2,257
Views
19
CrossRef citations to date
0
Altmetric
Original Articles

Morphological and molecular characteristics of selected species of Minidiscus (Bacillariophyta, Thalassiosiraceae)

, , &
Pages 461-475 | Received 18 Jul 2008, Accepted 20 Feb 2009, Published online: 21 Aug 2009

References

  • Aizawa , C , Tanimoto , M and Jordan , RW . 2005 . Living diatom assemblages from North Pacific and Bering Sea surface waters during summer 1999 . Deep-Sea Res. (2 Top. Stud. Oceanogr.) , 52 : 2186 – 2205 .
  • Aké-Castillo , JA , Hernández-Becerril , ME , Del Castillo , MEM and Bravo-Sierra , E . 2001 . Species of Minidiscus (Bacillariophyceae) in Mexican Pacific Ocean . Cryptogam. Algol. , 22 : 101 – 107 .
  • Amato , A , Kooistra , WHCF , Ghiron , JHL , Mann , DG , Pröschold , T and Montresor , M . 2007 . Reproductive isolation among sympatric cryptic species in marine diatoms . Protist , 158 : 193 – 207 .
  • Andersen , RA . 2005 . Algal Culturing Techniques , Amsterdam, , The Netherlands : Elsevier .
  • Behnke , A , Friedl , T , Chepurnov , VA and Mann , DG . 2004 . Reproductive compatibility and rDNA sequence analysis in the Sellaphora pupula species complex (Bacillariophyta) . J. Phycol. , 40 : 193 – 208 .
  • Bérard-Therriault , L , Cardinal , A and Poulin , M . 1986 . Les Diatomées (Bacillariophyceae) benthiques de substrats durs des eaux marines et saumâtres du Québec . Nat. Can. , 114 : 81 – 103 .
  • Bérard-Therriault , L , Poulin , M and Bossé , L . 1999 . Guide d’identification du phytoplancton marin de l’estuaire et du golfe du Saint-Laurent incluant également certains protozoaires . Publ. Spec. Can. Sci. Halieut. Aquat. , 128 : 1 – 387 .
  • Biegala , IC , Not , F , Vaulot , D and Simon , N . 2003 . Quantitative assessment of picoeukaryotes in the natural environment by using taxon-specific oligonucleotide probes in association with pyrimidine signal amplification-fluorescence in situ hybridization and flow cytometry . Appl. Environ. Microbiol. , 69 : 5519 – 5529 .
  • Buck , KR , Chavez , FP and Davis , AS . 2008 . Minidiscus trioculatus, a small diatom with a large presence in the upwelling system of central California . Nova Hedwig. Beih. , 133 : 1 – 6 .
  • Cheng , Z , Gao , Y and Liu , S . 1993 . Nanodiatoms from Fujian Coast , Beijing, , China : China Ocean Press .
  • Coleman , AW . 2007 . Pan–eukaryote ITS2 homologies revealed by RNA secondary structure . Nucl. Acids Res. , 35 : 3322 – 3329 .
  • Duffy , JE and Stachowicz , JJ . 2006 . Why biodiversity is important to oceanography; potential roles of genetic, species and trophic diversity in pelagic ecosystem processes . Mar. Ecol. Prog. Ser. , 311 : 179 – 189 .
  • Elwood , HJ , Olsen , GJ and Sogin , ML . 1985 . The small subunit ribosomal RNA gene sequences from the hypotrichous ciliate Oxytricha nova and Stylonychia pustulata . Mol. Biol. Evol. , 2 : 399 – 410 .
  • Evans , KM , Wortley , AH , Simpson , GE , Chepurnov , VA and Mann , DG . 2008 . A molecular systematic approach to explore diversity within the Sellophora pupula species complex (Bacillariophyta) . J. Phycol. , 44 : 215 – 231 .
  • Feliner , GN and Rosseló , JA . 2007 . Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants . Mol. Phylogenet. Evol. , 44 : 911 – 919 .
  • Fukuyo , Y , Takano , H , Chihara , M and Matsuoka , K . 1990 . Red Tide Organisms in Japan–An Illustrated Guide , Tokyo, , Japan : Uchida Rokakuho .
  • Guillard , RRL . 1975 . “ Culture of phytoplankton for feeding marine invertebrates ” . In Culture of Marine Invertebrate Animals , Edited by: Smith , WL and Chanley , MH . 26 – 60 . New York (NY), , USA : Plenum Press .
  • Hallegraeff , GM . 1984 . Species of the diatom genus Thalassiosira in Australian waters . Bot. Mar. , 27 : 495 – 513 .
  • Hargraves , PE , Vaillancourt , RD and Jolly , GA . 1989 . “ Autotrophic picoplankton in Narragansett Bay and their interaction with microplankton ” . In Novel Phytoplankton Blooms: Causes and Impacts of Recurrent Tides and Other Unusual Blooms , Edited by: Casper , EM , Carpenter , EJ and Bricelj , M . 23 – 38 . New York (NY), , USA : Springer Verlag .
  • Hasle , GR . 1973a . Thalassiosiraceae, a new diatom family . Nor. J. Bot. , 20 : 67 – 69 .
  • Hasle , GR . 1973b . Some marine plankton genera of the diatom family Thalassiosiraceae . Nova Hedwig. Beih. , 45 : 1 – 49 .
  • Hasle , GR . 1978 . “ Using the inverted microscope ” . In Phytoplankton Manual , Edited by: Sournia , A . 191 – 196 . Paris, , France : UNESCO .
  • Hendriks , L , Goris , A , Neefs , JM , Vandepeer , Y , Hennebert , G and Dewatcher , R . 1989 . The nucleotide sequence of the small ribosomal-subunit RNA of the yeast Candida albicans and the evolutionary position of the fungi among the eukaryotes . Syst. Appl. Microbiol. , 12 : 223 – 229 .
  • Irigoien , X , Harris , RP , Verheye , HM , Joly , P , Runge , J , Starr , M , Pond , D , Campbell , R , Shreeve , R , Ward , P , Smith , AN , Dam , HG , Peterson , W , Tirelli , V , Koski , M , Smith , T , Harbour , D and Davidson , R . 2002 . Copepod hatching success in marine ecosystems with high diatom concentrations . Nature (Lond.) , 419 : 387 – 389 .
  • Kaczmarska , I , Legresley , MM , Martin , JL and Ehrman , JM . 2005 . Diversity of the diatom Pseudo-nitzschia Peragallo in the Quoddy Region of the Bay of Fundy, Canada . Harmful Algae , 4 : 1 – 19 .
  • Kaczmarska , I , Reid , C , Martin , JL and Moniz , M . 2008 . Morphological, biological and molecular characteristics of Pseudo-nitzschia delicatissima from the Canadian Maritimes . Can. J. Bot. , 86 : 763 – 772 .
  • Kang , J-S , Kang , S-H , Kim , D and Kim , D-Y . 2003 . Planktonic centric diatom Minidiscus chilensis dominated sediment trap material in eastern Bransfield Strait, Antarctica . Mar. Ecol. Prog. Ser. , 255 : 93 – 99 .
  • Komuro , C , Narita , H , Imani , K , Nojiri , Y and Jordan , RW . 2005 . Microplankton assemblages at Station KNOT in the subarctic western Pacific, 1999–2000 . Deep-Sea Res. (2 Top. Stud. Oceanogr.) , 52 : 2206 – 2217 .
  • Kühn , SF . 1998 . Infection of Coscinodiscus spp. by the parasitoid nanoflagellate Pirsonia diadema: II. Selective infection behaviour for host species and individual host cells . J. Plankton Res. , 20 : 443 – 454 .
  • Lange , KB . 1985 . Spatial and seasonal variations of diatom assemblages off the Argentinean coast (South Western Atlantic) . Oceanol. Acta , 8 : 361 – 369 .
  • López-García , P , Rodrígues-Valera , F , Pedrós-Alió , C and Moreira , D . 2001a . Unexpected diversity of small eukaryotes in deep-sea Antarctic plankton . Nature (Lond.) , 409 : 603 – 607 .
  • López-García , P , López-López , A , Moreira , D and Rodríguez-Valera , F . 2001b . Diversity of free-living prokaryotes from a deep-sea site at the Antarctic Polar Front . FEMS Microbiol. Ecol. , 36 : 193 – 202 .
  • Lovejoy , C , Massana , R and Pedrós-Alió , C . 2006 . Diversity and distribution of marine microbial eukaryotes in the Arctic Ocean and adjacent seas . Appl. Environ. Microbiol. , 72 : 3085 – 3095 .
  • Lundholm , N and Hasle , GR . 2008 . Are Fragilariopsis cylindrus and Fragilariopsis nana bipolar diatoms?–Morphological and molecular analyses of two sympatric species . Nova Hedwig. Beih. , 133 : 231 – 250 .
  • Mann , DG . 1994 . “ The origins of shape and form in diatoms: the interplay between morphogenetic studies and systematics ” . In Shape and Form in Plants and Fungi , Edited by: Fugraru , DS and Hudson , AJ . 17 – 38 . London, , UK : Academic Press .
  • Martin-Cereceda , M , Novarino , G and Young , JR . 2003 . Grazing Prymnesium parvum on small planktonic diatoms . Aquat. Microb. Ecol. , 33 : 191 – 199 .
  • McCallum , FS and Maden , BE . 1985 . Human 18S ribosomal-RNA sequence inferred from DNA sequence variations in 18S sequences and secondary modification patterns between vertebrates . Biochem. J. , 232 : 725 – 733 .
  • Moon van der Staay , SY , De Wachter , R and Vaulot , D . 2001 . Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity . Nature (Lond.) , 409 : 607 – 610 .
  • Pouchou , JL and Pichoir , F . 1991 . “ Quantitative analysis of homogeneous or stratified microvolumes applying the model “PAP” . In Electron Probe Quantitation , Edited by: Heinrich , KFJ and Newbury , DE . 31 – 75 . New York (NY), , USA : Plenum Press .
  • Potvin , M and Lovejoy , C . 2009 . PCR-based diversity estimates of artificial and environmental 18S rRNA gene libraries . J. Eukaryot. Microbiol. , 56 : 174 – 181 .
  • Quiroga , I and Chrétiennot-Dinet , MJ . 2004 . A new species of Minidiscus (Diatomophyceae, Thalassiosiraceae) from the eastern English Channel, France . Bot. Mar. , 47 : 341 – 348 .
  • Rippka , R , Coursin , T , Hess , W , Lichtle , C , Scanlan , DJ , Palinska , KA , Iteman , I , Partensky , F , Houmard , J and Herdman , M . 2000 . Prochlorococcus marinus Chisholm et al. 1992 subsp. pastoris subsp. nov. strain PCC 9511, the first axenic chlorophyll a2/b2-containing cyanobacterium (Oxyphotobacteria) . Int. J. Syst. Evol. Microbiol. , 50 : 1833 – 1847 .
  • Rivera , P and Koch , P . 1984 . “ Contribution to diatom flora of Chile II ” . In Proceedings of the 7th International Diatom Symposium , Edited by: Mann , DG . 279 – 298 . Koenigstein, , Germany : O. Koeltz .
  • Sancetta , C . 1990 . Occurrence of Thalassiosiraceae (Bacillariophyceae) in two fjords of British Columbia . Nova Hedwig. Beih. , 100 : 199 – 215 .
  • Sarno , D , Kooistra , WCHF , Medlin , LK , Percopo , I and Zingone , A . 2005 . Diversity in the genus Skeletonema (Bacillariophyceae). II. An assessment of the taxonomy of S. costatum-like species with the description of four new species . J. Phycol. , 41 : 151 – 176 .
  • Sherr , EB and Sherr , BF . 2007 . Heterotrophic dinoflagellates: a significant component of microzooplankton biomass and major grazers of diatoms in the sea . Mar. Ecol. Prog. Ser. , 352 : 187 – 197 .
  • Sournia , A . 1978 . Phytoplankton Manual. Monographs on Oceanographic Methodology 6 , Paris, , France : UNESCO .
  • Stathum , PJ . 1979 . Measurement and use of peak-to-background ratios in X-ray analysis . Microchim. Acta. (Suppl.) , 8 : 229 – 242 .
  • Takano , H . 1981a . New and rare diatoms from Japanese marine waters. VI. Three new species in Thalassiosiraceae . Bull. Takai Reg. Fish. Res. Lab. , 106 : 31 – 43 .
  • Takano , H . 1981b . New and rare diatoms from Japanese marine waters. VII. Ten species from neritic waters . Bull. Takai Reg. Fish. Res. Lab. , 105 : 45 – 57 .
  • Takano , H . 1990 . “ Diatoms ” . In Red Tide Organisms in Japan–An Illustrated Taxonomic Guide , Edited by: Fukuyo , Y , Takano , H , Chihara , M and Matsouka , K . 162 – 331 . Tokyo, , Japan : Uchida Rokakuho .
  • Taylor , JR . 1967 . Phytoplankton of the South Western Indian Ocean . Nova Hedwig. Beih. , 12 : 433 – 476 .
  • Thornhill , DJ , Lajeunesse , TC and Santos , SR . 2007 . Measuring rDNA diversity in eukaryotic microbial systems: how intragenomic variation, pseudogenes, and PCR artifacts confound biodiversity estimates . Mol. Ecol. , 16 : 5326 – 5340 .
  • Tomas , CR . 1997 . Identifying Marine Phytoplankton , San Diego : Academic Press .
  • Urban , JL , Mckenzie , CH and Deibel , D . 1993 . Nanoplankton found in fecal pellets of macrozooplankton in Coastal Newfoundland waters . Bot. Mar. , 36 : 267 – 281 .
  • Van der Auwera , G , Chapelle , S and De Wachter , R . 1994 . Structure of large ribosomal subunit RNA of Phytophthora megasperma and phylogeny of oomycetes . FEBS Lett. , 338 : 133 – 136 .
  • White , TJ , Bruns , T , Lee , S and Taylor , J . 1990 . “ Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics ” . In PCR Protocols: A Guide to Methods and Application , Edited by: Innis , MA , Gelfand , DH , Sninsky , JJ and White , JT . 315 – 322 . San Diego (CA), , USA : Academic Press .
  • Vaulot , D . 2008 . The diversity of small eukaryotic phytoplankton (<3 µm) in marine ecosystems . FEMS Microbiol. Rev. , 32 : 795 – 820 .
  • Wyckmans , M , Chepurnov , VA , Vanreusel , A and De Troch , M . 2007 . Effects of food diversity on diatom selection by harpacticoid copepods . J. Exp. Mar. Biol. Ecol. , 345 : 119 – 128 .

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.