The chromodomain-containing histone acetyltransferase TIP60 acts as a code reader, recognizing the epigenetic codes for initiating transcription

References

• Kamine J, Elangovan B, Subramanian T, Coleman D, Chinnadurai G. Identification of a cellular protein that specifically interacts with the essential cysteine region of the HIV-1 Tat transactivator. Virology. 1996;216:357–366.10.1006/viro.1996.0071
   PubMed Web of Science ®Google Scholar
• Yang XJ. The diverse superfamily of lysine acetyltransferases and their roles in leukemia and other diseases. Nucleic Acids Res. 2004;32:959–976.10.1093/nar/gkh252
   PubMed Web of Science ®Google Scholar
• Kimura A, Horikoshi M. Tip60 acetylates six lysines of a specific class in core histones in vitro. Genes Cells. 1998;3:789–800.10.1046/j.1365-2443.1998.00229.x
   PubMed Web of Science ®Google Scholar
• Brady ME, Ozanne DM, Gaughan L, Waite I, Cook S, Neal DE, Robson CN. Tip60 is a nuclear hormone receptor coactivator. J. Biol. Chem. 1999;274:17599–17604.10.1074/jbc.274.25.17599
   PubMed Web of Science ®Google Scholar
• Kim JW, Jang SM, Kim CH, An JH, Choi KH. Transcriptional activity of neural retina leucine zipper (Nrl) is regulated by c-Jun N-terminal kinase and Tip60 during retina development. Mol. Cell Biol. 2012;32:1720–1732.10.1128/MCB.06440-11
   PubMed Web of Science ®Google Scholar
• Kim CH, Kim JW, Jang SM, An JH, Song KH, Choi KH. Transcriptional activity of paired homeobox Pax6 is enhanced by histone acetyltransferase Tip60 during mouse retina development. Biochem. Biophys. Res. Commun. 2012;424:427–432.10.1016/j.bbrc.2012.06.126
   PubMed Web of Science ®Google Scholar
• Kim JW, Jang SM, Kim CH, An JH, Kang EJ, Choi KH. Tip60 regulates myoblast differentiation by enhancing the transcriptional activity of MyoD via their physical interactions. FEBS J. 2011;278:4394–4404.10.1111/j.1742-4658.2011.08362.x
   PubMed Web of Science ®Google Scholar
• Kim JW, Jang SM, Kim CH, An JH, Kang EJ, Choi KH. New molecular bridge between RelA/p65 and NF-kappaB target genes via histone acetyltransferase TIP60 cofactor. J. Biol. Chem. 2012;287:7780–7791.10.1074/jbc.M111.278465
   PubMed Web of Science ®Google Scholar
• Sykes SM, Mellert HS, Holbert MA, Li K, Marmorstein R, Lane WS, McMahon SB. Acetylation of the p53 DNA-binding domain regulates apoptosis induction. Mol. Cell. 2006;24:841–851.10.1016/j.molcel.2006.11.026
   PubMed Web of Science ®Google Scholar
• Xiao H, Chung J, Kao HY, Yang YC. Tip60 is a co-repressor for STAT3. J. Biol. Chem. 2003;278:11197–11204.10.1074/jbc.M210816200
   PubMed Web of Science ®Google Scholar
• Gavaravarapu S, Kamine J. Tip60 inhibits activation of CREB protein by protein kinase A. Biochem. Biophys. Res. Commun. 2000;269:758–766.10.1006/bbrc.2000.2358
   PubMed Web of Science ®Google Scholar
• Kim JW, Song PI, Jeong MH, An JH, Lee SY, Jang SM, Song KH, Armstrong CA, Choi KH. TIP60 represses transcriptional activity of p73beta via an MDM2-bridged ternary complex. J. Biol. Chem. 2008;283:20077–20086.10.1074/jbc.M800161200
   PubMed Web of Science ®Google Scholar
• Kornberg RD. Chromatin structure: a repeating unit of histones and DNA. Science. 1974;184:868–871.10.1126/science.184.4139.868
   PubMed Web of Science ®Google Scholar
• Thomas JO, Kornberg RD. An octamer of histones in chromatin and free in solution. Proc. Nat. Acad. Sci. USA. 1975;72:2626–2630.10.1073/pnas.72.7.2626
   PubMed Web of Science ®Google Scholar
• Jenuwein T, Allis CD. Translating the histone code. Science. 2001;293:1074–1080.10.1126/science.1063127
   PubMed Web of Science ®Google Scholar
• Zentner GE, Henikoff S. Regulation of nucleosome dynamics by histone modifications. Nat. Struct. Mol. Biol. 20:259–266.
   PubMed Web of Science ®Google Scholar
• Sapountzi V, Logan IR, Robson CN. Cellular functions of TIP60. Int. J. Biochem. Cell Biol. 2006;38:1496–1509.10.1016/j.biocel.2006.03.003
   PubMed Web of Science ®Google Scholar
• Sun Y, Jiang X, Price BD. Tip60: connecting chromatin to DNA damage signaling. Cell Cycle. 2010;9:930–936.10.4161/cc.9.5.10931
   PubMed Web of Science ®Google Scholar
• Hu Y, Fisher JB, Koprowski S, McAllister D, Kim MS, Lough J. Homozygous disruption of the Tip60 gene causes early embryonic lethality. Dev. Dyn. 2009;238:2912–2921.10.1002/dvdy.v238:11
   PubMed Web of Science ®Google Scholar
• Nielsen PR, Nietlispach D, Mott HR, Callaghan J, Bannister A, Kouzarides T, Murzin AG, Murzina NV, Laue ED. Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9. Nature. 2002;416:103–107.10.1038/nature722
   PubMed Web of Science ®Google Scholar
• Pray-Grant MG, Daniel JA, Schieltz D, Yates JR, Grant PA 3rd. Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature. 2005;433:434–438.10.1038/nature03242
   PubMed Web of Science ®Google Scholar
• Sun Y, Jiang X, Xu Y, Ayrapetov MK, Moreau LA, Whetstine JR, Price BD. Histone H3 methylation links DNA damage detection to activation of the tumour suppressor Tip60. Nat. Cell Biol. 2009;11:1376–1382.10.1038/ncb1982
   PubMed Web of Science ®Google Scholar
• Nowak SJ, Corces VG. Phosphorylation of histone H3: a balancing act between chromosome condensation and transcriptional activation. Trends Genet. 2004;20:214–220.10.1016/j.tig.2004.02.007
   PubMed Web of Science ®Google Scholar
• Rossetto D, Avvakumov N, Cote J. Histone phosphorylation: a chromatin modification involved in diverse nuclear events. Epigenetics. 7:1098–1108.
   PubMed Web of Science ®Google Scholar