlemeier , C. 1998 . Anoxia tolerance in tobacco roots: Effect of overexpression of pyruvate decarboxylase . Plant J. , 14 : 327 – 335 . [CROSSREF] [CSA]
  • Tadege , M. , Dupuis , I. and Kuhlemeier , C. 1999 . Ethanolic fermentation: New functions for an old pathway . Trends Plant Sci. , 4 : 320 – 325 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Tadege , M. and Kuhlemeier , C. 1997 . Aerobic fermentation during tobacco pollen development . Plant Mol. Biol. , 35 : 343 – 354 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Taylor , E. R. , Nie , X. Z. , MacGregor , A. W. and Hill , R. D. 1994 . A cereal haemoglobin gene is expressed in seed and root tissues under anaerobic conditions . Plant Mol. Biol. , 24 ( 6 ) : 853 – 862 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Toojinda , T. , Siangliw , M. , Tragoonrung , S. and Vanavichit , A. 2003 . Molecular genetics of submergence tolerance in rice: QTL analysis of key traits . Annals of Botany , 91 : 243 – 253 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Tsuji , H. , Meguro , N. , Suzuki , Y. , Tsutsumi , N. , Hirai , A. and Nakazono , M. 2003 . Induction of mitochondrial aldehyde dehydrogenase by submergence facilitates oxidation of acetaldehyde during re-aeration in rice . FEBS Lett. , 546 ( 2–3 ) : 369 – 373 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Ueguchi-Tanaka , M. , Fujisawa , Y. , Kobayashi , M. , Ashikari , M. , Iwasaki , Y. , Kitano , H. and Matsuoka , M. 2000 . Rice dwarf mutant d1, which is defective in the Error: figure isn't in document subunit of the heterotrimeric G protein, affects gibberellin signal transduction . Proc. Natl. Acad. Sci. USA , 97 : 11638 – 11643 . http: //www.plantcell.org/math/agr.gif [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Umeda , M. and Uchimiya , H. 1994 . Differential Transcript Levels of Genes Associated with Glycolysis and Alcohol Fermentation in Rice Plants (Oryza sativa L.) under Submergence Stress . Plant Physiol. , 106 ( 3 ) : 1015 – 1022 . [PUBMED] [INFOTRIEVE] [CSA]
  • van , d er , Knaap , E. , Jagoueix , S. and Kende , H. 1997 . Expression of an ortholog of replication protein A1 (RPA1) is induced by gibberellin in deepwater rice . Proc. Natl. Acad. Sci. USA , 94 ( 18 ) : 9979 – 9983 . [CROSSREF] [CSA]
  • van , D er , Straeten , D. , Rodrigues Pousada , R. A. , Gielen , J. and Van Montagu , M. 1991 . Tomato alcohol dehydrogenase. Expression during fruit ripening and under hypoxic conditions . FEBS Lett. , 295 ( 1–3 ) : 39 – 42 . [CSA]
  • van , D er , Straeten , D. , Zhou , Z. , Prinsen , E. , Van Onckelen , H. A. and Van Montagu , M. C. 2001 . A comparative molecular-physiological study of submergence response in lowland and deepwater rice . Plant Physiol. , 125 ( 2 ) : 955 – 968 . [CROSSREF] [CSA]
  • vanTaoi , T. T. , St. Martin , S. K. , Chase , K. , Boru , G. , Schnipke , V. , Schmitthenner , A. F. and Lark , K. G. 2001 . Identification of a QTL associated with tolerance of soyabean to soil waterlogging . Crop Sci. , 41 : 1247 – 1252 . [CSA]
  • Vartapetian , B. B. and Jackson , M. B. 1997 . Plant adaptations to anaerobic stress . Annals of Botany , 79 : 3 – 20 . [CROSSREF] [CSA]
  • Velculescu , V. , Zhang , L. , Vogelstein , B. and Kinzler , K. 1995 . Serial analysis of gene expression . Science , 270 : 484 – 487 . [PUBMED] [INFOTRIEVE] [CSA]
  • Visser , W. , Scheffers , W. A. , Batenburg-van der Vegte , W. H. and van Dijken , J. P. 1990 . Oxygen requirements of yeasts . Appl. Environ. Microbiol. , 56 : 3785 – 3792 . [PUBMED] [INFOTRIEVE] [CSA]
  • Vriezen , W. H. , De Graaf , B. , Mariani , C. and Voesenek , L. A. 2000 . Submergence induces expansin gene expression in flooding-tolerant Rumex palustris and not in flooding-intolerant R.acetosa . Planta , 210 ( 6 ) : 956 – 963 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Vriezen , W. H. , Hulzink , R. , Mariani , C. and Voesenek , L. A. 1999 . 1-aminocyclopropane-1-carboxylate oxidase activity limits ethylene biosynthesis in Rumex palustris during submergence . Plant Physiol. , 121 ( 1 ) : 189 – 196 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Walker , J. C. , Howard , E. A. , Dennis , E. S. and Peacock , W. J. 1987 . DNA sequences required for anaerobic expression of the maize Adh1 gene . Proc. Natl. Acad. Sci. USA , 84 : 6624 – 6629 . [CSA]
  • Wample , R. L. and Reid , D. M. 1978 . Control of adventious root production and hypocotyl hypertrophy of sunflower (Helianthus annus) in response to flooding . Physiol. Plant. , 44 : 351 – 358 . [CSA]
  • Watanabe , H. , Saigusa , M. , Hase , S. , Hayakawa , T. and Satoh , S. 2004 . Cloning of a cDNA encoding an ETR2-like protein (Os-ERL1) from deep water rice (Oryza sativa L.) and increase in its mRNA level by submergence, ethylene, and gibberellin treatments . J. Exp. Bot. , 55 ( 399 ) : 1145 – 1148 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Waters , I. , Morrell , S. , Greenway , H. and Colmer , T. D. 1991 . Effects of anoxia on wheat seedlings. II. Influence of O2 supply prior to anoxia on tolerance to anoxia, alcoholic fermentation, and sugar levels . J. Exp. Bot. , 42 : 1437 – 1447 . [CSA]
  • Webster , C. , Gaut , R. L. , Browning , K. S. , Ravel , J. M. and Roberts , J. K. M. 1991 . Hypoxia enhances phosphorylation of eukaryotic initiation factor 4A in maize root tips . J. Biol. Chem. , 266 : 23341 – 23346 . [PUBMED] [INFOTRIEVE] [CSA]
  • Webster , K. A. 2003 . Evolution of the coordinate regulation of glycolytic enzyme genes by hypoxia . J. Exp. Biol. , 206 : 2911 – 2922 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Widawsky , D. A. and O'Toole , J. C. 1990 . Prioritizing the Rice Biotechnology Research Agenda for Eastern India , New York : The Rockefeller Foundation .
  • Woodrow , L. and Grodzinski , B. 1989 . An evaluation of the effects of ethylene on carbon assimilation in Lycopersicon esculentum . J. Exp. Bot. , 40 : 361 – 368 . [CSA]
  • Xia , J. H. and Roberts , J. 1996 . Regulation of H+ Extrusion and Cytoplasmic pH in Maize Root Tips Acclimated to a Low-Oxygen Environment . Plant Physiol. , 111 ( 1 ) : 227 – 233 . [PUBMED] [INFOTRIEVE] [CSA]
  • Xie , Y. and Wu , R. 1989 . Rice alcohol dehydrogenase genes: Anaerobic induction, organ specific expression and characterization of cDNA clones . Plant Mol. Biol. , 13 : 53 – 68 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Xu , K. , Deb , R. and Mackill , D. J. 2004 . A Microsatellite Marker and a Codominant PCR-Based Marker for Marker-Assisted Selection of submergence tolerance in Rice . Crop Sci. , 44 : 248 – 253 . [CSA]
  • Xu , K. and Mackill , D. 1996 . A major locus for submergence tolerance mapped on rice chromosome 9 . Mol. Breed. , 2 : 219 – 224 . [CROSSREF] [CSA]
  • Xu , K. , Xu , X. , Ronalds , P. and Mackill , D. 2000 . A high-resolution linkage map in the vicinity of the rice submergence tolerance locus Sub1 . Mol. Gen. Genet. , 263 : 681 – 689 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Yang , Z. 2002 . Small GTPases: Versatile Signaling Switches in Plants . The Plant Cell , 14 : S375 – 388 . [PUBMED] [INFOTRIEVE] [CSA]
  • Zarembinski , T. I. and Theologis , A. 1993 . Anaerobiosis and plant growth hormones induce two genes encoding 1-aminocyclopropane-1-carboxylate synthase in rice (Oryza sativa L.) . Mol. Biol. Cell , 4 ( 4 ) : 363 – 373 . [PUBMED] [INFOTRIEVE] [CSA]
  • Zehender , H. , Trescher , D. and Ullrich , J. 1987 . Improved purification of pyruvate decarboxylase from wheat germ. Its partial characterization and comparison with the yeast enzyme . Eur. J. Biochem. , 167 : 149 – 154 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Zeng , Y. , Wu , Y. , Avigne , W. T. and Koch , K. E. 1999 . Rapid repression of maize invertases by low oxygen. Invertase/sucrose synthase balance, sugar signaling potential, and seedling survival . Plant Physiol. , 121 ( 2 ) : 599 – 608 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]
  • Zhang , J. , VanToai , T. , Huynh , L. and Preiszner , J. 2000 . Development of flooding-tolerant Arabidopsis thaliana by autoregulated cytokinin production . Mol. Breed. , 6 : 135 – 144 . [CROSSREF] [CSA]
  • Zhou , Z. , de Almeida Engler , J. , Rouan , D. , Michiels , F. , Van Montagu , M. and Van Der Straeten , D. 2002 . Tissue localization of a submergence-induced 1-aminocyclopropane-1-carboxylic acid synthase in rice . Plant Physiol. , 129 ( 1 ) : 72 – 84 . [PUBMED] [INFOTRIEVE] [CROSSREF] [CSA]

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.