Molecular Strategies for Addressing Gene Flow Problems and Their Potential Applications in Abiotic Stress Tolerant Transgenic Plants

REFERENCES

• Acciarri, N., Restaino, F., Vitelli, G., Perrone, D., Zottini, M., Pandolfini, T., Spena, A., and Rotino, G. 2002. Genetically modified parthenocarpic eggplants: improved fruit productivity under both greenhouse and open field cultivation. BMC Biotechnol. 2: 4–10.
   PubMedGoogle Scholar
• Ahmad, P., Ashraf, M., Younis, M., Hu, X., Kumar, A., Akram, N.A., and Al-Qurainy, F. 2012. Role of transgenic plants in agriculture and biopharming. Biotechnol. Adv. 30: 524–540.
   PubMed Web of Science ®Google Scholar
• Ampomah-Dwamena, C., Morris, B.A., Sutherland, P., Veit, B., and Yao, J.L. 2002. Down-regulation of TM29, a tomato SEPALLATA homolog, causes parthenocarpic fruit development and floral reversion. Plant Physiol. 130: 605–617.
   PubMed Web of Science ®Google Scholar
• Ashraf, M. 2010. Inducing drought tolerance in plants: recent advances. Biotechnol. Adv. 28: 169–183.
   PubMed Web of Science ®Google Scholar
• Austin, S., Ziese, M., and Sternberg, N. 1981. A novel role for site-specific recombination in maintenance of bacterial replicons. Cell 25: 729–736.
   PubMed Web of Science ®Google Scholar
• Bansal, K.C., Singh, A.K., and Wani, S.H. 2012. Plastid transformation for abiotic stress tolerance in plants. Methods Mol. Biol. 913: 351–358.
   PubMedGoogle Scholar
• Basu, S.K., Dutta, M., Goyal, A., Bhowmik, P.K., Kumar, J., Nandy, S., Scagliusi, S.M., and Prasad, R. 2010. Is genetically modified crop the answer for the next green revolution? GM Crops 1: 68–79.
   PubMedGoogle Scholar
• Belostotsky, D.A. and Meagher, R.B. 1996. A pollen-, ovule-, and early embryo-specific poly(A) binding protein from Arabidopsis complements essential functions in yeast. Plant Cell 8: 1261–1275.
   PubMed Web of Science ®Google Scholar
• Bernardo, R. and Charcosset, A. 2006. Usefulness of gene information in marker-assisted recurrent selection: a simulation appraisal. Crop Science 46: 614–621.
   Web of Science ®Google Scholar
• Bock, R. 2001. Transgenic plastids in basic research and plant biotechnology. J. Mol. Biol. 312: 425–438.
   PubMed Web of Science ®Google Scholar
• Budar, F. and Berthome, R. 2007. Cytoplasmic male sterilities and mitochondrial gene mutations in plants. In: Plant Mitochondria. pp. 50–95. Logan, D., Ed., Blackwell Publishing, Ames, IA.
   Google Scholar
• Burgess, D.G., Ralston, E.J., Hanson, W.G., Heckert, M., Ho, M., Jenq, T., Palys, J.M., Tang, K., and Gutterson, N. 2002. A novel, two-component system for cell lethality and its use in engineering nuclear male-sterility in plants. Plant J. 31: 113–125.
   PubMed Web of Science ®Google Scholar
• Carmi, N., Salts, Y., Dedicova, B., Shabtai, S., and Barg, R. 2003. Induction of parthenocarpy in tomato via specific expression of the rolB gene in the ovary. Planta 217: 726–735.
   PubMed Web of Science ®Google Scholar
• Chen, Y., Lu, L., Deng, W., Yang, X., McAvoy, R., Zhao, D., Pei, Y., Luo, K., Duan, H., Smith, W., Thammina, C., Zheng, X., Ellis, D., and Li, Y. 2006. In vitro regeneration and Agrobacterium-mediated genetic transformation of Euonymus alatus. Plant Cell Rep. 25: 1043–1051.
   PubMed Web of Science ®Google Scholar
• Chen, Y., Lu, L., Yang, X., Duan, H., Deng, W., McAvoy, R., Zhao, D., Smith, W., Thammina, C., von Bodman, S., and Li, Y. 2008. Biotech approach to neutralize the invasiveness of burning bush (Euonymus alatus), a progress report on development of its genetic transformation system and functional analysis of sterile genes. Acta Hort. 769: 10–30.
   Google Scholar
• Cho, H.J., Kim, S., Kim, M., and Kim, B.D. 2001. Production of transgenic male sterile tobacco plants with the cDNA encoding a ribosome inactivating protein in Dianthus sinensis L. Mol. Cells 11: 326–333.
   PubMed Web of Science ®Google Scholar
• Colombo, L., Franken, J., Van der Krol, A.R., Wittich, P.E., Dons, H.J., and Angenent, G.C. 1997. Downregulation of ovule-specific MADS box genes from petunia results in maternally controlled defects in seed development. Plant Cell 9: 703–715.
   PubMed Web of Science ®Google Scholar
• Conner, A.J., Glare, T.R., and Nap, J.P. 2003. The release of genetically modified crops into the environment. Part II. Overview of ecological risk assessment. Plant J. 33: 19–36.
   PubMed Web of Science ®Google Scholar
• Daniell, H. 2002. Molecular strategies for gene containment in transgenic crops. Nat. Biotechnol. 20: 581–586.
   PubMed Web of Science ®Google Scholar
• Daniell, H. 2007. Transgene containment by maternal inheritance: effective or elusive? Proc. Natl. Acad. Sci. USA 104: 6879–6880.
   PubMed Web of Science ®Google Scholar
• De Cosa, B., Moar, W., Lee, S.B., Miller, M., and Daniell, H. 2001. Overexpression of the Bt cry2Aa2 operon in chloroplasts leads to formation of insecticidal crystals. Nat. Biotechnol. 19: 71–74.
   PubMed Web of Science ®Google Scholar
• De Jong, M., Wolters-Arts, M., Feron, R., Mariani, C., and Vriezen, W.H. 2009. The Solanum lycopersicum auxin response factor 7 (SlARF7) regulates auxin signaling during tomato fruit set and development. Plant J. 57: 160–170.
   PubMed Web of Science ®Google Scholar
• De Martinis, D. and Mariani, C. 1999. Silencing gene expression of the ethyleneforming enzyme results in a reversible inhibition of ovule development in transgenic tobacco plants. Plant Cell 11: 1061–1072.
   PubMed Web of Science ®Google Scholar
• Deikman, J., Petracek, M., and Heard, J.E. 2012. Drought tolerance through biotechnology: improving translation from the laboratory to farmers’ fields. Curr. Opin. Biotechnol. 23: 243–250.
   PubMed Web of Science ®Google Scholar
• Ellstrand, N.C. 2001. When transgenes wander, should we worry? Plant Physiol. 125: 1543–1545.
   PubMed Web of Science ®Google Scholar
• Fedoroff, N.V., Battisti, D.S., Beachy, R.N., Cooper, P.J., Fischhoff, D.A., Hodges, C.N., Knauf, V.C., Lobell, D., Mazur, B.J., Molden, D., Reynolds, M.P., Ronald, P.C., Rosegrant, M.W., Sanchez, P.A., Vonshak, A., and Zhu, J.K. 2010. Radically rethinking agriculture for the 21st century. Science 327: 833–834.
   PubMed Web of Science ®Google Scholar
• Ferrandiz, C., Pelaz, S., and Yanofsky, M.F. 1999. Control of carpel and fruit development in Arabidopsis. Annu. Rev. Biochem. 68: 321–354.
   PubMed Web of Science ®Google Scholar
• Forcella, F. 1985. Final distribution is related to rate of spread in alien weeds. Weed Res. 25: 181–191.
   Web of Science ®Google Scholar
• Franklin, S.E. and Mayfield, S.P. 2004. Prospects for molecular farming in the green alga Chlamydomonas. Curr. Opin. Plant Biol. 7: 159–165.
   PubMed Web of Science ®Google Scholar
• Gardner, N., Felsheim, R., and Smith, A.G. 2009. Production of male- and female-sterile plants through reproductive tissue ablation. J. Plant Physiol. 166: 871–881.
   PubMed Web of Science ®Google Scholar
• Giovannetti, M. 2003. The ecological risks of transgenic plants. Riv. Biol. 96: 207–223.
   PubMed Web of Science ®Google Scholar
• Goetz, M., Godt, D.E., Guivarc’h, A., Kahmann, U., Chriqui, D., and Roitsch, T. 2001. Induction of male sterility in plants by metabolic engineering of the carbohydrate supply. Proc. Natl. Acad. Sci. USA 98: 6522–6527.
   PubMed Web of Science ®Google Scholar
• Goldberg, R.B., Beals, T.P., and Sanders, P.M. 1993. Anther development: Basic principles and practical applications. Plant Cell 5: 1217–1229.
   PubMed Web of Science ®Google Scholar
• Goldman, M.H., Goldberg, R.B., and Mariani, C. 1994. Female sterile tobacco plants are produced by stigma-specific cell ablation. EMBO J. 13: 2976–2984.
   PubMed Web of Science ®Google Scholar
• Gressel, J. and Al-Ahmad., H. 2005. Molecular containment and mitigation of genes within crops - prevention of gene establishment in volunteer offspring and feral strains. In: Crop ferality and volunteerism. pp. 371–388. Gressel, J., Ed., CRC Press.
   Google Scholar
• Grevich, J.J. and Daniell, H. 2005. Chloroplast genetic engineering: recent advances and future perspectives. Crit. Rev. Plant Sci. 24: 83–107.
   Web of Science ®Google Scholar
• Guilfoyle, T.J., Hagen, G., Li, Y., Ulmasov, T., Liu, Z., Strabala, T., and Gee, M.A. 1993. Auxin-regulated transcription. Aust. J. Plant Physiol. 20: 489–502.
   Google Scholar
• Hagen, G., Martin, G., Li, Y., and Guilfoyle, T.J. 1991. Auxin-induced expression of the soybean GH3 promoter in transgenic tobacco plants. Plant Mol. Biol. 17: 567–579.
   PubMed Web of Science ®Google Scholar
• Heffner, E.L., Sorrels, M.R., and Jannink, J-L. 2009. Genomic selection for crop improvement. Crop Science 49: 1–12.
   Web of Science ®Google Scholar
• Hernould, M., Suharsono, S., Litvak, S., Araya, A., and Mouras, A. 1993. Male-sterility induction in transgenic tobacco plants with an unedited atp9 mitochondrial gene from wheat. Proc. Natl. Acad. Sci. USA 90: 2370–2374.
   PubMed Web of Science ®Google Scholar
• Hernould, M., Suharsono, S., Zabaleta, E., Carde, J.P., Litvak, S., Araya, A., and Mouras, A. 1998. Impairment of tapetum and mitochondria in engineered male-sterile tobacco plants. Plant Mol. Biol. 36: 499–508.
   PubMed Web of Science ®Google Scholar
• Heuberger, S., Ellers-Kirk, C., Tabashnik, B.E., and Carrière, Y. 2010. Pollen- and seed-mediated transgene flow in commercial cotton seed production fields. PLoS One 5: e14128.
   PubMed Web of Science ®Google Scholar
• Hills, M.J., Hall, L., Arnison, P.G., and Good, A.G. 2007. Genetic use restriction technologies (GURTs): strategies to impede transgene movement. Trends Plant Sci. 12: 177–183.
   PubMed Web of Science ®Google Scholar
• Höfig, K.P., Möller, R., Donaldson, L., Putterill, J., and Walter, C. 2006. Towards male sterility in Pinus radiata–a stilbene synthase approach to genetically engineer nuclear male sterility. Plant Biotechnol. J. 4: 333–343.
   PubMed Web of Science ®Google Scholar
• Hoshino, Y., Miyashita, T., and Thomas, T.D. 2011. In vitro culture of endosperm and its application in plant breeding: approaches to polyploidy breeding. Sci. Hort. 130: 1–8.
   Web of Science ®Google Scholar
• Hu, L., Liang, W., Yin, C., Cui, X., Zong, J., Wang, X., Hu, J., and Zhang, D. 2011. Rice MADS3 regulates ROS homeostasis during late anther development. Plant Cell 23: 515–533.
   PubMed Web of Science ®Google Scholar
• Huang, S., Cerny, R.E., Qi, Y., Bhat, D., Aydt, C.M., Hanson, D.D., Malloy, K.P., and Ness, L.A. 2003. Transgenic studies on the involvement of cytokinin and gibberellin in male development. Plant Physiol. 131: 1270–1282.
   PubMed Web of Science ®Google Scholar
• Hüsken, A., Prescher, S., and Schiemann, J. 2010. Evaluating biological containment strategies for pollen-mediated gene flow. Environ. Biosafety Res. 9: 67–73.
   PubMedGoogle Scholar
• Ilinskaya, O.N. and Vamvakas, S. 1997. Nephrotoxic effects of bacterial ribonucleases in the isolated perfused rat kidney. Toxicology 120: 55–63.
   PubMed Web of Science ®Google Scholar
• Ingrosso, I., Bonsegna, S., De Domenico, S., Laddomada, B., Blando, F., Santino, A., and Giovinazzo, G. 2011. Over-expression of a grape stilbene synthase gene in tomato induces parthenocarpy and causes abnormal pollen development. Plant Physiol. Biochem. 49: 1092–1099.
   PubMed Web of Science ®Google Scholar
• Ito, T. and Meyerowitz, E.M. 2000. Overexpression of a cytochrome P450, CYP78A9, induces large and seedless fruit in Arabidopsis. Plant Cell 12: 1541–1550.
   PubMed Web of Science ®Google Scholar
• Justman, M. 2008. Engineered Agriculture. Trend 10: Top 12 Areas for Innovation to 2025, http://www.socialtechnologies.com/FileView.aspx?fileName=PressRelease03102008.pdf
   Google Scholar
• Kandasamy, M.K., Thorsness, M.K., Rundle, S.J., Goldberg, M.L., Nasrallah, J.B., and Nasrallah, M.E. 1993. Ablation of papillar cell function in Brassica flowers results in the loss of stigma receptivity to pollination. Plant Cell 5: 263–275.
   PubMed Web of Science ®Google Scholar
• Kapoor, S. and Takatsuji, H. 2006. Silencing of an anther-specific zincfinger gene, MEZ1, causes aberrant meiosis and pollen abortion in petunia. Plant Mol. Biol. 61: 415–430.
   PubMed Web of Science ®Google Scholar
• Kausch, A.P., Hague, J., Oliver, M.J., Li, Y., Daniell, H., Mascia, P., Watrud, L.S., and Stewart, N. Jr. 2010. Transgenic perennial biofuel feedstocks and strategies for bioconfinement. Biofuels 1: 163–176.
   Google Scholar
• Kempe, K., Rubtsova, M., and Gils, M. 2009. Intein-mediated protein assembly in transgenic wheat: production of active barnase and acetolactate synthase from split genes. Plant Biotechnol. J. 7: 283–297.
   PubMedGoogle Scholar
• Klee, H.J., Horsch, R.B., Hinchee, M.A., Hein, M.B., and Hoffmann, N.L. 1987. The effects of overproduction of two Agrobacterium tumefaciens T-DNA auxin biosynthetic gene products in transgenic petunia plants. Genes Dev. 1: 86–96.
   Web of Science ®Google Scholar
• Koop, H.U., Herz, S., Golds, T.J., and Nickelsen, J. 2007. The genetic transformation of plastids. Top. Curr. Genet. 19: 457–510.
   Google Scholar
• Koop, H.U., Steinmüller, K., Wagner, H., Rössler, C., Eibl, C., and Sacher, L. 1996. Integration of foreign sequences into the tobacco plastome via polyethylene glycol-mediated protoplast transformation. Planta 199: 193–201.
   PubMed Web of Science ®Google Scholar
• Kuvshinov, V., Koivu, K., Kanerva, A., and Pehu, E. 2001. Molecular control of transgene escape from genetically modified plants. Plant Sci. 160: 517–522.
   PubMed Web of Science ®Google Scholar
• Lee, D. and Natesan, E. 2006. Evaluating genetic containment strategies for transgenic plants. Trends Biotechnol. 24: 109–114.
   PubMed Web of Science ®Google Scholar
• Lemmetyinen, J., Pennanen, T., Lannenpaa, M., and Sopanen, T. 2001. Prevention of flower formation in dicotyledons. Mol. Breeding 7: 341–350.
   Web of Science ®Google Scholar
• Leuchtenberger, S., Perz, A., Gatz, C., and Bartsch, J.W. 2001. Conditional cell ablation by stringent tetracycline-dependent regulation of barnase in mammalian cells. Nucleic Acids Res. 29: E76.
   PubMed Web of Science ®Google Scholar
• Li, H., Liang, W., Yin, C., Zhu, L., and Zhang, D. 2011. Genetic interaction of OsMADS3, DROOPING LEAF, and OsMADS13 in specifying rice floral organ identities and meristem determinacy. Plant Physiol. 156: 263–274.
   PubMed Web of Science ®Google Scholar
• Li, R., Jia, X., and Mao, X. 2005. Ethanol-inducible gene expression system and its applications in plant functional genomics. Plant Sci. 169: 463–469.
   Web of Science ®Google Scholar
• Li, Y. 1998. Transgenic seedless fruit and methods. U.S. Patent, . 6, 268, 552.
   Google Scholar
• Li, Y. 2012. Gene deletor: a new tool to address gene flow and food safety concerns over transgenic crop plants. Front. Biol. 7(6): 557–565.
   Google Scholar
• Li, Y., Cheng, Z., Smith, W., Ellis, D., Chen, Y., Zheng, X., Pei, Y., Luo, K., Zhao, D., Yao, Q., Duan, H., and Li, Q. 2004. Invasive ornamental plants: problems, challenges and molecular tools to neutralize their invasiveness. CRC Crit. Rev. Plant Sci. 23: 381–389.
   Web of Science ®Google Scholar
• Li, Y., Duan, H., Chen, Y., and McAvoy, R. 2012. Gene-deletor technology and its potential applications in addressing gene flow and food safety concerns over transgenic plants. In: Plant Gene Containment. pp. 101–112. Oliver, M.J. and Li, Y., Eds., John Wiley & Sons.
   Google Scholar
• Li, Y., Duan, H., and Smith, W. 2007. Gene-deletor: a new tool to address concerns over GE crops. ISB News Report . June.
   Google Scholar
• Li, Y., Wu, Y., Hagen, G., and Guilfoyle, T.J. 1999. Expression of the Auxin-Inducible GH3 Promoter/GUS Fusion Gene as a Useful Molecular Marker for Auxin Physiology. Plant Cell Physiol. 40: 675–682.
   Web of Science ®Google Scholar
• Lin, C., Nie, P., Lu, W., Zhang, Q., Li, J., and Shen, Z. 2010. A selectively terminable transgenic rice line expressing human lactoferrin. Protein Expr. Purif. 74: 60–64.
   PubMed Web of Science ®Google Scholar
• Liu, C., Li, J., Gao, J., Shen, Z., Lu, B.R., and Lin, C. 2012. A built-in mechanism to mitigate the spread of insect-resistance and herbicide-tolerance transgenes into weedy rice populations. PLoS One 7: e31625.
   PubMed Web of Science ®Google Scholar
• Liu, Z. and Liu, Z. 2008. The second intron of AGAMOUS drives carpel- and stamen-specific expression sufficient to induce complete sterility in Arabidopsis. Plant Cell Rep. 27: 855–863.
   PubMed Web of Science ®Google Scholar
• Liu, Z., Zhou, C., and Wu, K. 2008. Creation and analysis of a novel chimeric promoter for the complete containment of pollen- and seed-mediated gene flow. Plant Cell Rep. 27: 995–1004.
   PubMed Web of Science ®Google Scholar
• Lutz, K.A., Azhagiri, A., and Maliga, P. 2011. Transplastomics in Arabidopsis: progress toward developing an efficient method. Methods Mol. Biol. 774:133–147.
   PubMedGoogle Scholar
• Lohmann, J.U. and Weigel, D. 2002. Building beauty: the genetic control of floral patterning. Dev. Cell 2: 135–142.
   PubMed Web of Science ®Google Scholar
• Lohmann, J.U. and Weigel, D. 2004. From tough nuts to touch-me-nots. Cell 116: 763–764.
   PubMed Web of Science ®Google Scholar
• Luo, K., Duan, H., Zhao, D., Zheng, X., Deng, W., Chen, Y., Stewart, C.N. Jr., McAvoy, R., Jiang, X., Wu, Y., He, A., Pei, Y., and Li, Y. 2007. ‘GM-gene-deletor’: fused loxP-FRT recognition sequences dramatically improve the efficiency of FLP or CRE recombinase on transgene excision from pollen and seed of tobacco plants. Plant Biotechnol. J. 5: 263–274.
   PubMed Web of Science ®Google Scholar
• Ma, H. 2005. Molecular genetic analyses of microsporogenesis and microgametogenesis in flowering plants. Annu. Rev. Plant Biol. 56: 393–434.
   PubMed Web of Science ®Google Scholar
• Mahajan, M., Ahuja, P.S., and Yadav, S.K. 2011. Post-transcriptional silencing of flavonol synthase mRNA in tobacco leads to fruits with arrested seed set. PLoS One 6: e28315.
   PubMed Web of Science ®Google Scholar
• Maliga, P. 2004. Plastid transformation in higher plants. Annu. Rev. Plant Biol. 55: 289–313.
   PubMed Web of Science ®Google Scholar
• Maliga, P. and Bock, R. 2011. Plastid biotechnology: food, fuel, and medicine for the 21st century. Plant Physiol. 155: 1501–1510.
   PubMed Web of Science ®Google Scholar
• Mallory-Smith, C. and Zapiola, M. 2008. Gene flow from glyphosate-resistant crops. Pest Manag. Sci. 64: 428–440.
   PubMed Web of Science ®Google Scholar
• Mandel, M.A., Bowman, J.L., Kempin, S.A., Ma, H., Meyerowitz, E.M., and Yanofsky, M.F. 1992. Manipulation of flower structure in transgenic tobacco. Cell 71: 133–143.
   PubMed Web of Science ®Google Scholar
• Mariani, C., De Beuckeleer, M., Truettner, J., Leemans, J., and Goldberg, R.B. 1990. Induction of male sterility in plants by a chimaeric ribonuclease gene. Nature 347: 737–741.
   Web of Science ®Google Scholar
• Martin, W. and Borst, P. 2003. Secondary loss of chloroplasts in trypanosomes. Proc. Natl. Acad. Sci., USA 100: 765–767.
   PubMed Web of Science ®Google Scholar
• Mayer, J. 2005. The golden rice controversy: useless science or unfounded criticism? Bioscience 55: 726–727.
   Web of Science ®Google Scholar
• Messeguer, J. 2003. Gene flow assessment in transgenic plants. Plant Cell, Tissue and Organ Culture 73: 201–212.
   Web of Science ®Google Scholar
• Mitsuda, N., Hiratsu, K., Todaka, D., Nakashima, K., Yamaguchi-Shinozaki, K., and Ohme-Takagi, M. 2006. Efficient production of male and female sterile plants by expression of a chimeric repressor in Arabidopsis and rice. Plant Biotechnol. J. 4: 325–332.
   PubMed Web of Science ®Google Scholar
• Moon, H.S., Li, Y., and Stewart, C.N. Jr. 2010. Keeping the genie in the bottle: transgene biocontainment by excision in pollen. Trends Biotechnol. 28: 3–8.
   PubMed Web of Science ®Google Scholar
• Moose, S.P. and Mumm, R.H. 2008. Molecular plant breeding as the foundation for 21st century crop improvement. Plant Physiol. 147: 969–977.
   PubMed Web of Science ®Google Scholar
• Mourgues, F., Brisset, M.N., and Cheveau, E. 1998. Strategies to improve plant resistance to bacterial diseases through genetic engineering. Trends Biotechnol. 16: 203–210.
   PubMed Web of Science ®Google Scholar
• Muller, B. 2006. Infringing and trespassing plants. Patented seeds at dispute in Canada's courts. Focal Eur. J. Anthropology 48: 83–98.
   Google Scholar
• Nawaz-ul-Rehman, M.S., Mansoor, S., Khan, A.A., Zafar, Y., and Briddon, R.W. 2007. RNAi-mediated male sterility of tobacco by silencing TA29. Mol. Biotechnol. 36: 159–165.
   PubMed Web of Science ®Google Scholar
• Nugent, G.D., Ten Have, M., van der Gulik, A., Dix, P.J., Uijtewaal, B.A., and Mordhorst, A.P. 2005. Plastid transformants of tomato selected using mutations affecting ribosome structure. Plant Cell Rep. 24: 341–349.
   PubMed Web of Science ®Google Scholar
• Oliver, M.J. and Hake, K. 2012. Seed-based gene containment strategies. In: Plant Gene Containment. pp. 113–124. Oliver, M.J. and Li, Y., Eds., John Wiley & Sons.
   Google Scholar
• Oliver, M.J. and Li, Y. 2012. Plant Gene Containment. First edition. Wiley-Blackwell, Malden MA, USA.
   Google Scholar
• Oliver, M.J., Quisenberry, J.E., Trolinder, N.L. G., and Keim, D.L. 1998. Control of plant gene expression. U.S. Patent, . 5, 723, 765.
   Google Scholar
• O’Neill, C., Horváth, G.V., Horváth, E., Dix, P.J., and Medgyesy, P. 1993. Chloroplast transformation in plants: Polyethylene glycol (PEG) treatment of protoplasts is an alternative to biolistic delivery systems. Plant J. 3: 729–738.
   PubMed Web of Science ®Google Scholar
• Pandolfini, T., Molesini, B., and Spena, A. 2007. Molecular dissection of the role of auxin in fruit initiation. Trends Plant Sci. 12: 327–329.
   PubMed Web of Science ®Google Scholar
• Park, J.H., Halitschke, R., Kim, H.B., Baldwin, I.T., Feldmann, K.A., and Feyereisen, R. 2002. A knock-out mutation in allene oxide synthase results in male sterility and defective wound signal transduction in Arabidopsis due to a block in jasmonic acid biosynthesis. Plant J. 31: 1–12.
   PubMed Web of Science ®Google Scholar
• Plackett, A.R., Thomas, S.G., Wilson, Z.A., and Hedden, P. 2011. Gibberellin control of stamen development: a fertile field. Trends Plant Sci. 16: 568–578.
   PubMed Web of Science ®Google Scholar
• Pnueli, L., Hareven, D., Rounsley, S.D., Yanofsky, M.F., and Lifschitz, E. 1994. Isolation of the tomato AGAMOUS gene TAG1 and analysis of its homeotic role in transgenic plants. Plant Cell 6: 163–173.
   PubMed Web of Science ®Google Scholar
• Prior, T.I., Kunwar, S., and Pastan, I. 1996. Studies on the activity of barnase toxins. Bioconjug. Chem. 7: 23–29.
   PubMed Web of Science ®Google Scholar
• Raghu, S., Anderson, R.C., Daehler, C.C., Davis A.S., Wiedenmann, R.N., Simberloff, D., and Mack, R.N. 2006. Ecology. Adding biofuels to the invasive species fire? Science 313: 1742–1743.
   PubMed Web of Science ®Google Scholar
• Ramos, H.J. O. 2005. A new system to control the barnase expression by a NifA-dependent promoter. J. Biotechnol. 118: 9–16.
   PubMed Web of Science ®Google Scholar
• Reguera, M., Peleg, Z., and Blumwald, E. 2012. Targeting metabolic pathways for genetic engineering abiotic stress-tolerance in crops. Biochim. Biophys. Acta 1819: 186–194.
   PubMed Web of Science ®Google Scholar
• Rigano, M.M., Scotti, N., and Cardi, T. 2012. Unsolved problems in plastid transformation. Bioengineered 3: 329–333.
   PubMed Web of Science ®Google Scholar
• Rotino, G.L., Perri, E., Zottini, M., Sommer, H., and Spena, A. 1997. Genetic engineering of parthenocarpic plants. Nat. Biotechnol. 15: 1398–1401.
   PubMed Web of Science ®Google Scholar
• Ruan, Y.L., Patrick, J.W., Bouzayen, M., Osorio, S., and Fernie, A.R. 2012. Molecular regulation of seed and fruit set. Trends Plant Sci. 17: 656–665.
   PubMed Web of Science ®Google Scholar
• Ruf, S., Hermann, M., Berger, I.J., Carrer, H., and Bock, R. 2001. Stable genetic transformation of tomato plastids and expression of a foreign protein in fruit. Nat. Biotechnol. 19: 870–875.
   PubMed Web of Science ®Google Scholar
• Ruf, S., Karcher, D., and Bock, R. 2007. Determining the transgene containment level provided by chloroplast transformation. Proc. Natl. Acad. Sci. USA 104: 6998–7002.
   PubMed Web of Science ®Google Scholar
• Ruiz, O.N. and Daniell, H. 2005. Engineering cytoplasmic male sterility via the chloroplast genome by expression of β-ketothiolase. Plant Physiol. 138: 1232–1246.
   PubMed Web of Science ®Google Scholar
• Sanders, P.M., Lee, P.Y., Biesgen, C., Boone, J.D., Beals, T.P., Weiler, E.W., and Goldberg, R.B. 2000. The Arabidopsis DELAYED DEHISCENCE1 gene encodes an enzyme in the jasmonic acid synthesis pathway. Plant Cell 12: 1041–1061.
   PubMed Web of Science ®Google Scholar
• Sauer, B. 1992. Identification of cryptic lox sites in the yeast genome by selection for Cre-mediated chromosome translocations that confer multiple drug resistance. J. Mol. Biol. 223: 911–928.
   PubMed Web of Science ®Google Scholar
• Schmülling, T., Röhrig, H., Pilz, S., Walden, R., and Schell, J. 1993. Restoration of fertility by antisense RNA in genetically engineered male sterile tobacco plants. Mol. Gen. Genet. 237: 385–394.
   PubMedGoogle Scholar
• Schnable, P.S. and Wise, R.P. 1998. The molecular basis of cytoplasmic male sterility. Trends Plant Sci. 3: 175–180.
   Web of Science ®Google Scholar
• Scotti, N., Valkov, V.T., and Cardi, T. 2011. Improvement of plastid transformation efficiency in potato by using vectors with homologous flanking sequences. GM Crops 2: 89–91.
   PubMedGoogle Scholar
• Senaratna, T. 1992. Artificial Seeds. Biotechnol. Adv. 10: 379–392.
   PubMed Web of Science ®Google Scholar
• Shand, H. 2002. Terminator no solution to gene flow. Nat. Biotechnol. 20: 775–776.
   PubMed Web of Science ®Google Scholar
• Sharma, K.K., Bhatnagar, P., and Thorpe, T.A. 2005. Genetic transformation technology: status and problems. In Vitro Cell Dev. Biol. Plant 41: 102–112.
   Web of Science ®Google Scholar
• Sidorov, V.A., Kasten, D., Pang, S.Z., Hajdukiewicz, P.T., Staub, J.M., and Nehra, N.S. 1999. Technical advance: stable chloroplast transformation in potato: use of green fluorescent protein as a plastid marker. Plant J. 19: 209–216.
   PubMed Web of Science ®Google Scholar
• Sieburth, L.E. and Meyerowitz, E.M. 1997. Molecular dissection of the AGAMOUS control region shows that cis elements for spatial regulation are located intragenically. Plant Cell 9: 355–365.
   PubMed Web of Science ®Google Scholar
• Srivastava, V. and Ow, D.W. 2003. Rare instances of Cre-mediated deletion product maintained in transgenic wheat. Plant Mol. Biol. 52: 661–668.
   PubMed Web of Science ®Google Scholar
• Stegemann, S., Hartmann, S., Ruf, S., and Bock, R. 2003. High-frequency gene transfer from the chloroplast genome to the nucleus. Proc. Natl. Acad. Sci. USA 100: 8828–8833.
   PubMed Web of Science ®Google Scholar
• Stevens, R., Grelon, M., Vezon, D., Oh, J., Meyer, P., Perennes, C., Domenichini, S., and Bergounioux, C. 2004. A CDC45 homolog in Arabidopsis is essential for meiosis, as shown by RNA interference-induced gene silencing. Plant Cell 16: 99–113.
   PubMed Web of Science ®Google Scholar
• Stewart, C.N. Jr. 2007. Biofuels and biocontainment. Nat. Biotechnol. 25: 283–284.
   PubMed Web of Science ®Google Scholar
• Stewart, C.N. Jr., Halfhill, M.D., and Warwick, S.I. 2003. Transgene introgression from genetically modified crops to their wild relatives. Nat. Rev. Genet. 4: 806–817.
   PubMed Web of Science ®Google Scholar
• Svab, Z., Hajdukiewicz, P., and Maliga, P. 1990. Stable transformation of plastids in higher plants. Proc. Natl. Acad. Sci. USA 87: 8526–8530.
   PubMed Web of Science ®Google Scholar
• Svab, Z. and Maliga, P. 1993. High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene. Proc. Natl. Acad. Sci. USA 90: 913–917.
   PubMed Web of Science ®Google Scholar
• Tester, M. and Langridge, P. 2010. Breeding technologies to increase crop production in a changing world. Science 327: 818–822.
   PubMed Web of Science ®Google Scholar
• Thammina, C., He, M., Lu, L., Cao, K., Yu, H., Chen, Y., Tian, L., Chen, J., McAvoy, R., Ellis, D., Zhao, D., Wang, Y., Zhang, X., and Li, Y. 2011a. In vitro regeneration of triploid plants of Euonymus alatus ‘Compactus’ (burning bush) from endosperm tissues. HortScience 46: 1141–1147.
   Web of Science ®Google Scholar
• Thammina, C., He, M., Yu, H., Chen, Y., Gai, Y., Cao, K., Lu, L., Zhao, D., Wang, Y., McAvoy, R., Ellis, D., and Li, Y. 2011b. Continuous biosynthesis of abscisic acid (ABA) may be required for maintaining dormancy of isolated embryos and intact seeds of Euonymus alatus. Plant Cell, Tissue and Organ Culture 106: 493–500.
   Google Scholar
• Thorsness, M.K., Kandasamy, M.K., Nasrallah, M.E., and Nasrallah, J.B. 1991. A Brassica S-locus gene promoter targets toxic gene expression and cell death to the pistil and pollen of transgenic Nicotiana. Dev. Biol. 143: 173–184.
   PubMed Web of Science ®Google Scholar
• Toppino, L., Kooiker, M., Lindner, M., Dreni, L., Rotino, G.L., and Kater, M.M. 2011. Reversible male sterility in eggplant (Solanum melongena L.) by artificial microRNA-mediated silencing of general transcription factor genes. Plant Biotechnol. J. 9: 684–692.
   PubMed Web of Science ®Google Scholar
• Tovkach, A., Zeevi, V., and Tzfira, T. 2009. A toolbox and procedural notes for characterizing novel zinc finger nucleases for genome editing in plant cells. Plant J. 57: 747–757.
   PubMed Web of Science ®Google Scholar
• Tsuchiya, T., Toriyama, K., Yoshikawa, M., Ejiri, S., and Hinata, K. 1995. Tapetum-specific expression of the gene for an endo-beta-1,3-glucanase causes male sterility in transgenic tobacco. Plant Cell Physiol. 36: 487–494.
   PubMed Web of Science ®Google Scholar
• Ueguchi-Tanaka, M., Hirano, K., Hasegawa, Y., Kitano, H., and Matsuoka, M. 2008. Release of the repressive activity of rice DELLA protein SLR1 by gibberellin does not require SLR1 degradation in the gid2 mutant. Plant Cell 20: 2437–2446.
   PubMed Web of Science ®Google Scholar
• van Bel, A.J., Hibberd, J., Prüfer, D., and Knoblauch, M. 2001. Novel approach in plastid transformation. Curr. Opin. Biotechnol. 12: 144–149.
   PubMed Web of Science ®Google Scholar
• van der Meer, I.M., Stam, M.E., van Tunen, A.J., Mol, J.N., and Stuitje, A.R. 1992. Antisense inhibition of flavonoid biosynthesis in petunia anthers results in male sterility. Plant Cell 4: 253–262.
   PubMed Web of Science ®Google Scholar
• van Tunen, A.J., Koes, R.E., Spelt, C.E., van der Krol, A.R., Stuitje, A.R., and Mol, J.N. 1988. Cloning of the two chalcone flavanone isomerase genes from Petunia hybrida: coordinate, light-regulated and differential expression of flavonoid genes. EMBO J. 7: 1257–1263.
   PubMed Web of Science ®Google Scholar
• Varoquaux, F., Blanvillain, R., Delseny, M., and Gallois, P. 2002. Less is better: new approaches for seedless fruit production. Trends Biotechnol. 18: 233–242.
   Web of Science ®Google Scholar
• Wang, H., Jones, B., Li, Z., Frasse, P., Delalande, C., Regad, F., Chaabouni, S., Latché, A., Pech, J.C., and Bouzayen, M. 2005. The tomato Aux/IAA transcription factor IAA9 is involved in fruit development and leaf morphogenesis. Plant Cell 17: 2676–2692.
   PubMed Web of Science ®Google Scholar
• Wang, H.H., Yin, W.B., and Hu, Z.M. 2009. Advances in chloroplast engineering. J. Genet. Genomics 36: 387–398.
   PubMed Web of Science ®Google Scholar
• Wang, X., Singer, S.D., and Liu, Z. 2012. Silencing of meiosis-critical genes for engineering male sterility in plants. Plant Cell Rep. 31: 747–756.
   PubMed Web of Science ®Google Scholar
• Warwick, S.I., Beckie, H.J., and Hall, L.M. 2009. Gene flow, invasiveness, and ecological impact of genetically modified crops. Ann. N. Y. Acad. Sci. 1168: 72–99.
   PubMed Web of Science ®Google Scholar
• Wasternack, C., Forner, S., Strnad, M., and Hause, B. 2012. Jasmonates in flower and seed development. Biochimie (online). doi: 10.1016/j.biochi.2012.06.005
   Google Scholar
• Wei, H., Meilan, R., Brunner, A.M., Skinner, J.S., Ma, C., and Strauss, S.H. 2006. Transgenic sterility in Populus: expression properties of the poplar PTLF, Agrobacterium NOS and two minimal 35S promoters in vegetative tissues. Tree Physiol. 26: 401–410.
   PubMed Web of Science ®Google Scholar
• Weigel, D. and Meyerowitz, E.M. 1994. The ABCs of floral homeotic genes. Cell 78: 203–209.
   PubMed Web of Science ®Google Scholar
• Worrall, D., Hird, D.L., Hodge, R., Paul, W., Draper, J., and Scott, R. 1992. Premature dissolution of the microsporocyte callose wall causes male sterility in transgenic tobacco. Plant Cell 4: 759–771.
   PubMed Web of Science ®Google Scholar
• Wurbs, D., Ruf, S., and Bock, R. 2007. Contained metabolic engineering in tomatoes by expression of carotenoid biosynthesis genes from the plastid genome. Plant J. 49: 276–288.
   PubMed Web of Science ®Google Scholar
• Yang, Y., Singer, S.D., and Liu. Z. 2010. Two similar but distinct second intron fragments from tobacco AGAMOUS homologs confer identical floral organ-specific expression sufficient for generating complete sterility in plants. Planta 231: 1159–1169.
   PubMed Web of Science ®Google Scholar
• Yang, Y., Singer, S.D., and Liu. Z. 2011. Petunia AGAMOUS enhancer-derived chimeric promoters specify a carpel-, stamen-, and petal-specific expression pattern sufficient for engineering male and female sterility in tobacco. Plant Mol. Biol. Rep. 29: 162–170.
   Web of Science ®Google Scholar
• Yao, J., Dong, Y., and Morris, B.A. 2001. Parthenocarpic apple fruit production conferred by transposon insertion mutations in a MADS-box transcription factor. Proc. Natl. Acad. Sci. USA 98: 1306–1311.
   PubMed Web of Science ®Google Scholar
• Yui, R., Iketani, S., Mikami, T., and Kubo, T. 2003. Antisense inhibition of mitochondrial pyruvate dehydrogenase E1a subunit in anther tapetum causes male sterility. Plant J. 34: 57–66.
   PubMed Web of Science ®Google Scholar
• Zheng, X., Deng, W., Luo, K., Duan, H., Chen, Y. McAvoy, R., Song, S., Pei, Y., and Li, Y. 2007. The cauliflower mosaic virus (CaMV) 35S promoter sequence alters the level and patterns of activity of adjacent tissue- and organ-specific gene promoters. Plant Cell Rep. 26: 1195–1203.
   PubMed Web of Science ®Google Scholar
• Zik, M. and Irish, V.F. 2003. Flower development: Initiation, differentiation, and diversification. Annu. Rev. Cell Dev. Biol. 19: 119–140.
   PubMed Web of Science ®Google Scholar