In Pursuit of Ecosystem-Based Management for Narragansett Bay: An Overview of Previous Models and Roadmap for Future Research

References

• Abdelrhman, M. A. 2005. Simplified modeling of flushing and residence times in 42 embayments in New England, USA, with special attention to Greenwich Bay, Rhode Island. Estuarine, Coastal and Shelf Science 62 (1–2):339–51. doi: https://doi.org/10.1016/j.ecss.2004.09.021.
   Web of Science ®Google Scholar
• Abdelrhman, M. A. 2007. Embayment characteristic time and biology via tidal prism model. Estuarine, Coastal and Shelf Science 74 (4):742–55. doi: https://doi.org/10.1016/j.ecss.2007.05.008.
   Web of Science ®Google Scholar
• Abdelrhman, M. A. 2016. Modeling water clarity and light quality in oceans. Journal of Marine Science and Engineering 4 (4):80. doi: https://doi.org/10.3390/jmse4040080.
   Web of Science ®Google Scholar
• Abdelrhman, M. A. 2017. Quantifying contributions to light attenuation in estuaries and coastal embayments: Application to Narragansett Bay, Rhode Island. Estuaries and Coasts 40 (4):994–1012. doi: https://doi.org/10.1007/s12237-016-0206-x.
   PubMed Web of Science ®Google Scholar
• Abdelrhman, M. A., and G. Cicchetti. 2012. Relationships between nutrient enrichment and benthic function: Local effects and spatial patterns. Estuaries and Coasts 35 (1):47–59. doi: https://doi.org/10.1007/s12237-011-9418-2.
   Web of Science ®Google Scholar
• Álvarez-Romero, J. G., S. N. Wilkinson, R. L. Pressey, N. C. Ban, J. Kool, and J. Brodie. 2014. Modeling catchment nutrients and sediment loads to inform regional management of water quality in coastal-marine ecosystems: A comparison of two approaches. Journal of Environmental Management 146:164–78. doi: https://doi.org/10.1016/j.jenvman.2014.07.007.
   PubMed Web of Science ®Google Scholar
• An, L. 2012. Modeling human decisions in coupled human and natural systems: Review of agent-based models. Ecological Modelling 229:25–36. doi: https://doi.org/10.1016/j.ecolmodel.2011.07.010.
   Web of Science ®Google Scholar
• Anstead, K. A., K. Drew, D. Chagaris, A. M. Schueller, J. E. McNamee, A. Buchheister, G. Nesslage, J. H. Uphoff Jr., M. J. Wilberg, A. Sharov, et al. 2021. The path to an ecosystem approach for forage fish management: A case study of Atlantic menhaden. Frontiers in Marine Science 8:491. doi: https://doi.org/10.3389/fmars.2021.607657.
   Web of Science ®Google Scholar
• Arkema, K. K., S. C. Abramson, and B. M. Dewsbury. 2006. Marine ecosystem based management: From characterization to implementation. Frontiers in Ecology and the Environment 4 (10):525–32. doi: https://doi.org/10.1890/1540-9295(2006)4[525:MEMFCT.2.0.CO;2]
   Web of Science ®Google Scholar
• Arlinghaus, R., J. Alós, B. Beardmore, K. Daedlow, M. Dorow, M. Fujitani, D. Hühn, W. Haider, L. M. Hunt, B. M. Johnson, et al. 2017. Understanding and managing freshwater recreational fisheries as complex adaptive social-ecological systems. Reviews in Fisheries Science & Aquaculture 25 (1):1–41. doi: https://doi.org/10.1080/23308249.2016.1209160.
   Web of Science ®Google Scholar
• Arlinghaus, R., S. J. Cooke, and W. Potts. 2013. Towards resilient recreational fisheries on a global scale through improved understanding of fish and fisher behaviour. Fisheries Management and Ecology 20 (2–3):91–8. doi: https://doi.org/10.1111/fme.12027.
   Web of Science ®Google Scholar
• Bailey, R. M., E. Carrella, R. Axtell, M. G. Burgess, R. B. Cabral, M. Drexler, C. Dorsett, J. K. Madsen, A. Merkl, S. Saul, et al. 2019. A computational approach to managing coupled human–environmental systems: The POSEIDON model of ocean fisheries. Sustainability Science 14 (2):259–75. doi: https://doi.org/10.1007/s11625-018-0579-9.
   Web of Science ®Google Scholar
• Berkes, F. 2012. Implementing ecosystem-based management: Evolution or revolution? Fish and Fisheries 13 (4):465–76. doi: https://doi.org/10.1111/j.1467-2979.2011.00452.x.
   Web of Science ®Google Scholar
• Berounsky, V. M., and S. W. Nixon. 1993. Rates of nitrification along an estuarine gradient in Narragansett Bay. Estuaries 16 (4):718–30. doi: https://doi.org/10.2307/1352430.
   Google Scholar
• Boothroyd, J. C., and P. V. August. 2008. Geologic and contemporary landscapes of the Narragansett Bay ecosystem. In Science for ecosystem-based management: Narragansett Bay in the 21st century, edited by A. Desbonnet and B. Costa-Pierce, 1–34. New York: Springer Science.
   Google Scholar
• Borkman, D. G., and T. J. Smayda. 2016. Coincident patterns of waste water suspended solids reduction, water transparency increase and chlorophyll decline in Narragansett Bay. Marine Pollution Bulletin 107 (1):161–9. doi: https://doi.org/10.1016/j.marpolbul.2016.04.004.
   PubMed Web of Science ®Google Scholar
• Boumans, R., J. Roman, I. Altman, and L. Kaufman. 2015. The multiscale integrated model of ecosystem services (MIMES): Simulating the interactions of coupled human and natural systems. Ecosystem Services 12:30–41. doi: https://doi.org/10.1016/j.ecoser.2015.01.004.
   Web of Science ®Google Scholar
• Brander, K. 2015. Improving the reliability of fishery predictions under climate change. Current Climate Change Reports 1 (1):40–8. doi: https://doi.org/10.1007/s40641-015-0005-7.
   Web of Science ®Google Scholar
• Brawley, J. W., M. J. Brush, J. N. Kremer, and S. W. Nixon. 2003. Potential applications of an empirical phytoplankton production model to shallow water ecosystems. Ecological Modelling 160 (1–2):55–61. doi: https://doi.org/10.1016/S0304-3800(02)00310-1.
   Web of Science ®Google Scholar
• Brush, M. J., and J. W. Brawley. 2009. Adapting the light · biomass (BZI) models of phytoplankton primary production to shallow marine ecosystems. Journal of Marine Systems 75 (1–2):227–35. doi: https://doi.org/10.1016/j.jmarsys.2008.10.003.
   Web of Science ®Google Scholar
• Brush, M. J., and S. W. Nixon. 2010. Modeling the role of macroalgae in a shallow sub-estuary of Narragansett Bay, RI (USA). Ecological Modelling 221 (7):1065–79. doi: https://doi.org/10.1016/j.ecolmodel.2009.11.002.
   Web of Science ®Google Scholar
• Brush, M. J., and S. W. Nixon. 2017. A reduced complexity, hybrid empirical-mechanistic model of eutrophication and hypoxia in shallow marine ecosystems. In Modeling coastal hypoxia, edited by D. Justic, K. Rose, R. Hetland, and K. Fennel, 61–93. Cham: Springer.
   Google Scholar
• Brush, M. J., J. W. Brawley, S. W. Nixon, and J. N. Kremer. 2002. Modeling phytoplankton production: Problems with the Eppley curve and an empirical alternative. Marine Ecology Progress Series 238:31–45. doi: https://doi.org/10.3354/meps238031.
   Web of Science ®Google Scholar
• Buchheister, A., T. J. Miller, and E. D. Houde. 2017. Evaluating ecosystem-based reference points for Atlantic Menhaden. Marine and Coastal Fisheries 9 (1):457–78. doi: https://doi.org/10.1080/19425120.2017.1360420.
   Web of Science ®Google Scholar
• Busch, J. 2009. Surfer and beachgoer responsiveness to coastal water quality warnings. Coastal Management 37 (6):529–49. doi: https://doi.org/10.1080/08920750903044865.
   Web of Science ®Google Scholar
• Byron, C. J., D. Jin, and T. M. Dalton. 2015. An integrated ecological-economic modeling framework for the sustainable management of oyster farming. Aquaculture 447:15–22. doi: https://doi.org/10.1016/j.aquaculture.2014.08.030.
   Web of Science ®Google Scholar
• Byron, C. J., J. Link, B. Costa-Pierce, and D. Bengtson. 2011. Calculating ecological carrying capacity of shellfish aquaculture using mass-balance modeling: Narragansett Bay, Rhode Island. Ecological Modelling 222 (10):1743–55. doi: https://doi.org/10.1016/j.ecolmodel.2011.03.010.
   Web of Science ®Google Scholar
• Chagaris, D., K. Drew, A. Schueller, M. Cieri, J. Brito, and A. Buchheister. 2020. Ecological reference points for Atlantic menhaden established using an ecosystem model of intermediate complexity. Frontiers in Marine Science 7:1043. doi: https://doi.org/10.3389/fmars.2020.606417.
   Web of Science ®Google Scholar
• Chinman, R. A., and S. W. Nixon. 1985. Depth-area-volume relationships in Narragansett Bay. NOAA/Sea Grant Marine Technical Report 87. Narragansett, RI.
   Google Scholar
• Christensen, V., and C. J. Walters. 2004. Ecopath with Ecosim: Methods, capabilities and limitations. Ecological Modelling 172 (2–4):109–39. doi: https://doi.org/10.1016/j.ecolmodel.2003.09.003.
   Web of Science ®Google Scholar
• Christensen, V., and C. J. Walters. 2005. Using ecosystem modeling for fisheries management: Where are we. ICES CM 1000 (19): 1–16.
   Google Scholar
• Christensen, V., and D. Pauly. 1992. ECOPATH II—A software for balancing steady-state ecosystem models and calculating network characteristics. Ecological Modelling 61 (3–4):169–85. doi: https://doi.org/10.1016/0304-3800(92)90016-8.
   Web of Science ®Google Scholar
• Cline, T. J., D. E. Schindler, and R. Hilborn. 2017. Fisheries portfolio diversification and turnover buffer Alaskan fishing communities from abrupt resource and market changes. Nature Communications 8:14042–7. doi: https://doi.org/10.1038/ncomms14042.
   PubMed Web of Science ®Google Scholar
• Collie, J. S., A. D. Wood, and H. P. Jeffries. 2008. Long-term shifts in the species composition of a coastal fish community. Canadian Journal of Fisheries and Aquatic Sciences 65 (7):1352–65. doi: https://doi.org/10.1139/F08-048.
   Web of Science ®Google Scholar
• Cox, M. A., M. Haas, and H. Markey. 2018. Changes in Narragansett Bay. In Proceedings of the 2017 Ronald C. Baird Sea Grant Science Symposium, edited by M. A. Cox, 17. Narragansett, RI: University of Rhode Island.
   Google Scholar
• Daily, G. C., S. Polasky, J. Goldstein, P. M. Kareiva, H. A. Mooney, L. Pejchar, T. H. Ricketts, J. Salzman, and R. Shallenberger. 2009. Ecosystem services in decision making: Time to deliver. Frontiers in Ecology and the Environment 7 (1):21–8. doi: https://doi.org/10.1890/080025.
   Web of Science ®Google Scholar
• Dalton, T., and R. Thompson. 2013. Recreational boaters’ perceptions of scenic value in Rhode Island coastal waters. Ocean & Coastal Management 71:99–107. doi: https://doi.org/10.1016/j.ocecoaman.2012.10.002.
   Web of Science ®Google Scholar
• Dalton, T., R. Thompson, and D. Jin. 2010. Mapping human dimensions in marine spatial planning and management: An example from Narragansett Bay, Rhode Island. Marine Policy 34 (2):309–19. doi: https://doi.org/10.1016/j.marpol.2009.08.001.
   Web of Science ®Google Scholar
• Desbonnet, A., and V. Lee. 1991. Historical trends: Water quality and fisheries, Narragansett Bay. The University of Rhode Island Coastal Resources Center Contribution No. 100 and National Sea Grant Publication #RIU-T-90-001. Narragansett, RI.
   Google Scholar
• Doering, P. H., and C. A. Oviatt. 1986. Application of filtration rate models to field populations of bivalves: An assessment using experimental mesocosms. Marine Ecology Progress Series 31:265–75. doi: https://doi.org/10.3354/meps031265.
   Web of Science ®Google Scholar
• Dreyfus-León, M. J. 1999. Individual-based modelling of fishermen search behaviour with neural networks and reinforcement learning. Ecological Modelling 120:287–97.
   Web of Science ®Google Scholar
• Durbin, A. G., and E. G. Durbin. 1998. Effects of menhaden predation on plankton populations in Narragansett Bay, Rhode Island. Estuaries 21 (3):449–65. doi: https://doi.org/10.2307/1352843.
   Google Scholar
• Elliott, M., and A. K. Whitfield. 2011. Challenging paradigms in estuarine ecology and management. Estuarine, Coastal and Shelf Science, 94 (4):306–314.
   Google Scholar
• Fiksel, J., R. Bruins, A. Gatchett, A. Gilliland, and M. T. Brink. 2014. The triple value model: A systems approach to sustainable solutions. Clean Technologies and Environmental Policy 16:691–702.
   Web of Science ®Google Scholar
• Frank, K. T., B. Petrie, L. Nancy, and N. L. Shackell. 2007. The ups and downs of trophic control in continental shelf ecosystems. Trends in Ecology & Evolution 22 (5):236–42. doi: https://doi.org/10.1016/j.tree.2007.03.002.
   PubMed Web of Science ®Google Scholar
• Fulton, E. A. 2010. Approaches to end-to-end ecosystem models. Journal of Marine Systems 81 (1–2):171–83. doi: https://doi.org/10.1016/j.jmarsys.2009.12.012.
   Web of Science ®Google Scholar
• Fulton, E. A., A. D. M. Smith, D. C. Smith, and I. E. Van Putten. 2011. Human behaviour: The key source of uncertainty in fisheries management. Fish and Fisheries 12 (1):2–17. doi: https://doi.org/10.1111/j.1467-2979.2010.00371.x.
   Web of Science ®Google Scholar
• Fulweiler, R. W., A. J. Oczkowski, K. M. Miller, C. A. Oviatt, and M. E. Q. Pilson. 2015. Whole truths vs. half truths - And a search for clarity in long-term water temperature records. Estuarine, Coastal and Shelf Science 157:A1–A6. doi: https://doi.org/10.1016/j.ecss.2015.01.021.
   Web of Science ®Google Scholar
• Fulweiler, R. W., and S. W. Nixon. 2009. Responses of benthic-pelagic coupling to climate change in a temperate estuary. In Eutrophication in coastal ecosystems, edited by J. H. Anderson and D. J. Conley, 147–56. Dordrecht: Springer.
   Google Scholar
• Gao, H., and A. Hailu. 2013. Identifying preferred management options: An integrated agent-based recreational fishing simulation model with an AHP-TOPSIS evaluation method. Ecological Modelling 249:75–83. doi: https://doi.org/10.1016/j.ecolmodel.2012.07.002.
   Web of Science ®Google Scholar
• Haasnoot, M., J. H. Kwakkel, W. E. Walker, and J. ter Maat. 2013. Dynamic adaptive policy pathways: A method for crafting robust decisions for a deeply uncertain world. Global Environmental Change 23 (2):485–98. doi: https://doi.org/10.1016/j.gloenvcha.2012.12.006.
   Web of Science ®Google Scholar
• Hamburg, S. P., Pryor, D., and M. A. Vadeboncoeur. 2008. Nitrogen inputs to Narragansett Bay: An historical perspective. In Science for Ecosystem-based Management (pp. 177–210). Springer, New York, NY.
   Google Scholar
• Hamel, K., K. Lacasse, and T. Dalton. 2021. Recreational users’ perceptions of coastal water quality in Rhode Island (USA): Implications for policy development and management. Marine Pollution Bulletin 172:112810. doi: https://doi.org/10.1016/j.marpolbul.2021.112810.
   PubMed Web of Science ®Google Scholar
• Herndon, R. W., and E. W. Sekatau. 1997. The right to a name: The Narragansett people and Rhode Island officials in the revolutionary era. Ethnohistory 433–462.
   Google Scholar
• Holland, D. S., and J. G. Sutinen. 1999. An empirical model of fleet dynamics in New England trawl fisheries. Canadian Journal of Fisheries and Aquatic Sciences 56 (2):253–64. doi: https://doi.org/10.1139/f98-169.
   Web of Science ®Google Scholar
• Hollowed, A. B., K. K. Holsman, A. C. Haynie, A. J. Hermann, A. E. Punt, K. Aydin, et al. 2020. Integrated modeling to evaluate climate change impacts on coupled social-ecological systems in Alaska. Frontiers in Marine Science 14 (6):775.
   Google Scholar
• Hunt, G. L., and S. McKinnell. 2006. Interplay between top-down, bottom-up, and wasp-waist control in marine ecosystems. Progress in Oceanography 68 (2–4):115–24. doi: https://doi.org/10.1016/j.pocean.2006.02.008.
   Web of Science ®Google Scholar
• Innes-Gold, A., M. Heinichen, K. Gorospe, C. Truesdale, J. Collie, and A. Humphries. 2020. Modeling 25 years of food web changes in Narragansett Bay as a tool for ecosystem-based management. Marine Ecology Progress Series 654:17–33. doi: https://doi.org/10.3354/meps13505.
   Web of Science ®Google Scholar
• Innes-Gold, A., T. Pavlowich, M. Heinichen, M. C. McManus, J. McNamee, J. Collie, and A. Humphries. 2021. Exploring social-ecological trade-offs in fisheries using a coupled food web and human behavior model. Ecology and Society 26 (2):40. doi: https://doi.org/10.5751/ES-12451-260240.
   Web of Science ®Google Scholar
• Ji, Z. G. 2017. Hydrodynamics and water quality: Modeling rivers, lakes, and estuaries. Hoboken: Wiley.
   Google Scholar
• Kaplan, I. C., T. B. Francis, A. E. Punt, L. E. Koehn, E. Curchitser, F. Hurtado-Ferro, K. F. Johnson, S. E. Lluch-Cota, W. J. Sydeman, T. E. Essington, et al. 2019. A multi-model approach to understanding the role of Pacific sardine in the California Current food web. Marine Ecology Progress Series 617–618:307–21. doi: https://doi.org/10.3354/meps12504.
   Web of Science ®Google Scholar
• Kincaid, C., D. L. Bergondo, and K. Rosenberger. 2008. The dynamics of water exchange between Narragansett Bay and Rhode Island sound. In Science for ecosystem-based management: Narragansett Bay in the 21st century, edited by A. Desbonnet and B. A. Costa-Pierce. New York: Springer Science; 301–24.
   Google Scholar
• Kremer, J. N., and P. Kremer. 1982. A three-trophic level estuarine model: Synergism of two mechanistic simulations. Ecological Modelling 15 (2):145–57. doi: https://doi.org/10.1016/0304-3800(82)90058-8.
   Web of Science ®Google Scholar
• Kremer, J. N., and S. W. Nixon. 1978. A coastal marine ecosystem: Simulation and analysis. Berlin: Springer-Verlag.
   Google Scholar
• Kremer, J. N., J. M. P. Vaudrey, D. S. Ullman, D. L. Bergondo, N. LaSota, C. Kincaid, D. L. Codiga, and M. J. Brush. 2010. Simulating property exchange in estuarine ecosystem models at ecologically appropriate scales. Ecological Modelling 221 (7):1080–8. doi: https://doi.org/10.1016/j.ecolmodel.2009.12.014.
   Web of Science ®Google Scholar
• Latour, R. J., M. J. Brush, and C. F. Bonzek. 2003. Toward ecosystem-based fisheries management: Strategies for multispecies modeling and associated data requirements. Fisheries 28 (9):10–22. doi: https://doi.org/10.1577/1548-8446(2003)28[10:TEFM.2.0.CO;2]
   Web of Science ®Google Scholar
• Lempert, R. J., and M. E. Schlesinger. 2000. Robust strategies for abating climate change. Climatic Change 45 (3/4):387–401. doi: https://doi.org/10.1023/A:1005698407365.
   Web of Science ®Google Scholar
• Levin, S. A., and J. Lubchenco. 2008. Resilience, robustness, and marine ecosystem-based management. BioScience 58 (1):27–32. doi: https://doi.org/10.1641/B580107.
   Web of Science ®Google Scholar
• Link, J. S., and H. I. Browman. 2014. Integrating what? Levels of marine ecosystem-based assessment and management. ICES Journal of Marine Science 71 (5):1170–3. doi: https://doi.org/10.1093/icesjms/fsu026.
   Web of Science ®Google Scholar
• Link, J. S., E. A. Fulton, and R. J. Gamble. 2010. The northeast US application of ATLANTIS: A full system model exploring marine ecosystem dynamics in a living marine resource management context. Progress in Oceanography 87 (1–4):214–34. doi: https://doi.org/10.1016/j.pocean.2010.09.020.
   Web of Science ®Google Scholar
• Link, J. S., T. F. Ihde, C. J. Harvey, S. K. Gaichas, J. C. Field, J. K. T. Brodziak, H. M. Townsend, and R. M. Peterman. 2012. Dealing with uncertainty in ecosystem models: The paradox of use for living marine resource management. Progress in Oceanography 102:102–14. doi: https://doi.org/10.1016/j.pocean.2012.03.008.
   Web of Science ®Google Scholar
• Lord, P. 2008. Limit aquaculture to 5 percent R.I. waters, experts say. Providence Journal.
   Google Scholar
• Lotze, H. K., H. S. Lenihan, B. J. Bourque, R. H. Bradbury, R. G. Cooke, M. C. Kay, S. M. Kidwell, M. X. Kirby, C. H. Peterson, and J. B. C. Jackson. 2006. Depletion, degradation, and recovery potential of estuaries and coastal seas. Science (New York, N.Y.) 312 (5781):1806–9. doi: https://doi.org/10.1126/science.1128035.
   PubMed Web of Science ®Google Scholar
• Lotze, H. K., D. P. Tittensor, A. Bryndum-Buchholz, T. D. Eddy, W. W. L. Cheung, E. D. Galbraith, M. Barange, N. Barrier, D. Bianchi, J. L. Blanchard, et al. 2019. Global ensemble projections reveal trophic amplification of ocean biomass declines with climate change. Proceedings of the National Academy of Sciences of the United States of America 116 (26):12907–12. doi: https://doi.org/10.1073/pnas.1900194116.
   PubMed Web of Science ®Google Scholar
• Rhode Island Department of Environmental Management. 2003. The Greenwich Bay fish kill – August 2003: Causes, impacts and responses. Providence, RI DEM. http://www.dem.ri.gov/programs/benviron/water/bart/fishkill-greenwich-bay-2003.pdf.
   Google Scholar
• Mango, L. M., A. M. Melesse, M. E. McClain, D. Gann, and S. G. Setegn. 2011. Land use and climate change impacts on the hydrology of the upper Mara River Basin, Kenya: Results of a modeling study to support better resource management. Hydrology and Earth System Sciences 15 (7):2245–58. doi: https://doi.org/10.5194/hess-15-2245-2011.
   Web of Science ®Google Scholar
• McLeod, K., J. Lubchenco, S. Palumbi, and A. A. Rosenberg. 2005. Scientific consensus statement on marine ecosystem-based management.
   Google Scholar
• Mcmanus, M. C., D. S. Ullman, S. D. Rutherford, and C. Kincaid. 2020. Northern quahog (Mercenaria mercenaria) larval transport and settlement modeled for a temperate estuary. Limnology and Oceanography 65 (2):289–15. doi: https://doi.org/10.1002/lno.11297.
   Web of Science ®Google Scholar
• McNamee, J. E. 2018. A multispecies statistical catch-at-age (MSSCAA) model for a mid-Atlantic species complex. Open Access Dissertations, Paper 758: 288.
   Google Scholar
• Milner-Gulland, E. J. 2012. Interactions between human behaviour and ecological systems. Philosophical Transactions of the Royal Society of London, Series B: Biological Sciences 367 (1586):270–8. doi: https://doi.org/10.1098/rstb.2011.0175.
   PubMed Web of Science ®Google Scholar
• Monaco, M. E., and R. E. Ulanowicz. 1997. Comparative ecosystem trophic structure of three US mid-Atlantic estuaries. Marine Ecology Progress Series 161:239–254.
   Google Scholar
• Nixon, S. W. 1995. Coastal marine eutrophication: A definition, social causes, and future concerns. Ophelia 41 (1):199–219. doi: https://doi.org/10.1080/00785236.1995.10422044.
   Web of Science ®Google Scholar
• Nixon, S. W. 1997. Prehistoric nutrient inputs and productivity in Narragansett Bay. Estuaries 20 (2):253–61. doi: https://doi.org/10.2307/1352341.
   Google Scholar
• Nixon, S. W., B. A. Buckley, S. L. Granger, L. A. Harris, A. J. Oczkowski, R. W. Fulweiler, et al. 2008. Nitrogen and phosphorus inputs to Narragansett Bay: Past, present, and future. In Science for ecosystem-based management: Narragansett Bay in the 21st century, edited by A. Desbonnet and B. A. Costa-Pierce, 101–75. New York: Springer Science.
   Google Scholar
• Nixon, S. W., R. W. Fulweiler, B. A. Buckley, S. L. Granger, B. L. Nowicki, and K. M. Henry. 2009. The impact of changing climate on phenology, productivity, and benthic-pelagic coupling in Narragansett Bay. Estuarine, Coastal and Shelf Science 82 (1):1–18. doi: https://doi.org/10.1016/j.ecss.2008.12.016.
   Web of Science ®Google Scholar
• Nixon, S. W., S. L. Granger, and B. L. Nowicki. 1995. An assessment of the annual mass balance of carbon, nitrogen, and phosphorus in Narragansett Bay. Biogeochemistry 31 (1):15–61. doi: https://doi.org/10.1007/BF00000805.
   Web of Science ®Google Scholar
• Oczkowski, A., C. Schmidt, E. Santos, K. Miller, A. Hanson, D. Cobb, J. Krumholz, A. Pimenta, L. Heffner, S. Robinson, et al. 2018. How the distribution of anthropogenic nitrogen has changed in Narragansett Bay (RI, USA) following major reductions in nutrient loads. Estuaries and Coasts 41 (8):2260–76. doi: https://doi.org/10.1007/s12237-018-0435-2.
   PubMed Web of Science ®Google Scholar
• Olsen, E., G. Fay, S. Gaichas, R. Gamble, S. Lucey, and J. S. Link. 2016. Ecosystem model skill assessment. Yes we can!. PLoS One 11 (1):e0146467. doi: https://doi.org/10.1371/journal.pone.0146467.
   PubMed Web of Science ®Google Scholar
• Oviatt, C. A., A. Keller, and L. Reed. 2002. Annual primary production in Narragansett Bay with no bay-wide winter-spring phytoplankton bloom. Estuarine, Coastal and Shelf Science 54 (6):1013–26. doi: https://doi.org/10.1006/ecss.2001.0872.
   Web of Science ®Google Scholar
• Oviatt, C. A., S. Olsen, M. Andrews, J. Collie, T. Lynch, and K. Raposa. 2003. A century of fishing and fish fluctuations in Narragansett Bay. Reviews in Fisheries Science 11 (3):221–42. doi: https://doi.org/10.1080/10641260390244413.
   Web of Science ®Google Scholar
• Oviatt, C., L. Smith, J. Krumholz, C. Coupland, H. Stoffel, A. Keller, M. C. McManus, and L. Reed. 2017. Managed nutrient reduction impacts on nutrient concentrations, water clarity, primary production, and hypoxia in a north temperate estuary. Estuarine, Coastal and Shelf Science 199:25–34. doi: https://doi.org/10.1016/j.ecss.2017.09.026.
   Web of Science ®Google Scholar
• Palmer, L. 2018. Meeting the leadership challenges for interdisciplinary environmental research. Nature Sustainability 1 (7):330–3. doi: https://doi.org/10.1038/s41893-018-0103-3.
   Web of Science ®Google Scholar
• Park, G. S., and H. G. Marshall. 2000. Estuarine relationships between zooplankton community structure and trophic gradients. Journal of Plankton Research 22 (1):121–36. doi: https://doi.org/10.1093/plankt/22.1.121.
   Web of Science ®Google Scholar
• Pendleton, L., P. King, C. Mohn, D. G. Webster, R. Vaughn, and P. N. Adams. 2011. Estimating the potential economic impacts of climate change on Southern California beaches. Climatic Change 109 (1):277–298.
   Google Scholar
• Pilson, M. E. Q. 1985. On the residence time of water in Narragansett Bay. Estuaries 8 (1):2. doi: https://doi.org/10.2307/1352116.
   Google Scholar
• Rashleigh, B., H. Walker, T. Gleason, M. Abdelrhman, L. Charlestra, E. Dettman, et al. 2015. Quantitative models describing past and current nutrient fluxes and associated ecosystem level responses in the Narragansett Bay Ecosystem. U.S. Environmental Protection Agency, Washington, DC, EPA/600/R-15/174, 1–50.
   Google Scholar
• Rose, K. A., J. I. Allen, Y. Artioli, M. Barange, J. Blackford, F. Carlotti, R. Cropp, U. Daewel, K. Edwards, K. Flynn, et al. 2010. End-to-end models for the analysis of marine ecosystems: Challenges, issues, and next steps. Marine and Coastal Fisheries 2 (1):115–30. doi: https://doi.org/10.1577/C09-059.1.
   Web of Science ®Google Scholar
• Santschi, P. H., M. Amdurer, D. Adler, P. O’Hara, Y.-H. Li, and P. Doering. 1987. Relative mobility of radioactive trace-elements across the sediment-water interface in the MERL model-ecosystems of Narragansett Bay. Journal of Marine Research 45 (4):1007–1048. doi: https://doi.org/10.1357/002224087788327172.
   Web of Science ®Google Scholar
• Santschi, P. H., Y. H. Li, D. M. Adler, M. Amdurer, J. Bell, and U. P. Nyffeler. 1983. The relative mobility of natural (Th, Pb and Po) and fallout (Pu, Am, Cs) radionuclides in the coastal marine environment: Results from model ecosystems (MERL) and Narragansett Bay. Geochimica et Cosmochimica Acta 47 (2):201. doi: https://doi.org/10.1016/0016-7037(83)90133-3.
   Web of Science ®Google Scholar
• Schindler, D. E., and R. Hilborn. 2015. Sustainability. Prediction, precaution, and policy under global change. Science (New York, N.Y.) 347 (6225):953–954. doi: https://doi.org/10.1126/science.1261824.
   PubMed Web of Science ®Google Scholar
• Schmidt, C. E., E. Monroy, M. Cantwell, J. King, and C. Roman. 2020. A synthesis of case studies from Narragansett Bay (RI/MA, USA) emphasizing implementation of the US Clean Water Act using adaptive management. NBEP Technical Report 2020. NBEP-20-228. http://nbep.org/publications/synthesis-report.pdf.
   Google Scholar
• Schumann, S. 2018. Commercial fisheries resilience planning: A tool for industry empowerment. http://resilientfisheriesri.org/planning-guide/.
   Google Scholar
• Shull, D. H. 2001. Transition-matrix model of bioturbation and radionuclide diagenesis. Limnology and Oceanography 46 (4):905–916. doi: https://doi.org/10.4319/lo.2001.46.4.0905.
   Web of Science ®Google Scholar
• Soetaert, K. E. R., and P. Van Rijswijk. 1993. Spatial and temporal patterns of the zooplankton in the Westerschelde estuary. Marine Ecology Progress Series 97:47–59. doi: https://doi.org/10.3354/meps097047.
   Web of Science ®Google Scholar
• Soulié, J. C., and O. Thébaud. 2006. Modeling fleet response in regulated fisheries: An agent-based approach. Mathematical and Computer Modelling 44 (5–6):553–564. doi: https://doi.org/10.1016/j.mcm.2005.02.011.
   Google Scholar
• Steele, J. H. 2012. Prediction, scenarios and insight: The uses of an end-to-end model. Progress in Oceanography 102:67–73. doi: https://doi.org/10.1016/j.pocean.2012.03.005.
   Web of Science ®Google Scholar
• Symes, D., and J. Phillipson. 2009. Whatever became of social objectives in fisheries policy? Fisheries Research 95 (1):1–5. doi: https://doi.org/10.1016/j.fishres.2008.08.001.
   Web of Science ®Google Scholar
• Telesh, I. V., and V. V. Khlebovich. 2010. Principal processes within the estuarine salinity gradient: A review. Marine Pollution Bulletin 61 (4–6):149–155. doi: https://doi.org/10.1016/j.marpolbul.2010.02.008.
   PubMed Web of Science ®Google Scholar
• Tilman, A., S. Levin, and J. Watson. 2018. Revenue-sharing clubs provide economic insurance and incentives for sustainability in common-pool resource systems. Journal of Theoretical Biology 454:205–214. doi: https://doi.org/10.1016/j.jtbi.2018.06.003.
   PubMed Web of Science ®Google Scholar
• Travers, M., Y.-J. Shin, S. Jennings, E. Machu, J. A. Huggett, J. G. Field, and P. M. Cury. 2009. Two-way coupling versus one-way forcing of plankton and fish models to predict ecosystem changes in the Benguela. Ecological Modelling 220 (21):3089–3099. doi: https://doi.org/10.1016/j.ecolmodel.2009.08.016.
   Web of Science ®Google Scholar
• Ullman, D. S., D. L. Codiga, A. Pfeiffer-Herbert, and C. R. Kincaid. 2014. An anomalous near-bottom cross-shelf intrusion of slope water on the southern New England continental shelf. Journal of Geophysical Research: Oceans 119 (3):1739–1753. doi: https://doi.org/10.1002/2013JC009259.
   Web of Science ®Google Scholar
• Ullman, D. S., C. Kincaid, C. Balt, and D. L. Codiga. 2019. Hydrodynamic modeling of Narragansett Bay in support of the EcoGEM ecological model. University of Rhode Island GSO technical report 2019 Jan. Report no. 2019–01.
   Google Scholar
• Vadeboncoeur, M. A., S. P. Hamburg, and D. Pryor. 2010. Modeled nitrogen loading to Narragansett Bay: 1850 to 2015. Estuaries and Coasts 33 (5):1113–1127. doi: https://doi.org/10.1007/s12237-010-9320-3.
   Web of Science ®Google Scholar
• Vaudrey, J. M. P. EcoGEM: Modeling response of hypoxia to changes in nutrient inputs to Narragansett Bay, RI, USA. University of Connecticut Department of Marine Sciences technical report. 2016. Prepared for NOAA-CHRP.
   Google Scholar
• Villa, F., K. Bagstad, G. Johnson, and B. Voigt. 2011. Scientific instruments for climate change adaptation: estimating and optimizing the efficiency of ecosystem service provision.
   Google Scholar
• Wilby, R. L., and R. Keenan. 2012. Adapting to flood risk under climate change. Progress in Physical Geography: Earth and Environment 36 (3):348–378. doi: https://doi.org/10.1177/0309133312438908.
   Google Scholar