Publication Cover
Biofouling
The Journal of Bioadhesion and Biofilm Research
Volume 26, 2010 - Issue 3
570
Views
2
CrossRef citations to date
0
Altmetric
Original Articles

The uronic acids assay: a method for the determination of chemical activity on biofilm EPS

&
Pages 301-312 | Received 07 Jun 2009, Accepted 20 Nov 2009, Published online: 19 Jan 2010

References

  • Bardouniotis , E , Ceri , H and Olson , M E . 2003 . Biofilm formation and biocide susceptibility testing of Mycobacterium fortuitum and Mycobacterium marinum . Curr Microbiol , 46 : 28 – 32 .
  • Becerro , M A , Lopez , N I , Turon , X and Uriz , M J . 1994 . Antimicrobial activity and surface bacterial film in marine sponges . J Exp Mar Biol Ecol , 179 : 195 – 205 .
  • Blumenkrantz , N and Asboe-Hansen , G . 1973 . New method for quantitative determination of uronic acids . Anal Biochem , 54 : 484 – 489 .
  • Cano , R J and Colome , J S . 1986 . Microbiology , St Paul Minnesota : West Publishing Company .
  • Ceri , H , Olson , M E , Stremick , C , Read , R R , Morck , D and Buret , A . 1999 . The Calgary biofilm device: new technology for rapid determination of antibiotic susceptibilities of bacterial biofilms . J Clin Microbiol , 37 : 1771 – 1776 .
  • Costerton , J W . 1995 . Overview of microbial biofilms . J Ind Microbiol , 15 : 137 – 140 .
  • Costerton , J W , Lewandowski , Z , DeBeer , D , Caldwell , D , Korber , D and James , G . 1994 . Biofilm, the customized microniche . J Bacteriol , 176 : 2137 – 2142 .
  • Dang , H and Lovell , C R . 2000 . Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16s rRNA genes . Appl Environ Microbiol , 66 : 467 – 475 .
  • Davey , M E and O'Toole , G A . 2000 . Microbial biofilms: from ecology to molecular genetics . Microbiol Mol Biol R , 64 : 847 – 867 .
  • Dobretsov , S V and Qian , P . 2002 . Effect of Bacteria associated with the green alga Ulva reticulata on marine micro- and macrofouling . Biofouling , 18 : 217 – 228 .
  • de Saravia , S GG and de Mele , M FL . 2003 . Non-invasive methods for monitoring biofilm growth in industrial water systems . Latin Am Appl Res , 33 : 353 – 359 .
  • Dobretsov , S , Dahms , H U , YiLi , H , Wahl , M and Qian , P . 2007 . The effect of quorum-sensing blockers on the formation of marine microbial communities and larval attachment . FEMS Microbiol Ecol , 60 : 177 – 188 .
  • Filisetti-Cozzi , T MCC and Carpita , N C . 1991 . Measurement of uronic acids without interference from neutral sugars . Anal Biochem , 197 : 157 – 162 .
  • Gram , L , de Nys , R , Maximilien , R , Givskov , M , Steinberg , P D and Kjelleberg , S . 1996 . Inhibitory effects of secondary metabolites from the red alga Delisea pulchra on swarming motility of Proteus mirabilis . Appl Environ Microbiol , 62 : 4284 – 4287 .
  • Hall-Stoodley , L and Stoodley , P . 2005 . Biofilm formation and dispersal and the transmission of human pathogens . Trends Microbiol , 13 : 7 – 10 .
  • Hall-Stoodley , L , Costerton , J W and Stoodley , P . 2004 . Bacterial biofilms: from the natural environment to infectious diseases . Nat Rev , 2 : 95 – 108 .
  • Harrison , J J , Turner , R J and Ceri , H . 2005 . High-throughput metal susceptibility testing of microbial biofilms . BMC Microbiol , 5 : 53
  • Hentzer , M , Riedel , K , Rasmussen , T B , Heydorn , A , Andersen , J B , Parsek , M R , Rice , S A , Eberl , L , Molin , S Hoiby , N . 2002 . Inhibition of quorum sensing in Pseudomonas aeruginosa biofilm bacteria by a halogenated furanone compound . Microbiology , 148 : 87 – 102 .
  • Huang , S and Hadfield , M G . 2003 . Composition and density of bacterial biofilms determine larval settlement of the polychaete Hydroides elegans . Mar Ecol Prog Ser , 260 : 161 – 172 .
  • Itoh , Y , Wang , X , Hinnebusch , B J , Preston , I II JF and Romeo , T . 2005 . Depolymerization of β−1,6−N–acetyl-D-glucosamine disrupts the integrity of diverse bacterial biofilms . J Bacteriol , 187 : 382 – 387 .
  • Jain , A and Bhosle , N B . 2008 . Role of β 1-4 linked polymers in the biofilm structure of marine Pseudomonas sp. CE-2 on 304 stainless steel coupons . Biofouling , 24 : 283 – 290 .
  • Johansen , J E , Nielsen , P and Sjoholm , C . 1999 . Description of Cellulophaga baltica gen. nov., sp. nov. and Cellulophaga fucicola gen. nov., sp. nov. and reclassification of [Cytophaga] lytica to Cellulophaga lytica gen. nov., comb. nov . Int J Syst Bacteriol , 49 : 1231 – 1240 .
  • Johnson , M D , Simons , E A and Lambert , R JW . 2000 . One explanation for the variability of the bacterial suspension test . J Appl Microbiol , 88 : 237 – 242 .
  • Lee , O O and Qian , P Y . 2004 . Potential control of bacterial epibiosis on the surface of the sponge Mycale adhaerens . Aquat Microb Ecol , 34 : 11 – 21 .
  • Lee , O O , Yang , L H , Li , X , Pawlik , J R and Qian , P . 2007 . Surface bacterial community, fatty acid profile, and antifouling activity of two congeneric sponges from Hong Kong and the Bahamas . Mar Ecol Prog Ser , 339 : 25 – 40 .
  • Lee , Y K , Lee , J H and Lee , H K . 2001 . Microbial symbiosis in marine sponges . J Microbiol , 39 : 254 – 264 .
  • Maximilien , R , de Nys , R , Holmstrom , C , Gram , P , Kjelleberg , S and Steinberg , P D . 1998a . Bacterial fouling is regulated by secondary metabolites from the red alga Delisea pulchra . Aquat Microb Ecol , 15 : 233 – 246 .
  • Maximilien , R , de Nys , R , Holmstrom , C , Gram , L , Givskov , M , Crass , K , Kjelleberg , S and Steinberg , P D . 1998b . Chemical mediation of bacterial surface colonisation by secondary metabolites from the red alga Delisea pulchra . Aquat Microb Ecol , 15 : 233 – 246 .
  • Mojica , K , Elsey , D and Cooney , M J . 2007 . Quantitative analysis of biofilm EPS uronic acid content . J Microbiol Meth , 71 : 61 – 65 .
  • Moskowitz , S M , Foster , J M , Emerson , J and Burns , J L . 2004 . Clinically feasible biofilm susceptibility assay for isolates of Pseudomonas aeruginosa from patients with cystic fibrosis . J Clin Microbiol , 42 : 1915 – 1922 .
  • Nobile , C J and Mitchell , A P . 2007 . Microbial biofilms: e pluribus unum . Curr Biol , 17 : R349 – R353 .
  • Parsek , M R and Singh , P K . 2003 . Bacterial biofilms: an emerging link to disease pathogenesis . Annu Rev Microbiol , 57 : 677 – 701 .
  • Rasmussen , T B , Manefield , M , Andersen , J B , Eberl , L , Anthoni , U , Christophersen , C , Steinberg , P , Kjelleberg , S and Givskov , M . 2000 . How Delisea pulchra furanones affect quorum sensing and swarming motility in Serratia liquefaciens MG1 . Microbiology , 146 : 3237 – 3244 .
  • Ren , D , Sims , J J and Wood , T K . 2001 . Inhibition of biofilm formation and swarming of Escherichia coli by (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone . Environ Microbiol , 3 : 731 – 736 .
  • Ren , D , Sims , J J and Wood , T K . 2002 . Inhibition of biofilm formation and swarming of Bacillus subtilis by (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone . Lett Appl Microbiol , 34 : 293 – 299 .
  • Ren , D , Bedzyk , L A , Setlow , P , England , D F , Kjelleberg , S , Thomas , S M , Ye , R W and Wood , T K . 2004 . Differential gene expression to investigate the effect of (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone on Bacillus subtilis . Appl Environ Microbiol , 70 : 4941 – 4949 .
  • Sutherland , I W . 2001 . Biofilm exopolysaccharides: a strong and sticky framework . Microbiology , 147 : 3 – 9 .
  • van den Hoogen , B M , van Weeren , P R , Lopes-Cardozo , M , van Golde , L MG , Barneveld , A and van de Lest , C HA . 1998 . A microtiter plate assay for the determination of uronic acids . Anal Biochem , 257 : 107 – 111 .
  • Walters , L J , Hadfield , M G and Smith , C M . 1996 . Waterborne chemical compounds in tropical microalgae: positive and negative cues for larval settlement . Mar Biol , 126 : 383 – 393 .
  • Webb , J S , Givskov , M and Kjelleberg , S . 2003 . Bacterial biofilms: prokaryotic adventures in multicellularity . Curr Opin Microbiol , 6 : 578 – 585 .
  • WHO . 2006 . Collecting, preserving and shipping specimens for the diagnosis of avian influenza A(H5N1) virus infection. Guide for field operations. World Health Organization [cited Oct 2006]. Available from: www. who.int/entity/csr/resources/publications/surveillance/Annex7.pdf
  • Wiatr , C . 1991 . Enzyme blend containing cellulase to control industrial slime , USA : Nalco Chemical Company .
  • Wicker , L and Leiting , V A . 1995 . Microscale galacturonic acid assay . Anal Biochem , 229 : 148 – 150 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.